BLASTX nr result

ID: Coptis23_contig00016492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016492
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38674.3| unnamed protein product [Vitis vinifera]              348   7e-94
ref|XP_002263812.1| PREDICTED: C-type lectin receptor-like tyros...   348   7e-94
ref|XP_002326442.1| predicted protein [Populus trichocarpa] gi|2...   348   9e-94
ref|XP_002519359.1| kinase, putative [Ricinus communis] gi|22354...   346   4e-93
ref|XP_004161974.1| PREDICTED: C-type lectin receptor-like tyros...   342   6e-92

>emb|CBI38674.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  348 bits (894), Expect = 7e-94
 Identities = 169/216 (78%), Positives = 181/216 (83%)
 Frame = +2

Query: 191 HRKKEYXXXXXXXXXXXXCTTLAVVIWLLAXXXXXXXXXXXXVSNPSTSLLVPPSWKIFT 370
           H  KEY             TTLAVVIWLLA            +SNP+ S LVPPSWK+FT
Sbjct: 199 HCHKEYLIILAVVSGLILSTTLAVVIWLLAYRRSKRRRRSRKLSNPAASALVPPSWKVFT 258

Query: 371 KEELRAITKNFSEGNRLVGDAKTGGTYSGLLLDGSRVAIKRLKRSNFQRKKEFYSEIGRV 550
            EELR+ITKNFSEGNRL+GDAKTGGTYSGLL DGSRVA+KRLKRS FQRKKEFYSEIGRV
Sbjct: 259 NEELRSITKNFSEGNRLLGDAKTGGTYSGLLPDGSRVAVKRLKRSTFQRKKEFYSEIGRV 318

Query: 551 ARLHHPNLVALKGCCYDHGDRYIVYEFFANGPLDRWLHHIPRGARSLNWSMRIQVATTLA 730
           ARLHHPNLVA+KGCCYDHGDRYIVYEF  NGPLDRWLHHIPRG RSL+W+MR+++ATTLA
Sbjct: 319 ARLHHPNLVAVKGCCYDHGDRYIVYEFIINGPLDRWLHHIPRGGRSLDWAMRMKIATTLA 378

Query: 731 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 838
           QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG
Sbjct: 379 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 414


>ref|XP_002263812.1| PREDICTED: C-type lectin receptor-like tyrosine-protein kinase
           At1g52310-like [Vitis vinifera]
          Length = 542

 Score =  348 bits (894), Expect = 7e-94
 Identities = 169/216 (78%), Positives = 181/216 (83%)
 Frame = +2

Query: 191 HRKKEYXXXXXXXXXXXXCTTLAVVIWLLAXXXXXXXXXXXXVSNPSTSLLVPPSWKIFT 370
           H  KEY             TTLAVVIWLLA            +SNP+ S LVPPSWK+FT
Sbjct: 185 HCHKEYLIILAVVSGLILSTTLAVVIWLLAYRRSKRRRRSRKLSNPAASALVPPSWKVFT 244

Query: 371 KEELRAITKNFSEGNRLVGDAKTGGTYSGLLLDGSRVAIKRLKRSNFQRKKEFYSEIGRV 550
            EELR+ITKNFSEGNRL+GDAKTGGTYSGLL DGSRVA+KRLKRS FQRKKEFYSEIGRV
Sbjct: 245 NEELRSITKNFSEGNRLLGDAKTGGTYSGLLPDGSRVAVKRLKRSTFQRKKEFYSEIGRV 304

Query: 551 ARLHHPNLVALKGCCYDHGDRYIVYEFFANGPLDRWLHHIPRGARSLNWSMRIQVATTLA 730
           ARLHHPNLVA+KGCCYDHGDRYIVYEF  NGPLDRWLHHIPRG RSL+W+MR+++ATTLA
Sbjct: 305 ARLHHPNLVAVKGCCYDHGDRYIVYEFIINGPLDRWLHHIPRGGRSLDWAMRMKIATTLA 364

Query: 731 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 838
           QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG
Sbjct: 365 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 400


>ref|XP_002326442.1| predicted protein [Populus trichocarpa] gi|222833764|gb|EEE72241.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  348 bits (893), Expect = 9e-94
 Identities = 166/216 (76%), Positives = 182/216 (84%)
 Frame = +2

Query: 191 HRKKEYXXXXXXXXXXXXCTTLAVVIWLLAXXXXXXXXXXXXVSNPSTSLLVPPSWKIFT 370
           H  +EY            CTTLAVVIWLLA            +SNP+ S LVPPSWK+FT
Sbjct: 163 HCHREYLIILAVVSGLILCTTLAVVIWLLAYRRSKKRRKSRKLSNPAASALVPPSWKVFT 222

Query: 371 KEELRAITKNFSEGNRLVGDAKTGGTYSGLLLDGSRVAIKRLKRSNFQRKKEFYSEIGRV 550
            EELR+ITKNFSEGNRL+GDAKTGGTYSG L DGSRVA+KRLKRS+FQRKKEFYSEIGRV
Sbjct: 223 NEELRSITKNFSEGNRLLGDAKTGGTYSGFLPDGSRVAVKRLKRSSFQRKKEFYSEIGRV 282

Query: 551 ARLHHPNLVALKGCCYDHGDRYIVYEFFANGPLDRWLHHIPRGARSLNWSMRIQVATTLA 730
           ARLHHPNLVA+KGCCYDHGDRYIVYEF  NGPLDRWLHH+PRG RSL+W+MR+++ATTLA
Sbjct: 283 ARLHHPNLVAIKGCCYDHGDRYIVYEFILNGPLDRWLHHVPRGGRSLDWAMRMKIATTLA 342

Query: 731 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 838
           QGIAFLHDKVKPHVVHRDIRAS+VLLDEEFGAHLMG
Sbjct: 343 QGIAFLHDKVKPHVVHRDIRASSVLLDEEFGAHLMG 378


>ref|XP_002519359.1| kinase, putative [Ricinus communis] gi|223541426|gb|EEF42976.1|
           kinase, putative [Ricinus communis]
          Length = 552

 Score =  346 bits (887), Expect = 4e-93
 Identities = 167/216 (77%), Positives = 180/216 (83%)
 Frame = +2

Query: 191 HRKKEYXXXXXXXXXXXXCTTLAVVIWLLAXXXXXXXXXXXXVSNPSTSLLVPPSWKIFT 370
           H  +EY            CT LAVVIWLLA            +SNP+ S LVPPSWK+FT
Sbjct: 195 HCHREYLIILAVVSGLILCTALAVVIWLLAYRRSRKRRKSRKLSNPAASALVPPSWKVFT 254

Query: 371 KEELRAITKNFSEGNRLVGDAKTGGTYSGLLLDGSRVAIKRLKRSNFQRKKEFYSEIGRV 550
            EELR+ITKNFSEGNRL GDAKTGGTYSGLL DGSRVA+KRLKRS+FQRKKEFYSEIGRV
Sbjct: 255 NEELRSITKNFSEGNRLPGDAKTGGTYSGLLPDGSRVAVKRLKRSSFQRKKEFYSEIGRV 314

Query: 551 ARLHHPNLVALKGCCYDHGDRYIVYEFFANGPLDRWLHHIPRGARSLNWSMRIQVATTLA 730
           ARLHHPNLVA+KGCCYDHGDRYIVYEF  NGPLDRWLHHI RG RSL+W+MR+++ATTLA
Sbjct: 315 ARLHHPNLVAIKGCCYDHGDRYIVYEFVVNGPLDRWLHHISRGGRSLDWTMRMKIATTLA 374

Query: 731 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 838
           QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG
Sbjct: 375 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 410


>ref|XP_004161974.1| PREDICTED: C-type lectin receptor-like tyrosine-protein kinase
           At1g52310-like [Cucumis sativus]
          Length = 557

 Score =  342 bits (877), Expect = 6e-92
 Identities = 165/216 (76%), Positives = 180/216 (83%)
 Frame = +2

Query: 191 HRKKEYXXXXXXXXXXXXCTTLAVVIWLLAXXXXXXXXXXXXVSNPSTSLLVPPSWKIFT 370
           H  KEY            CTTLAVVIWLLA             SNP+ S LVPP W++FT
Sbjct: 198 HCHKEYLVILAVVSGLIFCTTLAVVIWLLAHKRSKKRRRSRKPSNPAASALVPPLWRVFT 257

Query: 371 KEELRAITKNFSEGNRLVGDAKTGGTYSGLLLDGSRVAIKRLKRSNFQRKKEFYSEIGRV 550
           KEELR++TKNFSEGNRL+GDAKTGGTYSGLL DGSRVAIKRLK+S+FQRKKEF+SEI RV
Sbjct: 258 KEELRSMTKNFSEGNRLLGDAKTGGTYSGLLPDGSRVAIKRLKKSSFQRKKEFHSEIARV 317

Query: 551 ARLHHPNLVALKGCCYDHGDRYIVYEFFANGPLDRWLHHIPRGARSLNWSMRIQVATTLA 730
           ARL HPNLVALKGCCYDHGDRYIVYEF  NGPLDRWLHH+PRG RSL+W+MR+++ATTLA
Sbjct: 318 ARLRHPNLVALKGCCYDHGDRYIVYEFIVNGPLDRWLHHVPRGGRSLDWTMRMKIATTLA 377

Query: 731 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 838
           QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG
Sbjct: 378 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 413


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