BLASTX nr result

ID: Coptis23_contig00016366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016366
         (1677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267...   198   4e-48
ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-46
ref|XP_002531881.1| peripheral-type benzodiazepine receptor, put...   191   5e-46
ref|XP_002301472.1| predicted protein [Populus trichocarpa] gi|2...   187   7e-45
emb|CAH10765.1| peripheral-type benzodiazepine receptor [Solanum...   182   2e-43

>ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267613 [Vitis vinifera]
          Length = 185

 Score =  198 bits (503), Expect = 4e-48
 Identities = 95/148 (64%), Positives = 114/148 (77%)
 Frame = +1

Query: 187 RGLRSLTIAIVLPLILTFITIYLFSRSGQNYYNLKRPFWFPSLWALHTGYIVSSLLMGLS 366
           RGLRSLT A+ +PL LT +TIY FS +   Y  L +PFWFP LWA+H   + SSLLMGLS
Sbjct: 35  RGLRSLTTAVSIPLSLTLVTIY-FSGATDRYRTLPKPFWFPPLWAVHATSMASSLLMGLS 93

Query: 367 AWLVWAEGGFHKQPSAVPLYFGQLLLSLVWYPLVFKVGARWIGLFVCIGLFAALVGCSKR 546
           AWLVWAEGGFHK+P+A+PL+  QL LSL+  P+VF  G   +GL VC+GLF ALVGC++ 
Sbjct: 94  AWLVWAEGGFHKKPTALPLFVAQLALSLIRDPIVFGYGGTRVGLVVCMGLFGALVGCARM 153

Query: 547 FREVNPIAGDLVKPCLAWVAYLTLVNSK 630
           FREVNPIAGDLVKPCLAW AY+ +V  K
Sbjct: 154 FREVNPIAGDLVKPCLAWTAYVGVVTLK 181


>ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|222861790|gb|EEE99332.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  192 bits (489), Expect = 2e-46
 Identities = 89/151 (58%), Positives = 111/151 (73%), Gaps = 3/151 (1%)
 Frame = +1

Query: 187 RGLRSLTIAIVLPLILTFITIYLFSRS---GQNYYNLKRPFWFPSLWALHTGYIVSSLLM 357
           RG+RSL IA+ LPL LT   +Y F  +   G +  ++  PFWFP  WALH   + SS LM
Sbjct: 45  RGIRSLAIAVALPLSLTISNLYFFGTTRGYGTSTGSISMPFWFPPPWALHLTCMTSSFLM 104

Query: 358 GLSAWLVWAEGGFHKQPSAVPLYFGQLLLSLVWYPLVFKVGARWIGLFVCIGLFAALVGC 537
           GLSAWLVWAEGGFH+ P+A+ LY  QL LSL W P+VF++ A W+GL VC+  FA LVGC
Sbjct: 105 GLSAWLVWAEGGFHRNPAALYLYLAQLGLSLAWEPIVFRMAAPWVGLLVCLATFAVLVGC 164

Query: 538 SKRFREVNPIAGDLVKPCLAWVAYLTLVNSK 630
           S++F+EVNPIAGDLVKPCLAW ++L +VN K
Sbjct: 165 SRQFKEVNPIAGDLVKPCLAWASFLAIVNLK 195


>ref|XP_002531881.1| peripheral-type benzodiazepine receptor, putative [Ricinus
           communis] gi|223528489|gb|EEF30518.1| peripheral-type
           benzodiazepine receptor, putative [Ricinus communis]
          Length = 190

 Score =  191 bits (485), Expect = 5e-46
 Identities = 89/149 (59%), Positives = 111/149 (74%), Gaps = 1/149 (0%)
 Frame = +1

Query: 187 RGLRSLTIAIVLPLILTFITIYLF-SRSGQNYYNLKRPFWFPSLWALHTGYIVSSLLMGL 363
           RG+RSL IA+  PL LT   IY F SR+G    + K PFWFP +WALH   + SS LMGL
Sbjct: 39  RGIRSLAIAVAFPLSLTLFNIYFFGSRNGYGPLSTK-PFWFPPMWALHFTCLASSFLMGL 97

Query: 364 SAWLVWAEGGFHKQPSAVPLYFGQLLLSLVWYPLVFKVGARWIGLFVCIGLFAALVGCSK 543
           SAWLVWAEGGFHK+P+A+  Y  QL L L+W P+VF++ A W+GL VC+ +F +LVGCS+
Sbjct: 98  SAWLVWAEGGFHKKPAALSFYLAQLGLGLIWDPIVFRMDATWVGLVVCLAMFGSLVGCSR 157

Query: 544 RFREVNPIAGDLVKPCLAWVAYLTLVNSK 630
           +F+EVNPIAGDLVKP L W A+L +VN K
Sbjct: 158 QFKEVNPIAGDLVKPSLTWAAFLAIVNLK 186


>ref|XP_002301472.1| predicted protein [Populus trichocarpa]
           gi|224100985|ref|XP_002334319.1| predicted protein
           [Populus trichocarpa] gi|222843198|gb|EEE80745.1|
           predicted protein [Populus trichocarpa]
           gi|222870389|gb|EEF07520.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score =  187 bits (475), Expect = 7e-45
 Identities = 86/152 (56%), Positives = 109/152 (71%), Gaps = 4/152 (2%)
 Frame = +1

Query: 187 RGLRSLTIAIVLPLILTFITIYLFSRSG----QNYYNLKRPFWFPSLWALHTGYIVSSLL 354
           RG+RSL IA+ LPL L    +Y F  +      +  ++ +PFWFP LWALH   + SS L
Sbjct: 42  RGIRSLAIAVALPLSLALCNVYFFGSTKGYGTSSSRSISKPFWFPPLWALHMTCVTSSFL 101

Query: 355 MGLSAWLVWAEGGFHKQPSAVPLYFGQLLLSLVWYPLVFKVGARWIGLFVCIGLFAALVG 534
           MGLSAWLVWAEGGFH+ P+A+ LY  QL LSL W P+VF++ A W+GL VC+  F ALVG
Sbjct: 102 MGLSAWLVWAEGGFHRNPTALYLYLTQLGLSLAWDPIVFRMSAPWVGLLVCLATFGALVG 161

Query: 535 CSKRFREVNPIAGDLVKPCLAWVAYLTLVNSK 630
           CS++F+EVNPIAG+LV PCLAW ++L  VN K
Sbjct: 162 CSRQFKEVNPIAGNLVMPCLAWASFLAFVNLK 193


>emb|CAH10765.1| peripheral-type benzodiazepine receptor [Solanum tuberosum]
          Length = 192

 Score =  182 bits (462), Expect = 2e-43
 Identities = 86/141 (60%), Positives = 105/141 (74%)
 Frame = +1

Query: 187 RGLRSLTIAIVLPLILTFITIYLFSRSGQNYYNLKRPFWFPSLWALHTGYIVSSLLMGLS 366
           RGL+SLTIA+ +PL+LT I I LF  S Q Y ++++PFWFP LWALH   + SSLLMGLS
Sbjct: 53  RGLKSLTIALTIPLLLTLIDISLFGSSYQ-YVSMEKPFWFPRLWALHLACLGSSLLMGLS 111

Query: 367 AWLVWAEGGFHKQPSAVPLYFGQLLLSLVWYPLVFKVGARWIGLFVCIGLFAALVGCSKR 546
           AWLVWAEGGFH++P A+ LY  QL LSL W P+VFK GA  IGL +C+ LF  L+ C + 
Sbjct: 112 AWLVWAEGGFHRKPMAMLLYLSQLGLSLAWDPVVFKSGATRIGLVLCMALFGVLIACFRA 171

Query: 547 FREVNPIAGDLVKPCLAWVAY 609
           F+ VNPIAGDLVKPC  W  +
Sbjct: 172 FKNVNPIAGDLVKPCFGWAGF 192


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