BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016305
         (1524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303222.1| predicted protein [Populus trichocarpa] gi|2...   605   e-170
ref|XP_002519926.1| pentatricopeptide repeat-containing protein,...   592   e-166
ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containi...   570   e-160
ref|XP_003629008.1| Pentatricopeptide repeat-containing protein ...   550   e-154
ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containi...   534   e-149

>ref|XP_002303222.1| predicted protein [Populus trichocarpa] gi|222840654|gb|EEE78201.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  605 bits (1559), Expect = e-170
 Identities = 287/421 (68%), Positives = 352/421 (83%)
 Frame = -1

Query: 1263 MNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFPAAAVKFFKWTGSL 1084
            ++P  R+L +I+    + +IE+AL+  G+ P  +   EVLK  +E   +A+ FF+W G  
Sbjct: 26   ISPSARLLFEIITRPSSHDIESALSSTGIPPTHDIVHEVLKLCHENATSAIAFFRWAGRT 85

Query: 1083 NRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFGSYCIAGKFSEAVM 904
            ++ T Y+WNLMVDLLGKN ++E MWDA+R+MKQE++LSMATF SVFGSYC+AGKF+EA+M
Sbjct: 86   HKLTSYAWNLMVDLLGKNWMYEPMWDAVRTMKQEDMLSMATFVSVFGSYCMAGKFNEAIM 145

Query: 903  SFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKIKMKITPDADTFAILLEGWE 724
            SF V+D+YG+QQDV+ VNSLL+AIC EENQT KALEFF+KIK+KI P+ADTFAILLEGWE
Sbjct: 146  SFYVMDKYGVQQDVVVVNSLLTAICHEENQTAKALEFFDKIKLKIPPNADTFAILLEGWE 205

Query: 723  KEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQADEAIKFLHVMKGKNCLPG 544
            KEG+ AKAK TFGEMVI+VGWSP+NMSAYD+FLTTLVRG+QADEA+KFL VMKGKNCLPG
Sbjct: 206  KEGDVAKAKTTFGEMVIKVGWSPENMSAYDSFLTTLVRGSQADEAVKFLRVMKGKNCLPG 265

Query: 543  MKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAMIGLLCNNSDFDNALRLLD 364
            +KFFSNALD+LVKQNDS+ A+PLW+IMVGSGLLP+LIMYNAMIGL CNN+D DNA RLLD
Sbjct: 266  LKFFSNALDMLVKQNDSTHAIPLWDIMVGSGLLPNLIMYNAMIGLHCNNNDVDNAFRLLD 325

Query: 363  EMAFHGAFPDSLTYNMIFQCLIKNKKVRQAASFFNEMMKNEQPPTHANCAAAIKMFFDAD 184
            EM F+GAFPD LT+N+IF+CLIKNKKV +   FF EM+KNE PPTH +C+AAI    D  
Sbjct: 326  EMVFNGAFPDFLTFNIIFRCLIKNKKVHRVGKFFYEMIKNESPPTHFDCSAAIMTLIDGG 385

Query: 183  DPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRKFFDDMLDRRINIYESTMK 4
            DPE A+E+W  ++ N V P D S+N LLIG C LGR+S+VR+F +DMLDRRINIYESTMK
Sbjct: 386  DPEMAIEIWNYIVENHVLPLDGSANALLIGFCNLGRMSQVRRFAEDMLDRRINIYESTMK 445

Query: 3    K 1
            K
Sbjct: 446  K 446


>ref|XP_002519926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540972|gb|EEF42530.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 481

 Score =  592 bits (1525), Expect = e-166
 Identities = 286/433 (66%), Positives = 348/433 (80%)
 Frame = -1

Query: 1299 ANHPSYIEATPTMNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFPA 1120
            + H + ++    ++   R L DI+  V   ++E+AL+  G++   +   EVLK SY  PA
Sbjct: 23   STHSNGVDIDIDISQSARTLSDILTRVSPHDMESALSSTGINLTCDIIHEVLKLSYSNPA 82

Query: 1119 AAVKFFKWTGSLNRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFGS 940
            +AV+FF+W G    HT YSWNLMVDLLGKN LFE MWDAIRSMKQENVLSMATFASVFGS
Sbjct: 83   SAVEFFRWAGRSGTHTPYSWNLMVDLLGKNQLFEAMWDAIRSMKQENVLSMATFASVFGS 142

Query: 939  YCIAGKFSEAVMSFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKIKMKITPD 760
            YC AG FSEA+MSFD++D+YGIQQDVIAVNSLLSAIC E+NQT KA+EFF++IK+KI PD
Sbjct: 143  YCKAGSFSEAIMSFDIMDKYGIQQDVIAVNSLLSAICNEDNQTIKAVEFFDRIKLKIPPD 202

Query: 759  ADTFAILLEGWEKEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQADEAIKF 580
             DT+AILLEGWEKEGNAAKAKN FGEMVI VGWSP+NM AY+AFL  LVR +Q D+A  F
Sbjct: 203  GDTYAILLEGWEKEGNAAKAKNIFGEMVIHVGWSPENMPAYNAFLNLLVRESQTDDAFDF 262

Query: 579  LHVMKGKNCLPGMKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAMIGLLCN 400
            L +MK K CLPG+KF+S+ALD+L+K+ND   AVP+W+IMV +GL+P+L+MYN+MIGLLCN
Sbjct: 263  LRLMKEKGCLPGLKFYSDALDMLLKRNDVLHAVPMWDIMVDTGLMPNLLMYNSMIGLLCN 322

Query: 399  NSDFDNALRLLDEMAFHGAFPDSLTYNMIFQCLIKNKKVRQAASFFNEMMKNEQPPTHAN 220
            N+D DNA RL D+M FHGAFPD LTY MIF+CL+KNKKV QAASFF+EM+KNE PPTH +
Sbjct: 323  NNDIDNAFRLFDDMVFHGAFPDFLTYKMIFRCLVKNKKVSQAASFFHEMIKNENPPTHLD 382

Query: 219  CAAAIKMFFDADDPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRKFFDDML 40
            CAAAI MF   DDPE A+E+W  M+ +   P D+S+N LL+GL  LGRLSEV +F +DML
Sbjct: 383  CAAAITMFMGGDDPEMAIEIWNYMVDDQELPLDESANALLVGLGNLGRLSEVSRFAEDML 442

Query: 39   DRRINIYESTMKK 1
            DRRINI+ESTM K
Sbjct: 443  DRRINIHESTMAK 455


>ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Glycine max]
          Length = 488

 Score =  570 bits (1469), Expect = e-160
 Identities = 272/432 (62%), Positives = 338/432 (78%)
 Frame = -1

Query: 1302 PANHPSYIEATPTMNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFP 1123
            P   PS+++A P ++   R LCDI+      +IE+AL+  G+ P  E   EVL+ SY +P
Sbjct: 27   PNQFPSHLDA-PNVSSTARALCDILTRSSPQDIESALSSSGIVPEEECTNEVLRLSYNYP 85

Query: 1122 AAAVKFFKWTGSLNRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFG 943
            ++AVKFF+W G   +H  ++WNLMVDLLGKN LFE MWDA+RSMKQE  LS++TFASVF 
Sbjct: 86   SSAVKFFRWAGRGKKHPVHTWNLMVDLLGKNQLFEPMWDAVRSMKQEQKLSLSTFASVFQ 145

Query: 942  SYCIAGKFSEAVMSFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKIKMKITP 763
            SYC A +F+EAVMSFDV+DRYG++QDV+AVNSLLSAIC E+NQT   LEFFE IK K+ P
Sbjct: 146  SYCTAARFNEAVMSFDVMDRYGVKQDVVAVNSLLSAICSEDNQTSFGLEFFEGIKAKVPP 205

Query: 762  DADTFAILLEGWEKEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQADEAIK 583
            D DTFAILLEGWEKEGNAAKAK TFG+MV  +GW+  N++AYDAFL TL+R    D+ ++
Sbjct: 206  DGDTFAILLEGWEKEGNAAKAKTTFGDMVAHIGWNKDNVAAYDAFLMTLLRAGLMDDVVR 265

Query: 582  FLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAMIGLLC 403
            FL VMK  +C PG+KFF+ ALD LVKQND+  AVP+W++MV   L+P+LIMYNAMIGLLC
Sbjct: 266  FLQVMKDHDCFPGLKFFTTALDFLVKQNDADHAVPVWDVMVSGELVPNLIMYNAMIGLLC 325

Query: 402  NNSDFDNALRLLDEMAFHGAFPDSLTYNMIFQCLIKNKKVRQAASFFNEMMKNEQPPTHA 223
            NN+  D+A RLLDEMAFHGAFPDSLTYNMIF+CL+KNKK R+   FF EM+KNE PPT +
Sbjct: 326  NNAAVDHAFRLLDEMAFHGAFPDSLTYNMIFECLVKNKKARETERFFAEMVKNEWPPTGS 385

Query: 222  NCAAAIKMFFDADDPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRKFFDDM 43
            NCAAAI M FD DDPE A E+W  ++ N V P D+S+N LLIGLC + R +EV++F +D+
Sbjct: 386  NCAAAIAMLFDCDDPEAAHEIWSYVVENRVKPLDESANALLIGLCNMSRFTEVKRFAEDI 445

Query: 42   LDRRINIYESTM 7
            LDRRINIY+STM
Sbjct: 446  LDRRINIYQSTM 457


>ref|XP_003629008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355523030|gb|AET03484.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  550 bits (1418), Expect = e-154
 Identities = 267/439 (60%), Positives = 340/439 (77%), Gaps = 5/439 (1%)
 Frame = -1

Query: 1302 PANHPSYIEATPTMNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFP 1123
            P   PS+++ TP ++   R LC+++      +I+ AL+  G+ P  E   EVLK SY +P
Sbjct: 38   PNEFPSHLD-TPNVSSTARTLCNLLTRTSPQDIDNALSSSGIHPSEECVHEVLKLSYNYP 96

Query: 1122 AAAVKFFKWTGSLNRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFG 943
            ++A+KFF+W G L +H+ ++WNLMVDLLG+N LFE MWDA+R+MKQE VLS+ TF SVF 
Sbjct: 97   SSAIKFFRWAGRLRKHSAHAWNLMVDLLGRNQLFEPMWDAVRTMKQEGVLSLPTFVSVFQ 156

Query: 942  SYCIAGKFSEAVMSFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKI-----K 778
            SYC+AG+ +EAVMSFDV+D+Y I ++V+AVNSLLSAICREENQT   +EF EK      +
Sbjct: 157  SYCMAGRVNEAVMSFDVMDKYDIDKNVVAVNSLLSAICREENQTSVGVEFLEKKVTGKDE 216

Query: 777  MKITPDADTFAILLEGWEKEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQA 598
             KI  D D++AILLEGWEKEGNA KAK TFGEMVIRVGWS  N++AYDAFL TL+R  Q 
Sbjct: 217  GKIELDGDSYAILLEGWEKEGNATKAKTTFGEMVIRVGWSQDNVAAYDAFLMTLLRALQF 276

Query: 597  DEAIKFLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAM 418
            DE + FL VMK  +C PG+KFF+NALD+LVK+ND++ A+PLW++MV SGLLP+LIMYNAM
Sbjct: 277  DEVVGFLKVMKDHDCFPGLKFFTNALDVLVKRNDAAHAIPLWDVMVVSGLLPNLIMYNAM 336

Query: 417  IGLLCNNSDFDNALRLLDEMAFHGAFPDSLTYNMIFQCLIKNKKVRQAASFFNEMMKNEQ 238
            IGLLCNN + D+A RLLDEM  HGAFPDSLTYNMIF+CL+KNKKVR+   FF EM+KNE 
Sbjct: 337  IGLLCNNDEIDHAFRLLDEMVLHGAFPDSLTYNMIFECLVKNKKVRETERFFAEMIKNEW 396

Query: 237  PPTHANCAAAIKMFFDADDPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRK 58
             PT +NCA AI+M F+ DDP+ A+E+W  M+   V   D S+N +LIGLC L RLSEVR+
Sbjct: 397  LPTTSNCAVAIEMLFNCDDPDAALEIWSYMVETRVRVLDVSANMVLIGLCKLKRLSEVRR 456

Query: 57   FFDDMLDRRINIYESTMKK 1
            F ++MLD+RI+IY+STM K
Sbjct: 457  FAEEMLDKRISIYDSTMNK 475


>ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
            gi|296085476|emb|CBI29208.3| unnamed protein product
            [Vitis vinifera]
          Length = 464

 Score =  534 bits (1376), Expect = e-149
 Identities = 253/421 (60%), Positives = 320/421 (76%)
 Frame = -1

Query: 1263 MNPRVRVLCDIVGTVPAAEIETALARCGVSPLPEYAEEVLKHSYEFPAAAVKFFKWTGSL 1084
            ++P  + L  I+       +  AL+   + P P+  ++VL+ SY   +AAV+FF+W G  
Sbjct: 13   ISPDAKTLLQIISATAPHALVAALSATSIPPTPDVVQDVLRLSYSNSSAAVEFFRWAGLT 72

Query: 1083 NRHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQENVLSMATFASVFGSYCIAGKFSEAVM 904
             +H+ +SWNL+VDLLGKN  FE MWDAIRSM+ E  LS++ F SVFGSYC  G+ +EA+M
Sbjct: 73   RKHSAHSWNLIVDLLGKNSKFEPMWDAIRSMRNEGALSLSAFISVFGSYCSVGRVNEAIM 132

Query: 903  SFDVLDRYGIQQDVIAVNSLLSAICREENQTYKALEFFEKIKMKITPDADTFAILLEGWE 724
            SF+V+DRYGI  DV A+N+LLSAIC E   T  ALEFFEKIK+KITPD DTF ILLEGWE
Sbjct: 133  SFEVMDRYGIPPDVAAMNALLSAICCEGGSTTLALEFFEKIKVKITPDGDTFMILLEGWE 192

Query: 723  KEGNAAKAKNTFGEMVIRVGWSPQNMSAYDAFLTTLVRGAQADEAIKFLHVMKGKNCLPG 544
            +EGN  KAK+TFGEMV+R+GWSPQNM AY++ L TLVRG + +EAIKFL VMKGK CLPG
Sbjct: 193  REGNVTKAKSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVEEAIKFLLVMKGKGCLPG 252

Query: 543  MKFFSNALDILVKQNDSSQAVPLWEIMVGSGLLPSLIMYNAMIGLLCNNSDFDNALRLLD 364
            +KFFSNALD+L+KQNDS+ A+ LW+IM+  G +P+L+MYN +IG+LCN  D DNA R LD
Sbjct: 253  LKFFSNALDVLLKQNDSTHAIALWDIMLDGGFMPNLMMYNTIIGILCNAGDADNAFRFLD 312

Query: 363  EMAFHGAFPDSLTYNMIFQCLIKNKKVRQAASFFNEMMKNEQPPTHANCAAAIKMFFDAD 184
            EM F+G F DS TYNMIFQCL+K+KKV +A  FF EM+KNE PP  +NCAAAI M FD D
Sbjct: 313  EMVFYGVFADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECPPMPSNCAAAIAMCFDGD 372

Query: 183  DPETAVEVWVSMMINLVYPADDSSNELLIGLCGLGRLSEVRKFFDDMLDRRINIYESTMK 4
            DPE A+E+W  M+ N + P D+S+N LLIGLC L R S+ R+F +DMLD +I I+ESTM+
Sbjct: 373  DPEMAIEIWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRFAEDMLDMKIKIHESTME 432

Query: 3    K 1
            K
Sbjct: 433  K 433