BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016414
         (1548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|1...   296   1e-77
ref|XP_002520213.1| conserved hypothetical protein [Ricinus comm...   288   3e-75
ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|2...   268   3e-69
gb|AFK35642.1| unknown [Lotus japonicus]                              262   2e-67
ref|XP_003613372.1| SAM domain family protein [Medicago truncatu...   258   3e-66

>ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|118487432|gb|ABK95544.1|
            unknown [Populus trichocarpa] gi|222851683|gb|EEE89230.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  296 bits (757), Expect = 1e-77
 Identities = 181/349 (51%), Positives = 224/349 (64%), Gaps = 18/349 (5%)
 Frame = -3

Query: 1372 SSKPQVTITLGRSGQVVKRKDNSSEYVPTSS--SGTKRSIRDRLGHNNNNYNQPKSKRQR 1199
            +SK +VTITLGRSGQVVKR    S+    S   +G+KRS+ DRLGH  +N      KRQR
Sbjct: 4    TSKARVTITLGRSGQVVKRAATISDDYSNSQQGAGSKRSVMDRLGHQLSN------KRQR 57

Query: 1198 RDGSKKSLTDDGVNGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREKLSRTNQP 1019
             D S  SL  +GV   R++++DLR+KLM+KN  R+  S DD   QK +DLREKLSRT QP
Sbjct: 58   GDSSLTSLGSNGVKDGRIDKDDLRYKLMQKNVFRRAQSDDD---QKTMDLREKLSRTVQP 114

Query: 1018 T-----LRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTKSADDLVQMDSMRNSYSN 854
            +        D RQRMPEP  TDT           +L RIPPT+SADDL  M S RNS+S+
Sbjct: 115  SGHPLSTNLDARQRMPEP--TDT----------SILGRIPPTRSADDLHHMYSSRNSFSS 162

Query: 853  WTLGALRLGSPDRLVGTSRGLSPPRIMDN--RRPVRHVSSITHDASRPTPFIGKDIYDAS 680
            WTL  +R  SPDR++ +SRGLSPPR +DN  RRP+      T+D  R   ++ KD+ D  
Sbjct: 163  WTLDHIRRRSPDRVISSSRGLSPPRNVDNLQRRPLNR----TYDDFRTVSYMNKDVLDTP 218

Query: 679  RP----STFMPTISVPLEAAKPVVRLPP-----PTAPGITQKISYMGEETVTVSGLLHSL 527
            R     STFM   ++P  +  P   + P     P + G+  K SY  EE  TV GLLHSL
Sbjct: 219  RSVSSSSTFMTKSAMPPPSTVPATSVAPRMSQLPPSSGLVHKSSYAAEEQQTVEGLLHSL 278

Query: 526  GLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSK 380
            GLGKYAI+F+AEE+DM ALKQMG+ DLKELGIPMGPRKKILL++  RSK
Sbjct: 279  GLGKYAILFKAEEIDMPALKQMGESDLKELGIPMGPRKKILLALLPRSK 327


>ref|XP_002520213.1| conserved hypothetical protein [Ricinus communis]
            gi|223540705|gb|EEF42268.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 334

 Score =  288 bits (737), Expect = 3e-75
 Identities = 177/348 (50%), Positives = 227/348 (65%), Gaps = 16/348 (4%)
 Frame = -3

Query: 1372 SSKPQVTITLGRSGQVVKRKDNSSEYVPTSSSGTKRSIRDRLGHNNNNYN-----QPKSK 1208
            +SK +VTITLGR+GQVVKR    S+      +G+KRS+RDRLG N ++ +     QP +K
Sbjct: 4    ASKGRVTITLGRTGQVVKRAAVVSDV--QYGAGSKRSVRDRLGTNFDSSSSRGGAQPNNK 61

Query: 1207 RQRRDGSKKSLTDDGVNGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREKLSRT 1028
            RQR +    SL+ +GV+ VR++++DLR KLM+KN SR+  S+   ++Q  +DLREKLSRT
Sbjct: 62   RQRGESYLTSLSSNGVDDVRIDKDDLRLKLMQKNASRRAPSN---YEQSTMDLREKLSRT 118

Query: 1027 NQPTLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTKSADDLVQMDSMRNSYSNWT 848
              P          P     DTRQ M  PK   +L RIP T+SADDL +MDS RNSYS WT
Sbjct: 119  VHPP--------GPSLRIVDTRQHMPAPKEASILGRIPSTRSADDLPRMDSSRNSYSPWT 170

Query: 847  LGALRLGSPDRLVGTSRGLSPPRIMDN--RRPVRHVSSITHDASRPTPFIGKDIYDASRP 674
            L  +R  SPDR++G+SR LSPPR ++   RRP+    S T D +R   ++ KD+ D  RP
Sbjct: 171  LDHIRRRSPDRIIGSSRALSPPRNVEEIQRRPL----SRTLDDARAVSYMSKDVLDGRRP 226

Query: 673  -----STFMPTISVPLEAAKPVV----RLPPPTAPGITQKISYMGEETVTVSGLLHSLGL 521
                 + FM    +P  + KP      ++PPP   GI QK SY  EE  TV  LLHSLGL
Sbjct: 227  VGSSTTAFMAKPVLPTVSTKPAAPILGQIPPPC--GILQKASYAVEEPQTVESLLHSLGL 284

Query: 520  GKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSKR 377
            GKYAI+F+AEEVDMTALKQM + DLKELGIPMGPRKKILL++  R+KR
Sbjct: 285  GKYAILFKAEEVDMTALKQMRESDLKELGIPMGPRKKILLALLPRTKR 332


>ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|222851612|gb|EEE89159.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  268 bits (685), Expect = 3e-69
 Identities = 165/337 (48%), Positives = 213/337 (63%), Gaps = 21/337 (6%)
 Frame = -3

Query: 1372 SSKPQVTITLGRSGQVVKRKDNSSEYVPTSS--SGTKRSIRDRLGHNNN----NYNQPKS 1211
            +SK +VTITLGR GQVVKR    S+    S   +G+KRS+ +RLG N++    + NQ  +
Sbjct: 4    TSKARVTITLGRGGQVVKRAATVSDDYSNSQQGAGSKRSVMERLGSNSDILSLHGNQLSN 63

Query: 1210 KRQRRDGSKKSLTDDGVNGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREKLSR 1031
            KRQR D S  SL  +GV   R+ ++DLR+KLM+KN   +  S DD   QK +DLREKLSR
Sbjct: 64   KRQRGDNSLTSLGANGVEDARIGKDDLRYKLMQKNVFSRTQSDDD---QKTMDLREKLSR 120

Query: 1030 TNQPTLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTKSADDLVQMDSMRNSYSNW 851
            T         R   P     D R  + +PK T +L RIPPT+SAD L  MDS RNS+S W
Sbjct: 121  T--------VRSPGPLLSNLDARHCLPDPKDTSILGRIPPTRSADVLHHMDSSRNSFSPW 172

Query: 850  TLGALRLGSPDRLVGTSRGLSPPRIMDN--RRPVRHVSSITHDASRPTPFIGKDIYDASR 677
            TL  +R  SPDR++ +S GLSPPR MDN  RRP+      T+DA R  P++ KD+ D  R
Sbjct: 173  TLDHIRRRSPDRVMSSSGGLSPPRNMDNLQRRPLNR----TYDAVRTVPYMNKDVLDTPR 228

Query: 676  P----STFM---------PTISVPLEAAKPVVRLPPPTAPGITQKISYMGEETVTVSGLL 536
                 +TF+         P+ +VP ++  P++   PP+  GI QK SY+ EE  TV GLL
Sbjct: 229  SVSSSTTFITKSAMLPLSPSPTVPAKSVVPLMGHLPPS--GIVQKSSYVAEEQQTVEGLL 286

Query: 535  HSLGLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPM 425
            HSLGLGKY ++F+AEE+DMTALKQMG+ DLKELGIPM
Sbjct: 287  HSLGLGKYVVLFKAEEIDMTALKQMGERDLKELGIPM 323


>gb|AFK35642.1| unknown [Lotus japonicus]
          Length = 338

 Score =  262 bits (670), Expect = 2e-67
 Identities = 162/358 (45%), Positives = 229/358 (63%), Gaps = 24/358 (6%)
 Frame = -3

Query: 1372 SSKPQVTITLGRSGQVVKRKDNSSEYV---PTSSSGTKRSIRDRLGHNNNNY-----NQP 1217
            +S+ +VTITLGRSGQVVKR  + ++       SS+G+KRS+RDR+G N ++         
Sbjct: 4    TSRGRVTITLGRSGQVVKRDVSGADVAFSSSVSSAGSKRSVRDRIGSNADSSMWHGNGLA 63

Query: 1216 KSKRQRRDGSKKSLTDDGVNGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREKL 1037
             +KRQR D S ++  DDG    R+ ++DLR KL++K+ SR+  S+D   K+++ DLREKL
Sbjct: 64   SNKRQRGDMSSRNGLDDG----RIGKDDLRLKLIQKSASRQAESND---KKRHGDLREKL 116

Query: 1036 SRTNQPTLRT-DTRQRMPEPEATDTRQGMREPKATGLLRRIPPTKSADDLVQMDSMRNSY 860
            S+  QP   + +++ RMPEP            +   LLR++PP +S+DDL++M+SMR+SY
Sbjct: 117  SKAVQPPRDSFNSKPRMPEP------------RERSLLRQLPPARSSDDLMRMESMRSSY 164

Query: 859  SNWTLGALRLGSPDRLVGTSRGLSPPRIMDN--RRPVRHVSSITHDASRPTPFIGKDIYD 686
            S WTL  +R  SPD    TSRG+SP R   +  RRP+      T+D++R  P++G+D+ +
Sbjct: 165  SPWTLDHIRQRSPDGFPSTSRGISPQRNAGDLQRRPLNR----TYDSARSVPYVGRDVLE 220

Query: 685  ASRPSTFMPTI--------SVPLEAAKPVVRLPP--PTAPGITQKISYMGEE---TVTVS 545
             SRP +  P          ++P   AK V   P   P +  +  + SY G+E     TV 
Sbjct: 221  TSRPPSTAPASFMSRSTMSTLPPVTAKSVASHPGQLPPSSSVAPRASYAGDEHQSQQTVD 280

Query: 544  GLLHSLGLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSKR*H 371
            GLLH+LGLGKY I+F+AEEVDMTALKQMG++DLKELGIPMGPRKKILL++  R+KR H
Sbjct: 281  GLLHALGLGKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALMPRTKRPH 338


>ref|XP_003613372.1| SAM domain family protein [Medicago truncatula]
            gi|355514707|gb|AES96330.1| SAM domain family protein
            [Medicago truncatula]
          Length = 336

 Score =  258 bits (659), Expect = 3e-66
 Identities = 160/353 (45%), Positives = 225/353 (63%), Gaps = 22/353 (6%)
 Frame = -3

Query: 1372 SSKPQVTITLGRSGQVVKRKDNSSEYVPTSSS----GTKRSIRDRLGHNNNNYNQ----- 1220
            SS+ ++TITLGRSGQVVKR D ++  VP SSS    GTKRS+RDR+G++ ++  +     
Sbjct: 4    SSRGRITITLGRSGQVVKR-DVTAVDVPYSSSMSSAGTKRSVRDRIGYSGDSSMRHGNGV 62

Query: 1219 PKSKRQRRDGSKKSLTDDGVNGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREK 1040
              +KRQR D S ++  DDG    R+ ++DLR KLMRK+ SR+  S+D+    +N+DLREK
Sbjct: 63   SGNKRQRGDASMRNGPDDG----RIGKDDLRLKLMRKSASRRDESNDNN---RNVDLREK 115

Query: 1039 LSRT-NQPTLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTKSADDLVQMDSMRNS 863
            L +T + PT   +++Q MPEP         REP    L R +P  +S+DD+++M+SMRNS
Sbjct: 116  LKKTAHPPTNSFNSKQHMPEP---------REPS---LFRPVPSARSSDDIMRMESMRNS 163

Query: 862  YSNWTLGALRLGSPDRLVGTSRGLSPPRIMDNRRPVRHVSSITHDASRPTPFIGKDIYDA 683
            YS WTL  +R  SP+    TSRG+SP R   +  P R   + T+D  RP  + G+D+ + 
Sbjct: 164  YSPWTLDQIRQRSPEEYPSTSRGISPQRNAGD--PQRRPLNRTYDGVRPVQYAGRDVLET 221

Query: 682  SRPSTFMPTISVP---LEAAKPVVRLPPPTAPG-------ITQKISYMGEETV--TVSGL 539
            SRP +  P+  +P   +    PV   P P+ PG       + Q+  ++G E    TV GL
Sbjct: 222  SRPPSAAPSSFMPRSTMSTLPPVTAKPVPSHPGRLPPSGSVPQRPPFVGNEQQPQTVDGL 281

Query: 538  LHSLGLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSK 380
            L +LGL KY I+F+AEEVDMTAL+QMG++DLKELGIPMGPRKK+LL++  R +
Sbjct: 282  LQALGLQKYQILFKAEEVDMTALRQMGENDLKELGIPMGPRKKLLLALLPRKR 334