BLASTX nr result

ID: Coptis23_contig00016328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016328
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis ...   469   e-130
ref|XP_002526391.1| nucleic acid binding protein, putative [Rici...   447   e-123
ref|XP_003555273.1| PREDICTED: uncharacterized protein LOC100805...   442   e-122
ref|XP_003536627.1| PREDICTED: CWF19-like protein 2-like [Glycin...   438   e-120
gb|AAG50922.1|AC069159_23 unknown protein [Arabidopsis thaliana]      437   e-120

>ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis vinifera]
            gi|297737179|emb|CBI26380.3| unnamed protein product
            [Vitis vinifera]
          Length = 810

 Score =  469 bits (1207), Expect = e-130
 Identities = 231/356 (64%), Positives = 285/356 (80%), Gaps = 4/356 (1%)
 Frame = -2

Query: 1056 DTQLISAAASCLNTFTNDGSFMRDVACQQRRNADGPI---HTDLEGDKQLRSNIMSTDTN 886
            D  LIS A + LN F NDGSFM +V  +Q  +  GP+   + + EGD   +S  +S +TN
Sbjct: 391  DVGLISDAVASLNKFANDGSFMHEVVHRQNIDTGGPLGSSYANCEGDVMSKS--VSLETN 448

Query: 885  KSTGGSPDETGLSANQLAAKAMQLRLKGKHEEAEKLLEQAEFVKMNRESGRNISRHEITG 706
            +   G   +  LSANQLAAKA++LR++GKH+EAE+LL+Q E +K  + +  N       G
Sbjct: 449  QP--GEASKQALSANQLAAKALRLRMEGKHKEAEELLKQTEIIKAKQGTEENTGERS-GG 505

Query: 705  SANRSAVRDLSVRQKKKEEDVDMHLAEKIVQNKQFRISGQADDEYDFDGSPRRKKKQRSG 526
              +R  + D SVR+K+KE+D D+HLA+KI+Q+KQ+ +S +ADDEYDFD +P RK +++ G
Sbjct: 506  GTSRYVMHDSSVRRKRKEDDADLHLAQKIMQSKQYNMSSRADDEYDFDDAPSRKTRKKEG 565

Query: 525  GPEQ-LKSKSNVATHILTQQERCQFCFENPTRPRHLVVAIANFTYLMLPQWQPLVQGHCC 349
            G ++ L  K+N A  ILTQQERCQFCFENPTRPRHLVVAIANF+YLMLPQWQP+V GHCC
Sbjct: 566  GNDRKLTEKNNFANRILTQQERCQFCFENPTRPRHLVVAIANFSYLMLPQWQPVVPGHCC 625

Query: 348  ILPMQHESATRNVDNNVWDEIRNFKKCLIMMFAKQEKEVVFLETVIGLSQQRRHCLVECV 169
            ILPMQHES+TR +DNNVWDEIRNFKKCLIMMFAKQEK++VFLETV+GL+QQRRHCLVEC+
Sbjct: 626  ILPMQHESSTRTLDNNVWDEIRNFKKCLIMMFAKQEKDLVFLETVMGLAQQRRHCLVECI 685

Query: 168  PLPRELAREAPLYFKKAIDEAEEEWSQHNAKKLIDTSVKGLRGSIPKNFPYFHVEF 1
            PLPRE A++APLYFKKAIDEAE+EWSQHNAKKLIDTS KGLRGSIPK+FPYFHVEF
Sbjct: 686  PLPRETAKQAPLYFKKAIDEAEDEWSQHNAKKLIDTSEKGLRGSIPKDFPYFHVEF 741


>ref|XP_002526391.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223534253|gb|EEF35967.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 726

 Score =  447 bits (1150), Expect = e-123
 Identities = 218/354 (61%), Positives = 279/354 (78%), Gaps = 2/354 (0%)
 Frame = -2

Query: 1056 DTQLISAAASCLNTFTNDGSFMRDVACQQRRNADGPIHTDLEGDKQLRSNIMSTDTNK-S 880
            D  +ISAA S +N F +DGSF+ ++   Q   A   + +    D+ + S + S++ N  S
Sbjct: 307  DASIISAAVSGMNKFADDGSFLSNILSWQNDPASS-VSSHKNQDENVESKVTSSEMNSPS 365

Query: 879  TGGSPDETGLSANQLAAKAMQLRLKGKHEEAEKLLEQAEFVKMNRESGRNISRHEITGSA 700
             G +  +  LSANQLAAKA+Q R+KGKHEEA+KL+E+A+ +K+ + +G  +SR +   S 
Sbjct: 366  EGIATAKEALSANQLAAKALQHRIKGKHEEADKLMEEAKNIKVKQGAGEILSRPQKNVST 425

Query: 699  NRSAVRDLSVRQKKKEEDVDMHLAEKIVQNKQFRISGQADDEYDFDGSPRRKKKQRSGGP 520
            NR   ++   R  +KEED D HLA+KI+QNKQ+ +SG+ADDEYDF+  P RK ++++ G 
Sbjct: 426  NRYVAQEFPAR--RKEEDADRHLAQKIIQNKQYSLSGRADDEYDFEDGPSRKSRKKTIGN 483

Query: 519  EQLKSKSNV-ATHILTQQERCQFCFENPTRPRHLVVAIANFTYLMLPQWQPLVQGHCCIL 343
            +Q  ++ N+    ILTQQERC FCFENP RP+HLVV+IANF+YLMLPQWQ +V GHCCIL
Sbjct: 484  DQKSTEKNILGKRILTQQERCLFCFENPNRPKHLVVSIANFSYLMLPQWQSVVPGHCCIL 543

Query: 342  PMQHESATRNVDNNVWDEIRNFKKCLIMMFAKQEKEVVFLETVIGLSQQRRHCLVECVPL 163
            PMQH+S+TR VDNNVW+EIRNFKKCLIMMFAKQEK++VFLETV+GL+QQRRHCL+ECVPL
Sbjct: 544  PMQHDSSTRTVDNNVWEEIRNFKKCLIMMFAKQEKDLVFLETVMGLAQQRRHCLIECVPL 603

Query: 162  PRELAREAPLYFKKAIDEAEEEWSQHNAKKLIDTSVKGLRGSIPKNFPYFHVEF 1
            PRE+A++APLYFKKAIDEAE+EWSQHNAKKLIDTS KGLRGSIPK+FPYFHVEF
Sbjct: 604  PREIAKQAPLYFKKAIDEAEDEWSQHNAKKLIDTSQKGLRGSIPKDFPYFHVEF 657


>ref|XP_003555273.1| PREDICTED: uncharacterized protein LOC100805594 [Glycine max]
          Length = 806

 Score =  442 bits (1138), Expect = e-122
 Identities = 220/350 (62%), Positives = 266/350 (76%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1047 LISAAASCLNTFTNDGSFMRDVACQQRRNADGPIHTDLEGDKQLRSNIMSTDTNKSTGGS 868
            +ISAA S LN F NDGSFM D   +   N+DG +    E +K      +S + N+    S
Sbjct: 392  VISAAVSSLNKFANDGSFMHDFGSKMSNNSDGSVLDSSELEK------VSLEANRPEESS 445

Query: 867  PD-ETGLSANQLAAKAMQLRLKGKHEEAEKLLEQAEFVKMNRESGRNISRHEITGSANRS 691
               +  +S NQLAAK MQLRLKGKHEEA+KL+++A+ +   + +  +  R    GS++R 
Sbjct: 446  AVVKNEMSENQLAAKVMQLRLKGKHEEADKLMQEAKVMNTKQGNQDHSIRSRTEGSSSRY 505

Query: 690  AVRDLSVRQKKKEEDVDMHLAEKIVQNKQFRISGQADDEYDFDGSPRRKKKQRSGGPEQL 511
            A++ +S  QKK E+D DMHLA KI+ NKQFR S QADDEYDF+  P RK +++ GG +  
Sbjct: 506  AMQKISAEQKKGEDDADMHLARKIMHNKQFRASTQADDEYDFEDGPSRKSRKKQGGDDH- 564

Query: 510  KSKSNVATHILTQQERCQFCFENPTRPRHLVVAIANFTYLMLPQWQPLVQGHCCILPMQH 331
            KS        LTQQERC FC ENP RP HLVV+IANFTYLMLP+WQP+V GHCCILP+QH
Sbjct: 565  KSIQKKTNRFLTQQERCLFCLENPNRPMHLVVSIANFTYLMLPKWQPVVPGHCCILPIQH 624

Query: 330  ESATRNVDNNVWDEIRNFKKCLIMMFAKQEKEVVFLETVIGLSQQRRHCLVECVPLPREL 151
            ESATR VD+NVW EIRNFKKCLIMMFAKQEKEVVFLETV+GL+QQRRHC+VEC+PLP+++
Sbjct: 625  ESATRTVDDNVWTEIRNFKKCLIMMFAKQEKEVVFLETVMGLAQQRRHCMVECIPLPQDI 684

Query: 150  AREAPLYFKKAIDEAEEEWSQHNAKKLIDTSVKGLRGSIPKNFPYFHVEF 1
            A+EAPLYFKKAIDEAE+EWSQHNAKKLIDTS KGLR SIPK+FPYFHVEF
Sbjct: 685  AKEAPLYFKKAIDEAEDEWSQHNAKKLIDTSQKGLRNSIPKHFPYFHVEF 734


>ref|XP_003536627.1| PREDICTED: CWF19-like protein 2-like [Glycine max]
          Length = 786

 Score =  438 bits (1126), Expect = e-120
 Identities = 221/352 (62%), Positives = 266/352 (75%), Gaps = 3/352 (0%)
 Frame = -2

Query: 1047 LISAAASCLNTFTNDGSFMRDVACQQRRNADGPIHTDLEGDKQLRSNIMSTDTNKSTGGS 868
            +ISAA S LN F NDG+FM D   +   N+DG +    E +K      +S + N  T G 
Sbjct: 373  VISAAVSSLNKFANDGNFMHDFGSKMSNNSDGSVLESSELEK------VSLEAN--TPGE 424

Query: 867  PD---ETGLSANQLAAKAMQLRLKGKHEEAEKLLEQAEFVKMNRESGRNISRHEITGSAN 697
                 +  +S NQLAAK MQLRLKGKHEEA+KL+++A+ +   + +  +  R    GS++
Sbjct: 425  RSVVVKNEMSENQLAAKVMQLRLKGKHEEADKLMQEAKVMNTKQGNQDHSIRSGTEGSSS 484

Query: 696  RSAVRDLSVRQKKKEEDVDMHLAEKIVQNKQFRISGQADDEYDFDGSPRRKKKQRSGGPE 517
            R A++ +S  QKK E+D DMHLA KI+QNKQFR S QADDEYDF+  P RK +++ GG +
Sbjct: 485  RYAMQKISSEQKKGEDDGDMHLAHKIMQNKQFRASTQADDEYDFEDGPSRKSRKKQGGDD 544

Query: 516  QLKSKSNVATHILTQQERCQFCFENPTRPRHLVVAIANFTYLMLPQWQPLVQGHCCILPM 337
              KS        LTQQERC FC ENP RP HLVV+IANFTYLMLP+WQP+V GHCCILP+
Sbjct: 545  H-KSIQKKTNRFLTQQERCLFCLENPNRPMHLVVSIANFTYLMLPKWQPVVPGHCCILPI 603

Query: 336  QHESATRNVDNNVWDEIRNFKKCLIMMFAKQEKEVVFLETVIGLSQQRRHCLVECVPLPR 157
            QHESATR VD+NVW EIRNFKKCLIMMFAKQEKEVVFLETV+GL+QQRRHC+VEC+PLP 
Sbjct: 604  QHESATRTVDDNVWTEIRNFKKCLIMMFAKQEKEVVFLETVMGLAQQRRHCMVECIPLPE 663

Query: 156  ELAREAPLYFKKAIDEAEEEWSQHNAKKLIDTSVKGLRGSIPKNFPYFHVEF 1
            ++A+EAPLYFKKAIDEAE+EWSQHNAKKLIDTS KGLR SIPK+FPYFHVEF
Sbjct: 664  DIAKEAPLYFKKAIDEAEDEWSQHNAKKLIDTSQKGLRNSIPKHFPYFHVEF 715


>gb|AAG50922.1|AC069159_23 unknown protein [Arabidopsis thaliana]
          Length = 807

 Score =  437 bits (1125), Expect = e-120
 Identities = 215/355 (60%), Positives = 277/355 (78%), Gaps = 3/355 (0%)
 Frame = -2

Query: 1056 DTQLISAAASCLNTFTNDGSFMRDVACQQRRNADGPIHTDLEGDKQLRSNIMSTDTNKST 877
            D++LIS AA+ +N F+NDG+FM+++  +Q+  +  P+ T  +    +    + ++TNK  
Sbjct: 386  DSKLISEAAAHMNKFSNDGNFMKEMLSKQKNVSVSPVETRGDHRSDVEQEALPSETNKDD 445

Query: 876  GGS-PDETGLSANQLAAKAMQLRLKGKHEEAEKLLEQAEFVKMNRESGRNISR-HEITGS 703
             G+ P    LS N+LAAKA+QLR+KGKHEEA+K++E+AE +K  +  G + S+ H    +
Sbjct: 446  EGTLPSMENLSVNKLAAKALQLRMKGKHEEAQKIMEEAERLKAKQAVGDDSSKDHHSIRT 505

Query: 702  ANRSAVRDLSVRQKKKEEDVDMHLAEKIVQNKQFRISGQA-DDEYDFDGSPRRKKKQRSG 526
            A R  V+D+S R +K E+D DMHLA+ I+QNKQ++ S QA DDEY++  +P +K ++R  
Sbjct: 506  AVRYPVKDMSGR-RKNEDDTDMHLAKSIMQNKQYKTSNQAADDEYEYGDAPSKKSRKRES 564

Query: 525  GPEQLKSKSNVATHILTQQERCQFCFENPTRPRHLVVAIANFTYLMLPQWQPLVQGHCCI 346
                +  K N    I+TQQERC FCFENP RP+HLVV+IANFTYLMLPQ QPLVQGHCCI
Sbjct: 565  S-SNIPEKDNRVKRIMTQQERCLFCFENPKRPKHLVVSIANFTYLMLPQHQPLVQGHCCI 623

Query: 345  LPMQHESATRNVDNNVWDEIRNFKKCLIMMFAKQEKEVVFLETVIGLSQQRRHCLVECVP 166
            LPMQHE+A+R+VD+NVWDEIRNFKKCLIMM+AK+ K+ VFLETVIGLSQQRRHCL+EC+P
Sbjct: 624  LPMQHEAASRSVDDNVWDEIRNFKKCLIMMYAKEGKDAVFLETVIGLSQQRRHCLIECIP 683

Query: 165  LPRELAREAPLYFKKAIDEAEEEWSQHNAKKLIDTSVKGLRGSIPKNFPYFHVEF 1
            +P+E+A+E PLYFKKAIDEAE EWSQHNAKKLIDTSVKGLR SIPKNFPYFHVEF
Sbjct: 684  IPQEIAKEGPLYFKKAIDEAESEWSQHNAKKLIDTSVKGLRNSIPKNFPYFHVEF 738


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