BLASTX nr result
ID: Coptis23_contig00016418
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00016418
(1405 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001148458.1| AT-hook protein 1 [Zea mays] gi|194704752|gb... 116 2e-23
gb|AAK00433.1|AC060755_3 putative AT-Hook DNA-binding protein [O... 114 5e-23
gb|ABG66282.1| AT-hook protein 1, putative, expressed [Oryza sat... 114 5e-23
gb|EAZ17056.1| hypothetical protein OsJ_32550 [Oryza sativa Japo... 114 5e-23
ref|NP_001065467.1| Os10g0572900 [Oryza sativa Japonica Group] g... 114 5e-23
>ref|NP_001148458.1| AT-hook protein 1 [Zea mays] gi|194704752|gb|ACF86460.1| unknown
[Zea mays] gi|195619414|gb|ACG31537.1| AT-hook protein 1
[Zea mays] gi|224030103|gb|ACN34127.1| unknown [Zea
mays] gi|224030137|gb|ACN34144.1| unknown [Zea mays]
gi|224033127|gb|ACN35639.1| unknown [Zea mays]
gi|414867873|tpg|DAA46430.1| TPA: AT-hook protein 1
isoform 1 [Zea mays] gi|414867874|tpg|DAA46431.1| TPA:
AT-hook protein 1 isoform 2 [Zea mays]
gi|414867875|tpg|DAA46432.1| TPA: AT-hook protein 1
isoform 3 [Zea mays]
Length = 417
Score = 116 bits (290), Expect = 2e-23
Identities = 67/128 (52%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Frame = -3
Query: 710 YEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSLAGSDGRILGGGVAGMLIAATPVQVVIG 531
YEGRFEIISLSGSFLL E +LAGSDGR+LGG VAGML+AATPVQVV+
Sbjct: 250 YEGRFEIISLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVLGGCVAGMLMAATPVQVVVA 309
Query: 530 SFGAE--ENPMSELSLREPLLAPAPYMMSFGMPVAAVPPPFPSTYSGSSDETGSPINFSS 357
SF AE ++ +E EP+ AP P M +F P A PP T S SSD++GSPI+ S+
Sbjct: 310 SFIAEGKKSKPAEARKVEPMAAPPPQMATFVPPPLATSPPSEGTSSASSDDSGSPIHHSA 369
Query: 356 RACNDTEQ 333
+++ Q
Sbjct: 370 MPFSNSSQ 377
Score = 96.7 bits (239), Expect = 1e-17
Identities = 58/126 (46%), Positives = 78/126 (61%), Gaps = 16/126 (12%)
Frame = -1
Query: 1165 GLNMVS-SEPVKRKRGRPRKYHGPDGGVVLALSPLSPSEAPNS------KNGPNASSYKP 1007
G N++ E +++KRGRPRKY PDG + LAL+P+S + A + ++G S P
Sbjct: 107 GANVLGMGELMRKKRGRPRKY-APDGSMALALAPISSASAGGAAAPGQQQHGGGFSISSP 165
Query: 1006 ------RNRKRPT---KKQQLDPFGSAGRGFMANVIVVKAGEDIASKIMAFSQQGPHTVC 854
+ R RP KK+Q + GS G F +++ VKAGED+ASKIM FSQQGP TVC
Sbjct: 166 PSDPNAKRRGRPPGSGKKKQFEALGSWGIAFTPHILTVKAGEDVASKIMTFSQQGPRTVC 225
Query: 853 VLSANG 836
+LSANG
Sbjct: 226 ILSANG 231
>gb|AAK00433.1|AC060755_3 putative AT-Hook DNA-binding protein [Oryza sativa Japonica Group]
gi|110289621|gb|ABB48013.2| AT-hook protein 1, putative,
expressed [Oryza sativa Japonica Group]
gi|110289622|gb|ABB48012.2| AT-hook protein 1, putative,
expressed [Oryza sativa Japonica Group]
gi|125533038|gb|EAY79603.1| hypothetical protein
OsI_34743 [Oryza sativa Indica Group]
Length = 405
Score = 114 bits (286), Expect = 5e-23
Identities = 73/158 (46%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Frame = -3
Query: 710 YEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSLAGSDGRILGGGVAGMLIAATPVQVVIG 531
YEGRFEIISLSGSFLL E +LAGSDGR+LGG VAGML+AATPVQVV+
Sbjct: 242 YEGRFEIISLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVLGGCVAGMLMAATPVQVVVA 301
Query: 530 SFGAEENPMSELSLREPLLAPAPYMMSFGMPVAAVPPPFPSTYSGSSDETGSPINFSSRA 351
SF AE + R+ AP M+ +P PP T SGSSD++GSPIN S
Sbjct: 302 SFIAEGKKSKPVETRKVEPMSAPPQMATYVPAPVASPPSEGTSSGSSDDSGSPINHSGMP 361
Query: 350 CNDTEQSNQATY------TYSSIG------HANTHSSN 273
N + Q Q Y+S G H N H S+
Sbjct: 362 YNHSGQQQQHQQHQHMPPAYASGGWSLSAHHQNRHDSD 399
Score = 99.4 bits (246), Expect = 2e-18
Identities = 62/130 (47%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Frame = -1
Query: 1174 PDCGLNMVSSEPVKRKRGRPRKYHGPDGGVVLALSPLS------------PSEAPN--SK 1037
P G M E +++KRGRPRKY PDG + LAL+P+S P P+ S
Sbjct: 96 PQGGNVMGMGELMRKKRGRPRKY-APDGSMALALAPISSASGGAAPPPPPPGHQPHGFSI 154
Query: 1036 NGPNASSYKPRNRKRPT---KKQQLDPFGSAGRGFMANVIVVKAGEDIASKIMAFSQQGP 866
+ P AS + R RP KK+Q + GS G F +++ VKAGED+ASKIMAFSQQGP
Sbjct: 155 SSP-ASDPNAKRRGRPPGSGKKKQFEALGSWGIAFTPHILTVKAGEDVASKIMAFSQQGP 213
Query: 865 HTVCVLSANG 836
TVC+LSANG
Sbjct: 214 RTVCILSANG 223
>gb|ABG66282.1| AT-hook protein 1, putative, expressed [Oryza sativa Japonica
Group] gi|215765047|dbj|BAG86744.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 200
Score = 114 bits (286), Expect = 5e-23
Identities = 73/158 (46%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Frame = -3
Query: 710 YEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSLAGSDGRILGGGVAGMLIAATPVQVVIG 531
YEGRFEIISLSGSFLL E +LAGSDGR+LGG VAGML+AATPVQVV+
Sbjct: 37 YEGRFEIISLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVLGGCVAGMLMAATPVQVVVA 96
Query: 530 SFGAEENPMSELSLREPLLAPAPYMMSFGMPVAAVPPPFPSTYSGSSDETGSPINFSSRA 351
SF AE + R+ AP M+ +P PP T SGSSD++GSPIN S
Sbjct: 97 SFIAEGKKSKPVETRKVEPMSAPPQMATYVPAPVASPPSEGTSSGSSDDSGSPINHSGMP 156
Query: 350 CNDTEQSNQATY------TYSSIG------HANTHSSN 273
N + Q Q Y+S G H N H S+
Sbjct: 157 YNHSGQQQQHQQHQHMPPAYASGGWSLSAHHQNRHDSD 194
>gb|EAZ17056.1| hypothetical protein OsJ_32550 [Oryza sativa Japonica Group]
Length = 274
Score = 114 bits (286), Expect = 5e-23
Identities = 73/158 (46%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Frame = -3
Query: 710 YEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSLAGSDGRILGGGVAGMLIAATPVQVVIG 531
YEGRFEIISLSGSFLL E +LAGSDGR+LGG VAGML+AATPVQVV+
Sbjct: 111 YEGRFEIISLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVLGGCVAGMLMAATPVQVVVA 170
Query: 530 SFGAEENPMSELSLREPLLAPAPYMMSFGMPVAAVPPPFPSTYSGSSDETGSPINFSSRA 351
SF AE + R+ AP M+ +P PP T SGSSD++GSPIN S
Sbjct: 171 SFIAEGKKSKPVETRKVEPMSAPPQMATYVPAPVASPPSEGTSSGSSDDSGSPINHSGMP 230
Query: 350 CNDTEQSNQATY------TYSSIG------HANTHSSN 273
N + Q Q Y+S G H N H S+
Sbjct: 231 YNHSGQQQQHQQHQHMPPAYASGGWSLSAHHQNRHDSD 268
Score = 67.0 bits (162), Expect = 1e-08
Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Frame = -1
Query: 1096 DGGVVLALSP---LSPSEAPNSKNGPNASSYK--PRNRKRPTKKQQLDPFGSAGRGFMAN 932
DG +LA P L+ S++P + A+S P + P GS G F +
Sbjct: 6 DGPGILARGPTTSLTTSDSPPCSHPLPAASLPCGPHTGRLPNSLA-----GSWGIAFTPH 60
Query: 931 VIVVKAGEDIASKIMAFSQQGPHTVCVLSANG 836
++ VKAGED+ASKIMAFSQQGP TVC+LSANG
Sbjct: 61 ILTVKAGEDVASKIMAFSQQGPRTVCILSANG 92
>ref|NP_001065467.1| Os10g0572900 [Oryza sativa Japonica Group]
gi|113639999|dbj|BAF27304.1| Os10g0572900, partial
[Oryza sativa Japonica Group]
Length = 251
Score = 114 bits (286), Expect = 5e-23
Identities = 73/158 (46%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Frame = -3
Query: 710 YEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSLAGSDGRILGGGVAGMLIAATPVQVVIG 531
YEGRFEIISLSGSFLL E +LAGSDGR+LGG VAGML+AATPVQVV+
Sbjct: 88 YEGRFEIISLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVLGGCVAGMLMAATPVQVVVA 147
Query: 530 SFGAEENPMSELSLREPLLAPAPYMMSFGMPVAAVPPPFPSTYSGSSDETGSPINFSSRA 351
SF AE + R+ AP M+ +P PP T SGSSD++GSPIN S
Sbjct: 148 SFIAEGKKSKPVETRKVEPMSAPPQMATYVPAPVASPPSEGTSSGSSDDSGSPINHSGMP 207
Query: 350 CNDTEQSNQATY------TYSSIG------HANTHSSN 273
N + Q Q Y+S G H N H S+
Sbjct: 208 YNHSGQQQQHQQHQHMPPAYASGGWSLSAHHQNRHDSD 245
Score = 74.3 bits (181), Expect = 7e-11
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = -1
Query: 1063 SPSEAPNSKNGPNASSYKPRNRKRPT---KKQQLDPFGSAGRGFMANVIVVKAGEDIASK 893
SP+ PN+K R RP KK+Q + GS G F +++ VKAGED+ASK
Sbjct: 2 SPASDPNAKR-----------RGRPPGSGKKKQFEALGSWGIAFTPHILTVKAGEDVASK 50
Query: 892 IMAFSQQGPHTVCVLSANG 836
IMAFSQQGP TVC+LSANG
Sbjct: 51 IMAFSQQGPRTVCILSANG 69