BLASTX nr result

ID: Coptis23_contig00017229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017229
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269134.1| PREDICTED: vesicle-associated membrane prote...   108   6e-22
ref|NP_001062495.1| Os08g0558600 [Oryza sativa Japonica Group] g...   106   2e-21
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...   106   2e-21
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...   106   2e-21
ref|XP_004170493.1| PREDICTED: vesicle-associated membrane prote...   105   5e-21

>ref|XP_002269134.1| PREDICTED: vesicle-associated membrane protein 727 isoform 1 [Vitis
           vinifera] gi|296086578|emb|CBI32213.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/76 (72%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   FNFLIDSGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSEGPHPLA--XXXXXX 175
           FNFLIDSGFVFLVV DE+ GR  PFVFL+RVKDDFKQRYG SI S+GPHPLA        
Sbjct: 55  FNFLIDSGFVFLVVADESAGRGAPFVFLERVKDDFKQRYGGSIRSDGPHPLADEDDDDDD 114

Query: 176 XXXXRFSIAYNLDREF 223
               RFSIAYNLDREF
Sbjct: 115 LFEDRFSIAYNLDREF 130


>ref|NP_001062495.1| Os08g0558600 [Oryza sativa Japonica Group]
           gi|45736098|dbj|BAD13129.1| putative vesicle-associated
           membrane protein 725 (AtVAMP725) [Oryza sativa Japonica
           Group] gi|113624464|dbj|BAF24409.1| Os08g0558600 [Oryza
           sativa Japonica Group] gi|215694990|dbj|BAG90181.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|215740804|dbj|BAG96960.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 241

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/76 (72%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   FNFLIDSGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSEGPHPLA--XXXXXX 175
           FNFL+D GFVFLVV DEAVGRSVPFVFLDRVK+DF QRYG+SI  EG HPLA        
Sbjct: 57  FNFLVDRGFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLADDADDDDF 116

Query: 176 XXXXRFSIAYNLDREF 223
               RFSIAYNLDREF
Sbjct: 117 LLEDRFSIAYNLDREF 132


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/76 (72%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   FNFLIDSGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSEGPHPLA--XXXXXX 175
           FNFL+D GFVFLVV DEAVGRSVPFVFLDRVK+DF QRYG+SI  EG HPLA        
Sbjct: 57  FNFLVDRGFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLADDADDDDF 116

Query: 176 XXXXRFSIAYNLDREF 223
               RFSIAYNLDREF
Sbjct: 117 LLEDRFSIAYNLDREF 132


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/76 (72%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   FNFLIDSGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSEGPHPLA--XXXXXX 175
           FNFL+D GFVFLVV DEAVGRSVPFVFLDRVK+DF QRYG+SI  EG HPLA        
Sbjct: 57  FNFLVDRGFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLADDADDDDF 116

Query: 176 XXXXRFSIAYNLDREF 223
               RFSIAYNLDREF
Sbjct: 117 LLEDRFSIAYNLDREF 132


>ref|XP_004170493.1| PREDICTED: vesicle-associated membrane protein 727-like [Cucumis
           sativus]
          Length = 175

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/75 (69%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   FNFLIDSGFVFLVVVDEAVGRSVPFVFLDRVKDDFKQRYGASIGSEGPHPLA-XXXXXXX 178
           FNFL+DSGFVFL V DE+VGR++PFVFLDRVKDDFKQRYG+SI  E PHPLA        
Sbjct: 55  FNFLLDSGFVFLAVADESVGRNMPFVFLDRVKDDFKQRYGSSIKDENPHPLADDEDDDDL 114

Query: 179 XXXRFSIAYNLDREF 223
              RFS+AY LDREF
Sbjct: 115 FLDRFSVAYTLDREF 129


Top