BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016368
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|2...   159   4e-37
ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi...   151   1e-34
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]   148   8e-34
ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containi...   146   3e-33
ref|XP_003637306.1| Pentatricopeptide repeat-containing protein,...   143   2e-32

>ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|222869372|gb|EEF06503.1|
           predicted protein [Populus trichocarpa]
          Length = 715

 Score =  159 bits (402), Expect = 4e-37
 Identities = 82/151 (54%), Positives = 105/151 (69%)
 Frame = +1

Query: 154 EQLQTQSFISNICNLVQQSYHQQHLHLTSSFKHKPLYLKLNPSLITPEQAVTIFASLFTH 333
           + LQ QS + +IC+LV +SY QQ  H+    +   + L +NP  +T EQA+T+ ASL + 
Sbjct: 60  QHLQQQSLVRSICSLVCESYSQQTPHVRL-LQSPSINLSVNPDSLTHEQAITVVASLASE 118

Query: 334 AGSMVALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVN 513
           AGSMVALSFF WA+  P+FRYFMRFYI+  T FI + N ERAHEVM C+V  FAEIGK  
Sbjct: 119 AGSMVALSFFNWAIGFPKFRYFMRFYIVCATSFIGNENFERAHEVMDCMVRVFAEIGKFQ 178

Query: 514 DAVNLVIDMGNQGLVPNVHTLNYILGVLVEL 606
           +AVN+VI+M N GLV  V TLN + GV  E+
Sbjct: 179 EAVNMVIEMENHGLVLTVRTLNCVTGVAGEM 209


>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  151 bits (381), Expect = 1e-34
 Identities = 78/149 (52%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
 Frame = +1

Query: 157 QLQTQSFISNICNLVQQSYHQQ-HLHLTSSFKHKPLYLKLNPSLITPEQAVTIFASLFTH 333
           Q  +QS +  IC+LV QSY+QQ H+  T    H PL    +   +T +QA+T+ ASL   
Sbjct: 56  QSHSQSVVRTICSLVCQSYYQQTHVRFTPPKLHLPL----DSESLTHDQAITVVASLADE 111

Query: 334 AGSMVALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVN 513
           AGSMVALSF YWA+  P+FR+FMR YI+  T  I + NLERA+EVM+C+V +FAE GK+ 
Sbjct: 112 AGSMVALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGKLK 171

Query: 514 DAVNLVIDMGNQGLVPNVHTLNYILGVLV 600
           +AVN+V++M NQGLVP+  TLN +L V V
Sbjct: 172 EAVNMVVEMQNQGLVPSTQTLNCVLDVAV 200


>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  148 bits (373), Expect = 8e-34
 Identities = 77/149 (51%), Positives = 103/149 (69%), Gaps = 1/149 (0%)
 Frame = +1

Query: 157 QLQTQSFISNICNLVQQSYHQQ-HLHLTSSFKHKPLYLKLNPSLITPEQAVTIFASLFTH 333
           Q  +QS +  IC+LV QSY+QQ H+  T    H PL    +   +T +QA+T+ ASL   
Sbjct: 56  QSHSQSVVRTICSLVCQSYYQQTHVRFTPPKLHLPL----DSESLTHDQAITVVASLADE 111

Query: 334 AGSMVALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVN 513
           AGSMVALSF YWA+  P+FR+FMR YI+  T  I + NLERA+EVM+C+V +FAE GK+ 
Sbjct: 112 AGSMVALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGKLK 171

Query: 514 DAVNLVIDMGNQGLVPNVHTLNYILGVLV 600
           +AVN+V++M NQGLV +  TLN +L V V
Sbjct: 172 EAVNMVVEMQNQGLVXSTQTLNCVLDVAV 200


>ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  146 bits (368), Expect = 3e-33
 Identities = 70/146 (47%), Positives = 104/146 (71%)
 Frame = +1

Query: 169 QSFISNICNLVQQSYHQQHLHLTSSFKHKPLYLKLNPSLITPEQAVTIFASLFTHAGSMV 348
           QS ++ +C+LV  SYH  + H  + F    L+L ++P+ +T +QAVTI ASL + AGSMV
Sbjct: 37  QSTVTRVCSLVYDSYHHHYNH--ARFSPPTLHLDVDPNSLTHDQAVTIVASLASDAGSMV 94

Query: 349 ALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKVNDAVNL 528
           ALSFF WA++  +FR+F R YI      I + N E+AHEVM+C+V+SFAEIG+V +A+ +
Sbjct: 95  ALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEM 154

Query: 529 VIDMGNQGLVPNVHTLNYILGVLVEL 606
           VI+M NQGL P+  TLN+++ ++ E+
Sbjct: 155 VIEMHNQGLAPSTKTLNWVVKIVTEM 180


>ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355503241|gb|AES84444.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 603

 Score =  143 bits (361), Expect = 2e-32
 Identities = 74/152 (48%), Positives = 107/152 (70%), Gaps = 2/152 (1%)
 Frame = +1

Query: 157 QLQ--TQSFISNICNLVQQSYHQQHLHLTSSFKHKPLYLKLNPSLITPEQAVTIFASLFT 330
           QLQ  +Q+ +  +C+LV +SY+Q H H+  S +   L+  +    +T EQAV++ ASL +
Sbjct: 35  QLQPISQTMVQRVCSLVCESYNQ-HAHMRVSSQR--LHFGIEVDFLTHEQAVSVVASLAS 91

Query: 331 HAGSMVALSFFYWAVSLPEFRYFMRFYIIPTTCFIDSGNLERAHEVMRCLVESFAEIGKV 510
            AGSMV LSFF+WA+  P+FR+FMR YI+     I + N E+A EVMRC+VESF+E+G++
Sbjct: 92  DAGSMVTLSFFHWAIGYPKFRHFMRLYIVCAMSLIGNRNSEKACEVMRCMVESFSEVGRL 151

Query: 511 NDAVNLVIDMGNQGLVPNVHTLNYILGVLVEL 606
            +AV +VI+M NQGLVPN  TLN+I+ V  E+
Sbjct: 152 KEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEM 183