BLASTX nr result

ID: Coptis23_contig00016292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016292
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61652.1| hypothetical protein VITISV_006012 [Vitis vinifera]    97   1e-18
ref|XP_002275842.2| PREDICTED: LOW QUALITY PROTEIN: polyphenol o...    96   4e-18
gb|AFJ42577.1| polyphenol oxidase [Sesamum indicum]                    94   9e-18
gb|ADP89908.1| polyphenol oxidase [Nelumbo nucifera]                   93   2e-17
ref|XP_002316632.1| polyphenol oxidase [Populus trichocarpa] gi|...    93   2e-17

>emb|CAN61652.1| hypothetical protein VITISV_006012 [Vitis vinifera]
          Length = 601

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   PVSPPDLSKCQLATDSANGERVNCCPPYTTANVVDF-IPPRKEFLRQRKAAHKLSHDEIR 178
           P+SPPDLS+C  A   A  +  NCCPP  ++ ++DF +PP+   LR R AAH  S + I 
Sbjct: 99  PISPPDLSECGAADLPAGAQPTNCCPP-VSSKIIDFKLPPKNSPLRIRPAAHLASKEYIA 157

Query: 179 KFQTAIQKLKELPADDPWNYMQQATVHCTYCN 274
           K++ AI+ +K LP DDP ++MQQA VHC YCN
Sbjct: 158 KYKKAIELMKALPDDDPRSFMQQADVHCAYCN 189


>ref|XP_002275842.2| PREDICTED: LOW QUALITY PROTEIN: polyphenol oxidase,
           chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 569

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   PVSPPDLSKCQLATDSANGERVNCCPPYTTANVVDF-IPPRKEFLRQRKAAHKLSHDEIR 178
           P+SPPDLS+C  A   A  +  NCCPP  ++ ++DF +PP+    R R AAH  S + I 
Sbjct: 99  PISPPDLSECGAADLPAGAQPTNCCPP-VSSKIIDFKLPPKNSPFRIRPAAHLASKEYIA 157

Query: 179 KFQTAIQKLKELPADDPWNYMQQATVHCTYCN 274
           K++ AI+ +K LP DDP ++MQQA VHC YCN
Sbjct: 158 KYKKAIELMKALPDDDPRSFMQQADVHCAYCN 189


>gb|AFJ42577.1| polyphenol oxidase [Sesamum indicum]
          Length = 584

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = +2

Query: 2   PVSPPDLSKCQLATDSANGER--VNCCPPYTTANVVDFIPPRKEFLRQRKAAHKLSHDEI 175
           PV PP+L KC  AT+   GE+  +NCCPP T   ++D+  P    L+ R +AH++S + I
Sbjct: 93  PVQPPELDKCGTATNLNTGEQLDINCCPPVTD-RILDYRLPPVYQLKVRPSAHRVSPEYI 151

Query: 176 RKFQTAIQKLKELPADDPWNYMQQATVHCTYCN 274
            K+  AI  +K LPADDP N+MQQA +HC YCN
Sbjct: 152 AKYNKAIDLMKRLPADDPRNFMQQAMIHCAYCN 184


>gb|ADP89908.1| polyphenol oxidase [Nelumbo nucifera]
          Length = 500

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   PVSPPDLSKCQLATDSANGERVNCCPPYTTANVVDF-IPPRKEFLRQRKAAHKLSHDEIR 178
           P+ PPDLSKC  A   A  +  NCCPP  ++ +VDF +P   E +R R AAH +  + I 
Sbjct: 47  PIMPPDLSKCGAANLPAGAKPTNCCPP-ASSEIVDFKLPSSSEPMRVRPAAHMVDEEYIA 105

Query: 179 KFQTAIQKLKELPADDPWNYMQQATVHCTYCN 274
           K+  AI  +K LPADDP N+ QQA VHC YC+
Sbjct: 106 KYSKAIALMKALPADDPRNFTQQANVHCAYCD 137


>ref|XP_002316632.1| polyphenol oxidase [Populus trichocarpa]
           gi|222859697|gb|EEE97244.1| polyphenol oxidase [Populus
           trichocarpa]
          Length = 590

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   PVSPPDLSKCQLATDSANGERVNCCPPYTTANVVDFI-PPRKEFLRQRKAAHKLSHDEIR 178
           PVS PD+SKC  A         NCCPP  +  ++DF  PP    LR R AAH    D I 
Sbjct: 83  PVSAPDISKCGRADLPTGANETNCCPPVPSTKILDFKRPPSNAPLRVRPAAHLADKDYIA 142

Query: 179 KFQTAIQKLKELPADDPWNYMQQATVHCTYCN 274
           K++ AI+ +K LP DDP ++MQQA VHC YCN
Sbjct: 143 KYKKAIELMKALPEDDPRSFMQQADVHCAYCN 174


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