BLASTX nr result

ID: Coptis23_contig00016384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016384
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15323.3| unnamed protein product [Vitis vinifera]              121   9e-26
ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial...   121   9e-26
ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-...   110   1e-22
ref|XP_003525439.1| PREDICTED: uncharacterized protein C13E7.11-...   105   7e-21
gb|EEC71529.1| hypothetical protein OsI_03840 [Oryza sativa Indi...   100   2e-19

>emb|CBI15323.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  121 bits (303), Expect = 9e-26
 Identities = 68/135 (50%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
 Frame = -1

Query: 392 RSYHGFLANPVLLKGVVANAHLRNQSKKFI-DHVLFMRSQLQRRGY----QVHRYNTPRY 228
           RS +GF++NP LLK  +  A L+  SK      V F+R+Q  RR +        Y     
Sbjct: 95  RSVYGFISNPTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWR 154

Query: 227 NWRSSIPTADNVVLGLISANVAVFLLWGYLDTSFMRKHFMISVENVRSGRVHTMITSAFS 48
           +W S + T D VVLGLI ANVAVF+LW   D  FM  +F IS++N +SGR+HT+ITSAFS
Sbjct: 155 SWLSGLSTND-VVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSAFS 213

Query: 47  HIDVRHLLSNMIGLY 3
           HID+ HL+SNMIGLY
Sbjct: 214 HIDIGHLISNMIGLY 228


>ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera]
          Length = 333

 Score =  121 bits (303), Expect = 9e-26
 Identities = 68/135 (50%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
 Frame = -1

Query: 392 RSYHGFLANPVLLKGVVANAHLRNQSKKFI-DHVLFMRSQLQRRGY----QVHRYNTPRY 228
           RS +GF++NP LLK  +  A L+  SK      V F+R+Q  RR +        Y     
Sbjct: 66  RSVYGFISNPTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWR 125

Query: 227 NWRSSIPTADNVVLGLISANVAVFLLWGYLDTSFMRKHFMISVENVRSGRVHTMITSAFS 48
           +W S + T D VVLGLI ANVAVF+LW   D  FM  +F IS++N +SGR+HT+ITSAFS
Sbjct: 126 SWLSGLSTND-VVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSAFS 184

Query: 47  HIDVRHLLSNMIGLY 3
           HID+ HL+SNMIGLY
Sbjct: 185 HIDIGHLISNMIGLY 199


>ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-like [Cucumis sativus]
          Length = 336

 Score =  110 bits (276), Expect = 1e-22
 Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 16/161 (9%)
 Frame = -1

Query: 437 GSITQTTLKHSFNSWRSY-------HGFLANPVLLKGVV---ANAHLRNQSKKFID-HVL 291
           GS     ++    SW S+       HGF + PV+ K  +   +N + +   K  ++   L
Sbjct: 43  GSFVTRPIQDHSRSWSSHRSFAQKIHGFFSVPVVGKRFIVNPSNTYFKGSMKSVVESRSL 102

Query: 290 FMRSQLQRRGYQ-----VHRYNTPRYNWRSSIPTADNVVLGLISANVAVFLLWGYLDTSF 126
           F  +   +  +Q     VH++   R +W   + T + VVLGLI ANVAVFLLW   D  F
Sbjct: 103 FTGTPFSKLKFQLKPGFVHQWGGRR-SWFQRL-TPNEVVLGLIIANVAVFLLWRIADPIF 160

Query: 125 MRKHFMISVENVRSGRVHTMITSAFSHIDVRHLLSNMIGLY 3
           M K+F IS+ENVRSGR+HT+ITSAFSHID  H++SNM+GLY
Sbjct: 161 MSKNFTISLENVRSGRIHTLITSAFSHIDTGHIVSNMVGLY 201


>ref|XP_003525439.1| PREDICTED: uncharacterized protein C13E7.11-like [Glycine max]
          Length = 336

 Score =  105 bits (261), Expect = 7e-21
 Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 7/143 (4%)
 Frame = -1

Query: 410 HSFNSWRSY----HGFLANPVLLKGVVANAHLRNQSKKFIDHVLFMRSQLQRRGYQV-HR 246
           H F+S RS+      FL+ P++ +    N  LR  ++              R  +   H 
Sbjct: 61  HHFHSCRSFSTKFRAFLSQPMISRHFAFNPLLRVSARSLQIGCRPSLHYFIRHNFNFSHN 120

Query: 245 YNTPRYNWRSSIP--TADNVVLGLISANVAVFLLWGYLDTSFMRKHFMISVENVRSGRVH 72
           ++  R +WRS +   TA+++VLGLI ANVA+FLLW   D +FM K+F IS++N +SGR+H
Sbjct: 121 HDFSRRSWRSWLRGLTANDMVLGLIIANVAIFLLWRIADQNFMIKNFTISLDNFKSGRLH 180

Query: 71  TMITSAFSHIDVRHLLSNMIGLY 3
           T+IT+AFSH+D  H++SNMIGLY
Sbjct: 181 TLITNAFSHVDTWHIVSNMIGLY 203


>gb|EEC71529.1| hypothetical protein OsI_03840 [Oryza sativa Indica Group]
          Length = 327

 Score =  100 bits (249), Expect = 2e-19
 Identities = 44/75 (58%), Positives = 59/75 (78%)
 Frame = -1

Query: 227 NWRSSIPTADNVVLGLISANVAVFLLWGYLDTSFMRKHFMISVENVRSGRVHTMITSAFS 48
           +W   +P+AD  VL L+ ANV VF+LW   D SFMR+HFMIS++N +SGR+HT++T+AFS
Sbjct: 117 SWAKWLPSADGAVLMLVGANVGVFMLWHLADPSFMRRHFMISLDNFKSGRLHTLLTNAFS 176

Query: 47  HIDVRHLLSNMIGLY 3
           H +  HL+SNMIGLY
Sbjct: 177 HAESGHLISNMIGLY 191


Top