BLASTX nr result

ID: Coptis23_contig00016490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016490
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI41205.1| oxygenase protein, partial [Arabidopsis thaliana]      397   e-108
ref|XP_004141886.1| PREDICTED: prolyl 4-hydroxylase subunit alph...   397   e-108
ref|NP_567941.1| oxidoreductase, 2OG-Fe(II) oxygenase family pro...   397   e-108
dbj|BAD07294.1| prolyl 4-hydroxylase [Nicotiana tabacum]              396   e-108
ref|XP_002867145.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   395   e-108

>gb|AFI41205.1| oxygenase protein, partial [Arabidopsis thaliana]
          Length = 288

 Score =  397 bits (1020), Expect = e-108
 Identities = 199/285 (69%), Positives = 229/285 (80%), Gaps = 6/285 (2%)
 Frame = +1

Query: 133 MKS--KSYRSSFRGKLSLPIVFILCLAFFLAGFYGSMFLPYHQ---SPRTRLLESLAD-D 294
           MKS  KSYR   R KL L  V + C   FL GFYGS  L  +     PR R+LE + + +
Sbjct: 1   MKSRLKSYR---RKKLGLATVIVFCSLCFLFGFYGSTLLSQNVPRVKPRLRMLEMVENGE 57

Query: 295 IELESVPHGKKGDPFTSSIPFQVLSWKPRAVLYPGFASPEQCEIIIKRAKANLKPSTLAL 474
            E  S+PHG  G+    SIPFQVLSW+PRA+ +P FA+ EQC+ II+RAK NLKPS LAL
Sbjct: 58  EEAGSMPHGVTGEESIGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALAL 117

Query: 475 RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKIARATMIPQSHGEAFNILRYEIGQ 654
           RKGETAENT+G RTSSGTF+SASE+ TG LD +E+KIARATMIP+SHGE+FNILRYE+GQ
Sbjct: 118 RKGETAENTKGTRTSSGTFISASEESTGALDFVERKIARATMIPRSHGESFNILRYELGQ 177

Query: 655 RYLAHYDAFNPAEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 834
           +Y +HYD FNP EYGPQ SQRIASFLLYLSDVEEGGET FP+ENGSNM I YD+++CIGL
Sbjct: 178 KYDSHYDVFNPTEYGPQSSQRIASFLLYLSDVEEGGETMFPFENGSNMGIGYDYKQCIGL 237

Query: 835 KVKPRQGDGLLFYSLFPNGTIDQTSLHGSCPVITGEKWVATKWIR 969
           KVKPR+GDGLLFYS+FPNGTIDQTSLHGSCPV  GEKWVATKWIR
Sbjct: 238 KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVATKWIR 282


>ref|XP_004141886.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Cucumis
           sativus]
          Length = 294

 Score =  397 bits (1019), Expect = e-108
 Identities = 197/285 (69%), Positives = 232/285 (81%), Gaps = 6/285 (2%)
 Frame = +1

Query: 133 MKSKSYRS--SFRGKLSLP-IVFILCLAFFLAGFYGSMFLPYH---QSPRTRLLESLADD 294
           MK KS RS  S R KL LP ++F+LCL  FLAGF+GS  L        PR RLL+S +D 
Sbjct: 1   MKGKSGRSNWSLRSKLGLPALIFVLCLFCFLAGFFGSTLLSQDVDDDRPRARLLQSASDV 60

Query: 295 IELESVPHGKKGDPFTSSIPFQVLSWKPRAVLYPGFASPEQCEIIIKRAKANLKPSTLAL 474
            E + +  G+ GD   SSIPFQVLSW+PRA+ +P FA+ EQC+ I+  AK  L+PSTLAL
Sbjct: 61  TEFDLMSSGENGDDSISSIPFQVLSWRPRALYFPKFATAEQCQSIVNLAKPKLRPSTLAL 120

Query: 475 RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKIARATMIPQSHGEAFNILRYEIGQ 654
           RKGETAE+T+G+RTSSG F SASED++G L +IE+KIARATMIP++HGEA+NILRYEIGQ
Sbjct: 121 RKGETAESTKGVRTSSGVFFSASEDESGTLGVIEEKIARATMIPRTHGEAYNILRYEIGQ 180

Query: 655 RYLAHYDAFNPAEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 834
           +Y +HYDAF P+EYGPQKSQR+ASFLLYL+DVEEGGET FP+ENG NMD  Y+FQ CIGL
Sbjct: 181 KYNSHYDAFKPSEYGPQKSQRVASFLLYLTDVEEGGETMFPFENGLNMDGTYNFQTCIGL 240

Query: 835 KVKPRQGDGLLFYSLFPNGTIDQTSLHGSCPVITGEKWVATKWIR 969
           KVKPRQGDGLLFYS+FPNGTID TSLHGSCPVI G+KWVATKWIR
Sbjct: 241 KVKPRQGDGLLFYSVFPNGTIDPTSLHGSCPVIKGQKWVATKWIR 285


>ref|NP_567941.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
           thaliana] gi|17381226|gb|AAL36425.1| unknown protein
           [Arabidopsis thaliana] gi|20465827|gb|AAM20018.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592377|gb|AAM64328.1| putative dioxygenase
           [Arabidopsis thaliana] gi|332660892|gb|AEE86292.1|
           oxidoreductase, 2OG-Fe(II) oxygenase family protein
           [Arabidopsis thaliana]
          Length = 288

 Score =  397 bits (1019), Expect = e-108
 Identities = 198/285 (69%), Positives = 229/285 (80%), Gaps = 6/285 (2%)
 Frame = +1

Query: 133 MKS--KSYRSSFRGKLSLPIVFILCLAFFLAGFYGSMFLPYHQ---SPRTRLLESLAD-D 294
           MKS  KSYR   R KL L  V + C   FL GFYGS  L  +     PR R+L+ + + +
Sbjct: 1   MKSRLKSYR---RKKLGLATVIVFCSLCFLFGFYGSTLLSQNVPRVKPRLRMLDMVENGE 57

Query: 295 IELESVPHGKKGDPFTSSIPFQVLSWKPRAVLYPGFASPEQCEIIIKRAKANLKPSTLAL 474
            E  S+PHG  G+    SIPFQVLSW+PRA+ +P FA+ EQC+ II+RAK NLKPS LAL
Sbjct: 58  EEASSMPHGVTGEESIGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALAL 117

Query: 475 RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKIARATMIPQSHGEAFNILRYEIGQ 654
           RKGETAENT+G RTSSGTF+SASE+ TG LD +E+KIARATMIP+SHGE+FNILRYE+GQ
Sbjct: 118 RKGETAENTKGTRTSSGTFISASEESTGALDFVERKIARATMIPRSHGESFNILRYELGQ 177

Query: 655 RYLAHYDAFNPAEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 834
           +Y +HYD FNP EYGPQ SQRIASFLLYLSDVEEGGET FP+ENGSNM I YD+++CIGL
Sbjct: 178 KYDSHYDVFNPTEYGPQSSQRIASFLLYLSDVEEGGETMFPFENGSNMGIGYDYKQCIGL 237

Query: 835 KVKPRQGDGLLFYSLFPNGTIDQTSLHGSCPVITGEKWVATKWIR 969
           KVKPR+GDGLLFYS+FPNGTIDQTSLHGSCPV  GEKWVATKWIR
Sbjct: 238 KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVATKWIR 282


>dbj|BAD07294.1| prolyl 4-hydroxylase [Nicotiana tabacum]
          Length = 286

 Score =  396 bits (1017), Expect = e-108
 Identities = 194/268 (72%), Positives = 224/268 (83%), Gaps = 4/268 (1%)
 Frame = +1

Query: 178 LPIVFILCLAFFLAGFYGSMFLPYHQ----SPRTRLLESLADDIELESVPHGKKGDPFTS 345
           LP VF+LCL FFL GF+GS    +       PR R LES+  + + + +P G+ G+    
Sbjct: 14  LPSVFLLCLFFFLLGFFGSALFSHQDVPSVRPRPRFLESVYQE-DFDPLPIGETGEHSLI 72

Query: 346 SIPFQVLSWKPRAVLYPGFASPEQCEIIIKRAKANLKPSTLALRKGETAENTQGIRTSSG 525
           SIPFQVLSW PRA+ +P FAS EQC+ IIK AKAN++PS+LALR GET E T+GIRTSSG
Sbjct: 73  SIPFQVLSWFPRALYFPNFASIEQCQSIIKMAKANMEPSSLALRTGETEETTKGIRTSSG 132

Query: 526 TFLSASEDKTGVLDLIEQKIARATMIPQSHGEAFNILRYEIGQRYLAHYDAFNPAEYGPQ 705
           TF+SASEDKTG+LDLIE+KIA+ATMIP++HGEAFN+LRYEIGQRY +HYDAF+PA+YGPQ
Sbjct: 133 TFISASEDKTGILDLIEEKIAKATMIPKTHGEAFNVLRYEIGQRYQSHYDAFDPAQYGPQ 192

Query: 706 KSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGLKVKPRQGDGLLFYSLFP 885
           KSQR ASFLLYLSDVEEGGET FPYENG NMD +YDF +CIGLKVKPR+GDGLLFYSLFP
Sbjct: 193 KSQRAASFLLYLSDVEEGGETVFPYENGQNMDASYDFSKCIGLKVKPRRGDGLLFYSLFP 252

Query: 886 NGTIDQTSLHGSCPVITGEKWVATKWIR 969
           NGTID TSLHGSCPVI GEKWVATKWIR
Sbjct: 253 NGTIDLTSLHGSCPVIRGEKWVATKWIR 280


>ref|XP_002867145.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297312981|gb|EFH43404.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 288

 Score =  395 bits (1016), Expect = e-108
 Identities = 198/285 (69%), Positives = 227/285 (79%), Gaps = 6/285 (2%)
 Frame = +1

Query: 133 MKS--KSYRSSFRGKLSLPIVFILCLAFFLAGFYGSMFLPYHQ---SPRTRLLESLADDI 297
           MKS  KSY+   R KL L  V + C   FL GFYGS  L  +     PR R+LE + +  
Sbjct: 1   MKSRLKSYK---RKKLGLATVIVFCSLCFLVGFYGSTLLSQNVPRVKPRLRMLEMVENGE 57

Query: 298 E-LESVPHGKKGDPFTSSIPFQVLSWKPRAVLYPGFASPEQCEIIIKRAKANLKPSTLAL 474
           E   S+PHG  G+    SIPFQVLSW+PRA+ +P FA+ EQC+ II+RAK NLKPS LAL
Sbjct: 58  EDTGSMPHGVTGEESVGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALAL 117

Query: 475 RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKIARATMIPQSHGEAFNILRYEIGQ 654
           RKGETAENT+G RTSSGTF+SASED TG LD +E+KIARATMIP+SHGE+FNILRYE+GQ
Sbjct: 118 RKGETAENTKGTRTSSGTFISASEDSTGALDFVERKIARATMIPRSHGESFNILRYELGQ 177

Query: 655 RYLAHYDAFNPAEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 834
           +Y +HYD FNP EYGPQ SQRIASFLLYLSDVEEGGET FP+ENGSNM   YD+++CIGL
Sbjct: 178 KYDSHYDVFNPTEYGPQSSQRIASFLLYLSDVEEGGETMFPFENGSNMGTGYDYKQCIGL 237

Query: 835 KVKPRQGDGLLFYSLFPNGTIDQTSLHGSCPVITGEKWVATKWIR 969
           KVKPR+GDGLLFYS+FPNGTIDQTSLHGSCPV  GEKWVATKWIR
Sbjct: 238 KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVATKWIR 282


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