BLASTX nr result

ID: Coptis23_contig00016287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016287
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519206.1| PREDICTED: uncharacterized protein LOC100815...    82   6e-14
ref|XP_002285628.1| PREDICTED: uncharacterized protein LOC100243...    82   6e-14
gb|ACU19406.1| unknown [Glycine max]                                   81   8e-14
ref|NP_565890.1| uncharacterized protein [Arabidopsis thaliana] ...    73   2e-11
ref|XP_002881598.1| hypothetical protein ARALYDRAFT_482856 [Arab...    73   3e-11

>ref|XP_003519206.1| PREDICTED: uncharacterized protein LOC100815148 [Glycine max]
          Length = 90

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/91 (49%), Positives = 60/91 (65%)
 Frame = -3

Query: 429 LNKVSSPSPTTNSRNEENTQELSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTA 250
           +  + S S TT S +++     +S +SR+RK CL +A SLQ+GFR+VKA FVGQ K +TA
Sbjct: 1   MGDMDSSSSTTLSNHKK-----TSSVSRLRKGCLSFAASLQKGFRYVKAFFVGQVKTITA 55

Query: 249 KNEKEASEADLQTAKMQVXXXXXXXXTKKRL 157
           +NEKEASEA+L+  KMQV         K RL
Sbjct: 56  RNEKEASEAELEATKMQVEATDAAEDIKNRL 86


>ref|XP_002285628.1| PREDICTED: uncharacterized protein LOC100243668 [Vitis vinifera]
           gi|302142094|emb|CBI19297.3| unnamed protein product
           [Vitis vinifera]
          Length = 87

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/83 (51%), Positives = 57/83 (68%)
 Frame = -3

Query: 405 PTTNSRNEENTQELSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTAKNEKEASE 226
           PTT  R+E+ T    S+ SR++++C+ +  SLQEGFR+ KA  VGQ KK+TA+NEKEA++
Sbjct: 5   PTTTKRSEQQT----SVTSRVKRDCISFFVSLQEGFRYFKALLVGQGKKMTARNEKEATQ 60

Query: 225 ADLQTAKMQVXXXXXXXXTKKRL 157
           ADL T KMQV        TKK L
Sbjct: 61  ADLLTEKMQVEAADAAEDTKKNL 83


>gb|ACU19406.1| unknown [Glycine max]
          Length = 90

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/87 (51%), Positives = 58/87 (66%)
 Frame = -3

Query: 417 SSPSPTTNSRNEENTQELSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTAKNEK 238
           SS S T ++R +      +S +SR+RK CL +A SLQ+GFR+VKA FVGQ K +TA+NEK
Sbjct: 6   SSSSTTLSNRKK------TSSVSRLRKGCLSFAASLQKGFRYVKAFFVGQVKTITARNEK 59

Query: 237 EASEADLQTAKMQVXXXXXXXXTKKRL 157
           EASEA+L+  KMQV         K RL
Sbjct: 60  EASEAELEATKMQVEATDAAEDIKNRL 86


>ref|NP_565890.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197247|gb|AAM14995.1| Expressed protein
           [Arabidopsis thaliana] gi|21537212|gb|AAM61553.1|
           unknown [Arabidopsis thaliana]
           gi|62318644|dbj|BAD95112.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254446|gb|AEC09540.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 84

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/76 (51%), Positives = 47/76 (61%)
 Frame = -3

Query: 384 EENTQELSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTAKNEKEASEADLQTAK 205
           E + Q   SL  R++  CL  A + QEGF +VKA FVGQ K++TAKNEKEA+EA L   K
Sbjct: 5   ETSRQPAKSLSDRVKTNCLSMAVTCQEGFSYVKAFFVGQTKRLTAKNEKEATEAHLTETK 64

Query: 204 MQVXXXXXXXXTKKRL 157
           MQV         KKRL
Sbjct: 65  MQVDATDEAENAKKRL 80


>ref|XP_002881598.1| hypothetical protein ARALYDRAFT_482856 [Arabidopsis lyrata subsp.
           lyrata] gi|297327437|gb|EFH57857.1| hypothetical protein
           ARALYDRAFT_482856 [Arabidopsis lyrata subsp. lyrata]
          Length = 84

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/76 (51%), Positives = 47/76 (61%)
 Frame = -3

Query: 384 EENTQELSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTAKNEKEASEADLQTAK 205
           E + +   SL  R++  CL  A S QEGF +VKA FVGQ K++TAKNEKEA+EA L   K
Sbjct: 5   ETSQRPSKSLTDRVKTNCLSMAVSCQEGFSYVKAFFVGQTKRLTAKNEKEATEAHLTETK 64

Query: 204 MQVXXXXXXXXTKKRL 157
           MQV         KKRL
Sbjct: 65  MQVDATDEAENAKKRL 80


Top