BLASTX nr result

ID: Coptis23_contig00016970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016970
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161639.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    62   1e-07
ref|XP_004145403.1| PREDICTED: uncharacterized protein LOC101206...    62   1e-07
emb|CBI32523.3| unnamed protein product [Vitis vinifera]               61   2e-07
ref|XP_002519124.1| GTP-binding  protein alpha subunit, gna, put...    59   7e-07
ref|XP_002313077.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06

>ref|XP_004161639.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101224861 [Cucumis sativus]
          Length = 897

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
 Frame = +3

Query: 162 MKGLLRKMIPIPQTHSIPDEEEEHVA-VGEYSFATEYVGPPVNYELLPKAVPIDMKKIPT 338
           M G+L+K+      H  P     HV   GEYSFA EY GP ++YE +P+AVPI++  IPT
Sbjct: 1   MAGILKKLF-----HEKPSSPVNHVDFTGEYSFAMEYKGPGISYE-IPRAVPINVDYIPT 54

Query: 339 ATI-----SSSGNTNLLTVVQPIEKR-QIIDLPSPKSVITSGVE 452
           A++       S + + L V+QPI K+ +     SP SVI+S  E
Sbjct: 55  ASVVLSSSQFSDDLSSLPVIQPIVKKLKKGSSSSPNSVISSTSE 98


>ref|XP_004145403.1| PREDICTED: uncharacterized protein LOC101206537 [Cucumis sativus]
           gi|449470614|ref|XP_004153011.1| PREDICTED:
           uncharacterized protein LOC101202880 [Cucumis sativus]
          Length = 897

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
 Frame = +3

Query: 162 MKGLLRKMIPIPQTHSIPDEEEEHVA-VGEYSFATEYVGPPVNYELLPKAVPIDMKKIPT 338
           M G+L+K+      H  P     HV   GEYSFA EY GP ++YE +P+AVPI++  IPT
Sbjct: 1   MAGILKKLF-----HEKPSSPVNHVDFTGEYSFAMEYKGPGISYE-IPRAVPINVDYIPT 54

Query: 339 ATI-----SSSGNTNLLTVVQPIEKR-QIIDLPSPKSVITSGVE 452
           A++       S + + L V+QPI K+ +     SP SVI+S  E
Sbjct: 55  ASVVLSSSQFSDDLSSLPVIQPIVKKLKKGSSSSPNSVISSTSE 98


>emb|CBI32523.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
 Frame = +3

Query: 162 MKGLLRKMIP-IPQTHSIPDEEEEHVAVGEYSFATEYVGPPVNYELLPKAVPIDMKKIPT 338
           M G LRK++P +P  H   D+++ H ++ EYSFA EY GPPV Y+ +P AVP+D+ ++PT
Sbjct: 1   MAGFLRKLLPTLPSNH---DDDDNHHSM-EYSFAMEYHGPPVTYD-VPLAVPVDIDQVPT 55

Query: 339 ATI---SSSGNTNLLTVVQPI 392
           A     +S  + + + V+QPI
Sbjct: 56  AAAVVSASLVDNSSVPVIQPI 76


>ref|XP_002519124.1| GTP-binding  protein alpha subunit, gna, putative [Ricinus
           communis] gi|223541787|gb|EEF43335.1| GTP-binding
           protein alpha subunit, gna, putative [Ricinus communis]
          Length = 928

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
 Frame = +3

Query: 162 MKGLLRKMIPIPQTHSIPDEEEEHVAVGEYSFATEYVGPPVNYELLPKAVPIDMKKIPTA 341
           M  LLRK++P+  + S P E++E      YSFA  Y GP + +E+ P+AVP+D+ +IP A
Sbjct: 1   MSSLLRKILPVVPS-STPKEDDESNYESSYSFAALYSGPLITHEI-PRAVPVDVTQIPIA 58

Query: 342 T-ISSSGNTN--LLTVVQPIEKRQIIDLPSPK 428
           + I+SS   N   L V+QPI K +      PK
Sbjct: 59  SKIASSSKVNDVPLPVIQPILKSKSSGKKPPK 90


>ref|XP_002313077.1| predicted protein [Populus trichocarpa] gi|222849485|gb|EEE87032.1|
           predicted protein [Populus trichocarpa]
          Length = 855

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
 Frame = +3

Query: 162 MKGLLRKMIPIPQTHSIPDEEEEHVAVGEYSFATEYVGPPVNYELLPKAVPIDMKKIPTA 341
           M G LRK++P      +  E+E+     E+SFA  Y GP V Y+ +P+AVP+D+K+IP A
Sbjct: 1   MAGALRKILPFRSAIQVEKEDEDKHNSFEFSFAVVYSGPLVTYD-VPRAVPVDLKQIPVA 59

Query: 342 T-ISSSGNTN---LLTVVQPIEK--RQIIDLPS 422
           + +  SG+      L VVQPI K  R++ + P+
Sbjct: 60  SPVIGSGSLTSDVSLPVVQPIVKSNRKLSEKPN 92


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