BLASTX nr result

ID: Coptis23_contig00016340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016340
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299379.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_003635008.1| PREDICTED: DNA replication licensing factor ...   140   1e-31
emb|CBI29412.3| unnamed protein product [Vitis vinifera]              140   1e-31
emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera]   140   1e-31
gb|AAN73052.2| mini-chromosome maintenance protein MCM6 [Pisum s...   139   3e-31

>ref|XP_002299379.1| predicted protein [Populus trichocarpa] gi|222846637|gb|EEE84184.1|
           predicted protein [Populus trichocarpa]
          Length = 842

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/91 (75%), Positives = 81/91 (89%)
 Frame = +3

Query: 255 VIFTGTLVVIPDIMALASPGERAECRRERSQCPKSSGGNEGVRGLRALGVRDLSYRLAFI 434
           VIFTGT+VV+PDI+ALASPGERAECRRE SQ   S+ G EGVRGLRALGVRDLSYRLAFI
Sbjct: 242 VIFTGTVVVVPDILALASPGERAECRRESSQLKNSAVGGEGVRGLRALGVRDLSYRLAFI 301

Query: 435 ANSVKISDGRRDSDIRNSKRDGEDDDSQQFT 527
           ANSV++ DGRRD+DIRN K+  ++DD+Q+FT
Sbjct: 302 ANSVQVCDGRRDTDIRNRKKAVDEDDNQEFT 332


>ref|XP_003635008.1| PREDICTED: DNA replication licensing factor MCM6 [Vitis vinifera]
          Length = 812

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/90 (76%), Positives = 81/90 (90%)
 Frame = +3

Query: 255 VIFTGTLVVIPDIMALASPGERAECRRERSQCPKSSGGNEGVRGLRALGVRDLSYRLAFI 434
           VIFTGT+VVIPDI ALASPGERAECRR+  Q   S+ G++GVRGLRALGVRDLSYRLAFI
Sbjct: 239 VIFTGTVVVIPDISALASPGERAECRRDAPQRKNSAVGHDGVRGLRALGVRDLSYRLAFI 298

Query: 435 ANSVKISDGRRDSDIRNSKRDGEDDDSQQF 524
           ANSV+ISDGRR++DIRN K+D ++DD+QQF
Sbjct: 299 ANSVQISDGRREADIRNRKKDADEDDNQQF 328


>emb|CBI29412.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/90 (76%), Positives = 81/90 (90%)
 Frame = +3

Query: 255 VIFTGTLVVIPDIMALASPGERAECRRERSQCPKSSGGNEGVRGLRALGVRDLSYRLAFI 434
           VIFTGT+VVIPDI ALASPGERAECRR+  Q   S+ G++GVRGLRALGVRDLSYRLAFI
Sbjct: 239 VIFTGTVVVIPDISALASPGERAECRRDAPQRKNSAVGHDGVRGLRALGVRDLSYRLAFI 298

Query: 435 ANSVKISDGRRDSDIRNSKRDGEDDDSQQF 524
           ANSV+ISDGRR++DIRN K+D ++DD+QQF
Sbjct: 299 ANSVQISDGRREADIRNRKKDADEDDNQQF 328


>emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera]
          Length = 807

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/90 (76%), Positives = 81/90 (90%)
 Frame = +3

Query: 255 VIFTGTLVVIPDIMALASPGERAECRRERSQCPKSSGGNEGVRGLRALGVRDLSYRLAFI 434
           VIFTGT+VVIPDI ALASPGERAECRR+  Q   S+ G++GVRGLRALGVRDLSYRLAFI
Sbjct: 239 VIFTGTVVVIPDISALASPGERAECRRDAPQRKNSAVGHDGVRGLRALGVRDLSYRLAFI 298

Query: 435 ANSVKISDGRRDSDIRNSKRDGEDDDSQQF 524
           ANSV+ISDGRR++DIRN K+D ++DD+QQF
Sbjct: 299 ANSVQISDGRREADIRNRKKDADEDDNQQF 328


>gb|AAN73052.2| mini-chromosome maintenance protein MCM6 [Pisum sativum]
          Length = 827

 Score =  139 bits (350), Expect = 3e-31
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = +3

Query: 255 VIFTGTLVVIPDIMALASPGERAECRRERSQCPKSSGGNEGVRGLRALGVRDLSYRLAFI 434
           VIFTGT++VIPDI+ALASPGER+ECRRE SQ   SS GNEGVRGLRALGVRDLSYRLAFI
Sbjct: 238 VIFTGTVIVIPDILALASPGERSECRREASQRKGSSSGNEGVRGLRALGVRDLSYRLAFI 297

Query: 435 ANSVKISDGRRDSDIRNSKRDGEDDD 512
           ANSV+I DGRR+ DIRN K+D E+DD
Sbjct: 298 ANSVQICDGRREIDIRNRKKDSEEDD 323


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