BLASTX nr result

ID: Coptis23_contig00016378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016378
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328116.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002523817.1| expressed protein, putative [Ricinus communi...    76   3e-12
ref|XP_004167882.1| PREDICTED: protein transport protein Sec24-l...    75   4e-12
ref|XP_004139490.1| PREDICTED: protein transport protein SEC24-1...    75   4e-12
ref|XP_003632282.1| PREDICTED: protein transport protein Sec24-l...    75   5e-12

>ref|XP_002328116.1| predicted protein [Populus trichocarpa] gi|222837631|gb|EEE75996.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = +3

Query: 249 PTTSWERTTASRQGFDGVLPGGRGFGLVMEGLIKCLGSEYGNAFAL 386
           PTTSWERTT + QG DGVL GGRGFG+ ME L+K LGSEYGN FAL
Sbjct: 224 PTTSWERTTGAGQGLDGVLMGGRGFGVAMEALLKYLGSEYGNTFAL 269


>ref|XP_002523817.1| expressed protein, putative [Ricinus communis]
           gi|223536905|gb|EEF38543.1| expressed protein, putative
           [Ricinus communis]
          Length = 740

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/46 (76%), Positives = 37/46 (80%)
 Frame = +3

Query: 249 PTTSWERTTASRQGFDGVLPGGRGFGLVMEGLIKCLGSEYGNAFAL 386
           PTTSWERTT + QG DGVL GGRGFG+ ME L K LGSEYGN FAL
Sbjct: 220 PTTSWERTTGAGQGLDGVLMGGRGFGVAMEALFKYLGSEYGNTFAL 265


>ref|XP_004167882.1| PREDICTED: protein transport protein Sec24-like At3g07100-like,
           partial [Cucumis sativus]
          Length = 559

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = +3

Query: 249 PTTSWERTTASRQGFDGVLPGGRGFGLVMEGLIKCLGSEYGNAFAL 386
           PTTSWERTTA+ QG DG+L GGRGFG+ ME L+  LGSEYGN FAL
Sbjct: 224 PTTSWERTTAAGQGIDGILMGGRGFGVAMEALLNYLGSEYGNIFAL 269


>ref|XP_004139490.1| PREDICTED: protein transport protein SEC24-1-like [Cucumis sativus]
          Length = 742

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = +3

Query: 249 PTTSWERTTASRQGFDGVLPGGRGFGLVMEGLIKCLGSEYGNAFAL 386
           PTTSWERTTA+ QG DG+L GGRGFG+ ME L+  LGSEYGN FAL
Sbjct: 224 PTTSWERTTAAGQGIDGILMGGRGFGVAMEALLNYLGSEYGNIFAL 269


>ref|XP_003632282.1| PREDICTED: protein transport protein Sec24-like At3g07100 isoform 2
           [Vitis vinifera]
          Length = 760

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/48 (70%), Positives = 39/48 (81%)
 Frame = +3

Query: 249 PTTSWERTTASRQGFDGVLPGGRGFGLVMEGLIKCLGSEYGNAFALGV 392
           PTTSWERT+A+ QG DG+L GGRGFG+ ME L   LGSEYG+ FALGV
Sbjct: 224 PTTSWERTSAAGQGLDGILLGGRGFGVAMEALFNYLGSEYGSTFALGV 271


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