BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016306
         (1613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   367   5e-99
emb|CBI19367.3| unnamed protein product [Vitis vinifera]              367   5e-99
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...   338   2e-90
ref|XP_002522113.1| protein binding protein, putative [Ricinus c...   330   9e-88
ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2...   329   1e-87

>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score =  367 bits (942), Expect = 5e-99
 Identities = 207/419 (49%), Positives = 248/419 (59%), Gaps = 6/419 (1%)
 Frame = -2

Query: 1612 AVERVRDREDLFESYXXXXXXXXXXXXXXXXKRNIREYKQFLQSCDFIKANSQWRKVQDR 1433
            AVER RDREDLFE++                KRN  EY+QFL+SCDFIK NSQWRKVQDR
Sbjct: 565  AVERSRDREDLFENFIMELQKKERTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDR 624

Query: 1432 LEEDERCSRLEKLDRLEIFQEYINXXXXXXXXXXXXXXXXXXRTERNNRDEFRKLMEGHV 1253
            LE+DERCSRLEK+DRLEIFQEYI                   R ER NRDEFRKLME HV
Sbjct: 625  LEDDERCSRLEKIDRLEIFQEYIRDLEREEEEQRKIQKEQLRRAERKNRDEFRKLMEEHV 684

Query: 1252 GDGTLTAKTHWREYHEKVKDSPQYVAASSNTSGATPKVLFEDVTEDLQKQYHDDKARIKE 1073
              GTLTAKTHWR+Y  KVKDS  Y+A +SNTSG+TPK LFEDV E+L+KQYH+DKARIK+
Sbjct: 685  AAGTLTAKTHWRDYCMKVKDSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKD 744

Query: 1072 AIKLRKITMTSTWTLEDLKTAIAEELSSSSVSDINLELVFNXXXXXXXXXXXXXXXXRQN 893
            A+KL K+T+ STWT  D K AI +++ S ++SD+NL+LVF                 RQ 
Sbjct: 745  AMKLSKVTIASTWTFGDFKAAILDDVGSPNISDVNLKLVFEELLDRIKEKEEKEAKKRQR 804

Query: 892  LADNFSHLLSSVKEINSTSTWDDCKPLFEDSQEYRSMVEESFKKDVFEEYITHLQXXXXX 713
            LAD+F+ LL S KEI ++S W+DCKPLFE+SQEYRS+ EESF +++FEEYI HLQ     
Sbjct: 805  LADDFNDLLRSKKEITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHLQEKAKE 864

Query: 712  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKKVET------VSGNAX 551
                                                     RS+K ET      V+G+  
Sbjct: 865  KERKREEEKAKKEKEREEKEKRKEKERKEKDRDREREKGKERSRKDETESENVDVTGSYG 924

Query: 550  XXXXXXXXXXXXXXXXXXRQNEGDDISSGREEKEDIKKSHRHKSDGKKSRKHVNSNESD 374
                               Q+  DD SS +EEKE+ KKS RH SD KKSRKH  + ESD
Sbjct: 925  YKEDKKREKDKDRKHRKRHQSAVDDASSDKEEKEESKKSRRHGSDRKKSRKHAYTPESD 983


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  367 bits (942), Expect = 5e-99
 Identities = 207/419 (49%), Positives = 248/419 (59%), Gaps = 6/419 (1%)
 Frame = -2

Query: 1612 AVERVRDREDLFESYXXXXXXXXXXXXXXXXKRNIREYKQFLQSCDFIKANSQWRKVQDR 1433
            AVER RDREDLFE++                KRN  EY+QFL+SCDFIK NSQWRKVQDR
Sbjct: 575  AVERSRDREDLFENFIMELQKKERTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDR 634

Query: 1432 LEEDERCSRLEKLDRLEIFQEYINXXXXXXXXXXXXXXXXXXRTERNNRDEFRKLMEGHV 1253
            LE+DERCSRLEK+DRLEIFQEYI                   R ER NRDEFRKLME HV
Sbjct: 635  LEDDERCSRLEKIDRLEIFQEYIRDLEREEEEQRKIQKEQLRRAERKNRDEFRKLMEEHV 694

Query: 1252 GDGTLTAKTHWREYHEKVKDSPQYVAASSNTSGATPKVLFEDVTEDLQKQYHDDKARIKE 1073
              GTLTAKTHWR+Y  KVKDS  Y+A +SNTSG+TPK LFEDV E+L+KQYH+DKARIK+
Sbjct: 695  AAGTLTAKTHWRDYCMKVKDSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKD 754

Query: 1072 AIKLRKITMTSTWTLEDLKTAIAEELSSSSVSDINLELVFNXXXXXXXXXXXXXXXXRQN 893
            A+KL K+T+ STWT  D K AI +++ S ++SD+NL+LVF                 RQ 
Sbjct: 755  AMKLSKVTIASTWTFGDFKAAILDDVGSPNISDVNLKLVFEELLDRIKEKEEKEAKKRQR 814

Query: 892  LADNFSHLLSSVKEINSTSTWDDCKPLFEDSQEYRSMVEESFKKDVFEEYITHLQXXXXX 713
            LAD+F+ LL S KEI ++S W+DCKPLFE+SQEYRS+ EESF +++FEEYI HLQ     
Sbjct: 815  LADDFNDLLRSKKEITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHLQEKAKE 874

Query: 712  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKKVET------VSGNAX 551
                                                     RS+K ET      V+G+  
Sbjct: 875  KERKREEEKAKKEKEREEKEKRKEKERKEKDRDREREKGKERSRKDETESENVDVTGSYG 934

Query: 550  XXXXXXXXXXXXXXXXXXRQNEGDDISSGREEKEDIKKSHRHKSDGKKSRKHVNSNESD 374
                               Q+  DD SS +EEKE+ KKS RH SD KKSRKH  + ESD
Sbjct: 935  YKEDKKREKDKDRKHRKRHQSAVDDASSDKEEKEESKKSRRHGSDRKKSRKHAYTPESD 993


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
            gi|223550756|gb|EEF52242.1| protein binding protein,
            putative [Ricinus communis]
          Length = 970

 Score =  338 bits (868), Expect = 2e-90
 Identities = 191/419 (45%), Positives = 242/419 (57%), Gaps = 6/419 (1%)
 Frame = -2

Query: 1612 AVERVRDREDLFESYXXXXXXXXXXXXXXXXKRNIREYKQFLQSCDFIKANSQWRKVQDR 1433
            AVE+ RDREDLF++Y                +RN+ E+K+FL+SCDFIK NSQWRKVQDR
Sbjct: 515  AVEKARDREDLFDNYIVELERKEREKAAEDHRRNVTEFKKFLESCDFIKVNSQWRKVQDR 574

Query: 1432 LEEDERCSRLEKLDRLEIFQEYINXXXXXXXXXXXXXXXXXXRTERNNRDEFRKLMEGHV 1253
            LE+DERC RLEKLDRL +FQ+YI                   R ER NRD FRKL+E HV
Sbjct: 575  LEDDERCLRLEKLDRLLVFQDYIRDLEKEEEEQKKIQKEQLRRAERKNRDGFRKLLEEHV 634

Query: 1252 GDGTLTAKTHWREYHEKVKDSPQYVAASSNTSGATPKVLFEDVTEDLQKQYHDDKARIKE 1073
             DG+LTAK HW +Y  KVKD PQY A ++NTSG+TPK LFEDV E+L+KQY DDKAR+K+
Sbjct: 635  ADGSLTAKAHWLDYCLKVKDLPQYHAVATNTSGSTPKDLFEDVAEELEKQYRDDKARVKD 694

Query: 1072 AIKLRKITMTSTWTLEDLKTAIAEELSSSSVSDINLELVFNXXXXXXXXXXXXXXXXRQN 893
            AIK  KI MTSTW  ED K AI +++SS  VSDINL+L+++                RQ 
Sbjct: 695  AIKSGKIIMTSTWIFEDFKAAILDDVSSPPVSDINLQLIYDELLERAKEKEEKEAKKRQR 754

Query: 892  LADNFSHLLSSVKEINSTSTWDDCKPLFEDSQEYRSMVEESFKKDVFEEYITHLQXXXXX 713
            LAD+ + LL + KEI ++S+W+DC+PLFE+SQEYR++ EES  K++FEEYI HLQ     
Sbjct: 755  LADDLTKLLHTYKEIMASSSWEDCRPLFEESQEYRAIGEESVIKEIFEEYIAHLQEKAKE 814

Query: 712  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKKVETVSGNAXXXXXXX 533
                                                     R KK ET S N        
Sbjct: 815  KERKREEEKVKKEKEREEKEKRKERERKEKEKEREREKAKERIKKDETDSENVDTTDSYG 874

Query: 532  XXXXXXXXXXXXRQNE------GDDISSGREEKEDIKKSHRHKSDGKKSRKHVNSNESD 374
                        R++        D++SS ++EKE+ +KS +H SD KKSRKH  + ESD
Sbjct: 875  HKEDKKREKDKDRKHRKRHHSGTDEVSSDKDEKEESRKSRKHSSDRKKSRKHSYTPESD 933


>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
            gi|223538712|gb|EEF40313.1| protein binding protein,
            putative [Ricinus communis]
          Length = 956

 Score =  330 bits (845), Expect = 9e-88
 Identities = 180/415 (43%), Positives = 239/415 (57%), Gaps = 2/415 (0%)
 Frame = -2

Query: 1612 AVERVRDREDLFESYXXXXXXXXXXXXXXXXKRNIREYKQFLQSCDFIKANSQWRKVQDR 1433
            AVER RDR D+F+S+                KRNI EY+QFL+SCDFIKA++QWRKVQDR
Sbjct: 505  AVERERDRRDIFDSFLQELGDKERAKAQEERKRNIMEYRQFLESCDFIKASTQWRKVQDR 564

Query: 1432 LEEDERCSRLEKLDRLEIFQEYINXXXXXXXXXXXXXXXXXXRTERNNRDEFRKLMEGHV 1253
            LE DERCSRLEK+DRLEIFQ+Y+                   + ER NRDEFRKL+E HV
Sbjct: 565  LEADERCSRLEKIDRLEIFQDYLRDLEKEEEEQRKIQKEEQRKAERKNRDEFRKLLEEHV 624

Query: 1252 GDGTLTAKTHWREYHEKVKDSPQYVAASSNTSGATPKVLFEDVTEDLQKQYHDDKARIKE 1073
              GT+TAKTHWR+Y+ KVKD P Y+A +SNTSG+TPK LFEDV E+L+KQYH+DK+RIK+
Sbjct: 625  AAGTMTAKTHWRDYYLKVKDLPAYLAVASNTSGSTPKDLFEDVLEELEKQYHEDKSRIKD 684

Query: 1072 AIKLRKITMTSTWTLEDLKTAIAEELSSSSVSDINLELVFNXXXXXXXXXXXXXXXXRQN 893
            A+KL+K+ M STWTL+DLK AI E++SS S+SD+NL++VF+                R+ 
Sbjct: 685  AVKLKKVAMASTWTLDDLKAAIVEDISSPSISDMNLKIVFDELLERAKEKEEKDAKKRKR 744

Query: 892  LADNFSHLLSSVKEINSTSTWDDCKPLFEDSQEYRSMVEESFKKDVFEEYITHLQXXXXX 713
            LAD+F +LL S K+I ++S W+ CK LFE S+E+ S+ EES  +D+FEEYI  L+     
Sbjct: 745  LADDFLNLLHSTKDITASSKWESCKELFEGSREFSSINEESICQDIFEEYIAQLKEHAKE 804

Query: 712  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKKVETVSGNAXXXXXXX 533
                                                     + ++ +T S +        
Sbjct: 805  NERKRKEEKAKKEKEREEKDRRKAKHRRDKDRGHEREKEHMKKEEADTGSADTTDDHFNN 864

Query: 532  XXXXXXXXXXXXRQNEGDDISSGREE--KEDIKKSHRHKSDGKKSRKHVNSNESD 374
                        ++    D      E  K+  K SHRH SD KKS+ H ++ +SD
Sbjct: 865  DNKRSVNDSNKKQRKRHHDAEDDLNESEKDRSKSSHRHSSDHKKSKWHASTPDSD 919


>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
            predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  329 bits (843), Expect = 1e-87
 Identities = 163/295 (55%), Positives = 206/295 (69%)
 Frame = -2

Query: 1612 AVERVRDREDLFESYXXXXXXXXXXXXXXXXKRNIREYKQFLQSCDFIKANSQWRKVQDR 1433
            A+ER RDREDLF+SY                +RN+ EY++FL+SCDFIKA+SQWRK+QDR
Sbjct: 550  ALERARDREDLFDSYIVDLERKEKEKAAEDRRRNVAEYRKFLESCDFIKASSQWRKIQDR 609

Query: 1432 LEEDERCSRLEKLDRLEIFQEYINXXXXXXXXXXXXXXXXXXRTERNNRDEFRKLMEGHV 1253
            LE+DERC  LEKLDRL IFQ+YI                   R ER NRDEFRKL+E HV
Sbjct: 610  LEDDERCLCLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRAERKNRDEFRKLLEEHV 669

Query: 1252 GDGTLTAKTHWREYHEKVKDSPQYVAASSNTSGATPKVLFEDVTEDLQKQYHDDKARIKE 1073
              G+LTAKTHW +Y  KVKD P Y A ++NTSG+ PK LFEDV+E+L+KQYHDDK RIK+
Sbjct: 670  ASGSLTAKTHWLDYCLKVKDLPPYQAVATNTSGSKPKDLFEDVSEELEKQYHDDKTRIKD 729

Query: 1072 AIKLRKITMTSTWTLEDLKTAIAEELSSSSVSDINLELVFNXXXXXXXXXXXXXXXXRQN 893
            A+KL KITM STWT ED K A+A+++ S  +SDINL+L++                 +Q 
Sbjct: 730  AMKLGKITMVSTWTFEDFKGAVADDIGSPPISDINLKLLYEELVERAKEKEEKEAKKQQR 789

Query: 892  LADNFSHLLSSVKEINSTSTWDDCKPLFEDSQEYRSMVEESFKKDVFEEYITHLQ 728
            LAD+F+ LL ++KE+  +S W+DCKPLFE+SQEYRS+ EES  K++FEEY+THLQ
Sbjct: 790  LADDFTKLLYTLKEVTPSSNWEDCKPLFEESQEYRSIGEESLSKEIFEEYVTHLQ 844