BLASTX nr result

ID: Coptis23_contig00016424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016424
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282306.1| PREDICTED: uncharacterized protein LOC100267...    99   2e-18
ref|XP_002326178.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-14
ref|XP_002519544.1| conserved hypothetical protein [Ricinus comm...    79   2e-12
ref|XP_004137970.1| PREDICTED: uncharacterized protein LOC101213...    78   5e-12
gb|ACA35277.1| hypothetical protein [Cucumis sativus]                  78   5e-12

>ref|XP_002282306.1| PREDICTED: uncharacterized protein LOC100267366 [Vitis vinifera]
          Length = 547

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 29/249 (11%)
 Frame = -1

Query: 1052 NRMEIKL-LKLQLIYQTHSSKTLLLKIFIFATLMALIPCFDLIYVLNGC-----NIINSP 891
            +RM IK  LK Q++Y +  ++ L L+  +FA+++A++P   ++           N  + P
Sbjct: 80   SRMGIKAALKWQILYGS-LARRLFLRACLFASVLAIVPLVQIVREARAVEPFAVNFEDCP 138

Query: 890  ITFQTINLHMNVTEL--------------------NSS---FHTLLSTNYLNPNLKKTLI 780
            +   +  L   V  L                    NS+   F  L+  + L+ N  KTL 
Sbjct: 139  LDVSSNPLFFRVDYLRPLSALVFPLFGALPCKGPENSTIRVFRELMEMDLLD-NEAKTLC 197

Query: 779  IGSESARAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKEDSFDFVFSTAMIDGVK 600
            +G  S  A+  +R+LGF + +GV+  P  SL+++  IY L  KE+SFDFVFS A +D V 
Sbjct: 198  VGVGSGSAISALRELGFSNALGVDRHPFFSLLRKRFIYELDFKENSFDFVFSRA-LDKVS 256

Query: 599  VPARMVLEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSSYLKFSDVVDVRTVNST 420
            VPA ++LE+E                     +  ++++A PVSS+LK S+VV V  +NS 
Sbjct: 257  VPALLMLEIERVLRPGGIGAILVGAHDYN--SGSLIRSATPVSSFLKSSNVVHVSGINSF 314

Query: 419  VMVIFKKRF 393
             +V+F+KRF
Sbjct: 315  TLVVFEKRF 323


>ref|XP_002326178.1| predicted protein [Populus trichocarpa] gi|222833371|gb|EEE71848.1|
            predicted protein [Populus trichocarpa]
          Length = 459

 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 74/242 (30%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
 Frame = -1

Query: 1046 MEIKLLKLQLIYQTHSSKTLLLKIFIFATLMALIPCFDLIYVLNGCNIINS--------P 891
            M +K L+ Q++  +  ++ +LL+ F+ AT +++IP   ++   +   +++S        P
Sbjct: 1    MNLKALRCQILSGS-IARRVLLRAFMLATAISIIPSLQILSGSDPGLLLDSVRYNECDFP 59

Query: 890  ITFQTINL-----------------HMNVTELNSSFHTLLSTNYLNPNLKKTLIIGSESA 762
            + F   NL                  MNVT   +    L+    ++ + K  L +G  SA
Sbjct: 60   LMFMGSNLLKNRFLKPFWGSIDCKDDMNVT--TNVARELMGMQMIDSSAK-ALCVGEGSA 116

Query: 761  RAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKEDSFDFVFSTAMIDGVKVPARMV 582
             AV  +R LGF +  GV+  P  SL  +  +Y L   E+SFDFVFS   +D V VPA +V
Sbjct: 117  PAVYALRDLGFVNAFGVHKLPFFSLKHKRVVYELEYAENSFDFVFS-GDLDKVSVPAIVV 175

Query: 581  LEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSSYLKFSDVVDVRTVNSTVMVIFK 402
            LE+E                     A  ++++A PVSS LK S++V V  VN   +V+FK
Sbjct: 176  LEIERVLKPGGIGAILVGLNSLN--ANSLIRSAMPVSSLLKNSNIVHVGYVNEYTLVVFK 233

Query: 401  KR 396
            KR
Sbjct: 234  KR 235


>ref|XP_002519544.1| conserved hypothetical protein [Ricinus communis]
            gi|223541407|gb|EEF42958.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 460

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 70/242 (28%), Positives = 109/242 (45%), Gaps = 25/242 (10%)
 Frame = -1

Query: 1046 MEIKLLKLQLIYQTHSSKTLLLKIFIFATLMALIPCFDLIY----------VLNGCNIIN 897
            M++K   LQ++  +  ++ LL++ F+ A+ +++ P   LI             + C++  
Sbjct: 1    MDLKASTLQILGGS-IARRLLVRAFMLASALSIFPLVQLIIGSDPILLDSVKFHECDV-- 57

Query: 896  SPITFQTINLHMN---------------VTELNSSFHTLLSTNYLNPNLKKTLIIGSESA 762
             P T ++ NL  N               V         L+S   L     K L +G  SA
Sbjct: 58   -PFTIKSKNLFQNRFLKPIWNSFECKEYVNLTTDVVRELMSKQLLLDYSAKALCVGEGSA 116

Query: 761  RAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKEDSFDFVFSTAMIDGVKVPARMV 582
             AV  +R+LGF +  G +  P  SL  R  +Y L   ++ FDFVFS   +D V VPA +V
Sbjct: 117  SAVYALRELGFVNACGAHRHPFFSLKHRKFVYELQYADNFFDFVFSRD-LDEVSVPAILV 175

Query: 581  LEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSSYLKFSDVVDVRTVNSTVMVIFK 402
            LE+E                        ++++A PVSS LK S+VV V  V    +V+F+
Sbjct: 176  LEIERVLKPGGIGAMLVGVNGLN--PNGLIRSATPVSSLLKASNVVHVGYVQKYTLVVFQ 233

Query: 401  KR 396
            KR
Sbjct: 234  KR 235


>ref|XP_004137970.1| PREDICTED: uncharacterized protein LOC101213900 [Cucumis sativus]
           gi|449513672|ref|XP_004164390.1| PREDICTED:
           uncharacterized protein LOC101231697 [Cucumis sativus]
          Length = 480

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 52/145 (35%), Positives = 75/145 (51%)
 Frame = -1

Query: 827 LLSTNYLNPNLKKTLIIGSESARAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKE 648
           L+    LN +  K+L +G  S  AV+ +R +GF D +GV      SL ++  +Y L  K 
Sbjct: 104 LMEKKLLN-HTAKSLCVGEGSGSAVLALRDIGFSDVIGVGQHRFFSLRRKQFVYELDFKS 162

Query: 647 DSFDFVFSTAMIDGVKVPARMVLEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSS 468
             FDFVFS   +D   VPA +VLE+E                       ++++AA PVSS
Sbjct: 163 GYFDFVFSRD-LDRYSVPALLVLEIERVLRPGGIGAVIVSTSESM--PNNLIRAATPVSS 219

Query: 467 YLKFSDVVDVRTVNSTVMVIFKKRF 393
            LK S V+ V  VN+  +V+FKK+F
Sbjct: 220 LLKTSTVMHVGHVNNLTLVVFKKKF 244


>gb|ACA35277.1| hypothetical protein [Cucumis sativus]
          Length = 441

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 52/145 (35%), Positives = 75/145 (51%)
 Frame = -1

Query: 827 LLSTNYLNPNLKKTLIIGSESARAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKE 648
           L+    LN +  K+L +G  S  AV+ +R +GF D +GV      SL ++  +Y L  K 
Sbjct: 65  LMEKKLLN-HTAKSLCVGEGSGSAVLALRDIGFSDVIGVGQHRFFSLRRKQFVYELDFKS 123

Query: 647 DSFDFVFSTAMIDGVKVPARMVLEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSS 468
             FDFVFS   +D   VPA +VLE+E                       ++++AA PVSS
Sbjct: 124 GYFDFVFSRD-LDRYSVPALLVLEIERVLRPGGIGAVIVSTSESM--PNNLIRAATPVSS 180

Query: 467 YLKFSDVVDVRTVNSTVMVIFKKRF 393
            LK S V+ V  VN+  +V+FKK+F
Sbjct: 181 LLKTSTVMHVGHVNNLTLVVFKKKF 205


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