BLASTX nr result

ID: Coptis23_contig00016343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016343
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16561.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002285750.1| PREDICTED: uncharacterized protein LOC100253...    78   7e-13
gb|ABK96645.1| unknown [Populus trichocarpa x Populus deltoides]       74   2e-11
ref|XP_003524996.1| PREDICTED: uncharacterized protein LOC100807...    72   6e-11
ref|XP_002513402.1| yth domain-containing protein, putative [Ric...    70   2e-10

>emb|CBI16561.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 14/76 (18%)
 Frame = +2

Query: 83  MATVNPPAEQAADLLHKLSLDSQTKTLEVADANNKPGGSV--------------QSVDRC 220
           MA V PPA+QAA+LL KLSLDSQTKTLE+ +   KP G+               QS +R 
Sbjct: 1   MAAVAPPADQAAELLQKLSLDSQTKTLEIPEPTKKPSGNQFGAVDGGDAANGQNQSCERS 60

Query: 221 VTPILPDFMDPTVCYV 268
           VTP+L +FMDP+VCYV
Sbjct: 61  VTPLLQEFMDPSVCYV 76


>ref|XP_002285750.1| PREDICTED: uncharacterized protein LOC100253534 [Vitis vinifera]
          Length = 705

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 14/76 (18%)
 Frame = +2

Query: 83  MATVNPPAEQAADLLHKLSLDSQTKTLEVADANNKPGGSV--------------QSVDRC 220
           MA V PPA+QAA+LL KLSLDSQTKTLE+ +   KP G+               QS +R 
Sbjct: 1   MAAVAPPADQAAELLQKLSLDSQTKTLEIPEPTKKPSGNQFGAVDGGDAANGQNQSCERS 60

Query: 221 VTPILPDFMDPTVCYV 268
           VTP+L +FMDP+VCYV
Sbjct: 61  VTPLLQEFMDPSVCYV 76


>gb|ABK96645.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 615

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = +2

Query: 83  MATVNPPAEQAADLLHKLSLDSQTKTLEVADANNKPGGSVQSVDRCVTPILPDFMDPTVC 262
           MAT++  AEQ +DLL KLS+DSQTKTL++ +  NK    +Q  DR VTP+L +FMDPTVC
Sbjct: 1   MATLSSSAEQTSDLLQKLSIDSQTKTLDMPEPTNK----IQPSDRSVTPVLSNFMDPTVC 56

Query: 263 YV 268
           Y+
Sbjct: 57  YL 58


>ref|XP_003524996.1| PREDICTED: uncharacterized protein LOC100807919 [Glycine max]
          Length = 660

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 14/76 (18%)
 Frame = +2

Query: 83  MATVNPPAEQAADLLHKLSLDSQTKTLEV--------------ADANNKPGGSVQSVDRC 220
           MATV  PA+QA DLL KLSL++Q K LE+               D+ N   G +QS DR 
Sbjct: 1   MATVANPADQATDLLQKLSLETQPKPLEIPEPTKKATGNQYGSVDSGNAANGQIQSYDRS 60

Query: 221 VTPILPDFMDPTVCYV 268
           VTP+L DF+DPT+CY+
Sbjct: 61  VTPVLQDFIDPTMCYL 76


>ref|XP_002513402.1| yth domain-containing protein, putative [Ricinus communis]
           gi|223547310|gb|EEF48805.1| yth domain-containing
           protein, putative [Ricinus communis]
          Length = 636

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 14/76 (18%)
 Frame = +2

Query: 83  MATVNPPAEQAADLLHKLSLDSQTKTLEVADANNK--------------PGGSVQSVDRC 220
           MATV P AE+ ADLL  LSLDSQTK LE+ +   K                G +Q  +R 
Sbjct: 1   MATVAPSAEKTADLLQNLSLDSQTKPLEIPEPTKKTSVYQYGAVDSGVSANGQIQPTERS 60

Query: 221 VTPILPDFMDPTVCYV 268
           +TP LPD MDPTVCY+
Sbjct: 61  LTPFLPDLMDPTVCYL 76


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