BLASTX nr result

ID: Coptis23_contig00016435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016435
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154457.1| uncharacterized protein [Arabidopsis thalian...    89   5e-16
ref|NP_176998.1| uncharacterized protein [Arabidopsis thaliana] ...    89   5e-16
ref|XP_002887175.1| hypothetical protein ARALYDRAFT_475950 [Arab...    89   5e-16
ref|XP_002276610.1| PREDICTED: MIP18 family protein At1g68310-li...    88   6e-16
emb|CBI30451.3| unnamed protein product [Vitis vinifera]               88   6e-16

>ref|NP_001154457.1| uncharacterized protein [Arabidopsis thaliana]
           gi|259016173|sp|Q9C9G6.2|U195A_ARATH RecName: Full=MIP18
           family protein At1g68310 gi|28973748|gb|AAO64190.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824195|gb|AAP04058.1| unknown protein [Arabidopsis
           thaliana] gi|110736710|dbj|BAF00318.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|227206312|dbj|BAH57211.1| AT1G68310 [Arabidopsis
           thaliana] gi|332196659|gb|AEE34780.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 157

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/47 (85%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   EDAVEVNDKNSHVRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFK 143
           ED+VEV+D+NS+VRVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+K
Sbjct: 64  EDSVEVDDENSYVRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYK 110



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +1

Query: 139 LRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFKV 246
           +RVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+K+
Sbjct: 76  VRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYKI 111


>ref|NP_176998.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12325332|gb|AAG52613.1|AC016447_22 unknown protein;
           44053-42626 [Arabidopsis thaliana]
           gi|332196658|gb|AEE34779.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 159

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/47 (85%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   EDAVEVNDKNSHVRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFK 143
           ED+VEV+D+NS+VRVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+K
Sbjct: 66  EDSVEVDDENSYVRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYK 112



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +1

Query: 139 LRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFKV 246
           +RVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+K+
Sbjct: 78  VRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYKI 113


>ref|XP_002887175.1| hypothetical protein ARALYDRAFT_475950 [Arabidopsis lyrata subsp.
           lyrata] gi|297333016|gb|EFH63434.1| hypothetical protein
           ARALYDRAFT_475950 [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/47 (85%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   EDAVEVNDKNSHVRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFK 143
           ED+VEV+D+NS+VRVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+K
Sbjct: 73  EDSVEVDDENSYVRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYK 119



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +1

Query: 139 LRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFKV 246
           +RVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+K+
Sbjct: 85  VRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYKI 120


>ref|XP_002276610.1| PREDICTED: MIP18 family protein At1g68310-like [Vitis vinifera]
          Length = 158

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/47 (85%), Positives = 46/47 (97%)
 Frame = +3

Query: 3   EDAVEVNDKNSHVRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFK 143
           EDA+EV+DK S+VRVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+K
Sbjct: 64  EDAIEVDDKRSYVRVTFTPTVEHCSMATVIGLCLRVKLLRSLPSRYK 110



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +1

Query: 139 LRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFKV 246
           +RVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+KV
Sbjct: 76  VRVTFTPTVEHCSMATVIGLCLRVKLLRSLPSRYKV 111


>emb|CBI30451.3| unnamed protein product [Vitis vinifera]
          Length = 120

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/47 (85%), Positives = 46/47 (97%)
 Frame = +3

Query: 3   EDAVEVNDKNSHVRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFK 143
           EDA+EV+DK S+VRVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+K
Sbjct: 26  EDAIEVDDKRSYVRVTFTPTVEHCSMATVIGLCLRVKLLRSLPSRYK 72



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +1

Query: 139 LRVTFTPTVEHCSMATIIGLCIRVKLLRSLPSRFKV 246
           +RVTFTPTVEHCSMAT+IGLC+RVKLLRSLPSR+KV
Sbjct: 38  VRVTFTPTVEHCSMATVIGLCLRVKLLRSLPSRYKV 73


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