BLASTX nr result

ID: Coptis23_contig00016279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016279
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24866.3| unnamed protein product [Vitis vinifera]              232   1e-58
ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855...   232   1e-58
ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-56
ref|XP_003545970.1| PREDICTED: uncharacterized protein LOC100787...   208   3e-51
ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817...   207   5e-51

>emb|CBI24866.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  232 bits (592), Expect = 1e-58
 Identities = 122/179 (68%), Positives = 140/179 (78%), Gaps = 1/179 (0%)
 Frame = -3

Query: 1260 EDADSRTVFVNNVHFAATKDTLSRHFNKFGEVLKVVIVTDAATGQPTGSAYIEFMRKEAA 1081
            EDADSRT+FVNNVHFAATKD+LSRHFNKFGEV+KV+IVTDAATGQP GSAY+EFMRKEAA
Sbjct: 519  EDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAA 578

Query: 1080 ELALSLNGTSFMSRILKVVRKSSAYMESSNVLAWPRVSRASPF-AAQLARVPFPRGMPAA 904
            E ALSL+GTSFMSRILKVV++SS + E++  ++WPR++R SPF AA+ ARVPF RG+P A
Sbjct: 579  EHALSLDGTSFMSRILKVVKRSSTHQEAAPGMSWPRIARGSPFAAARFARVPFQRGIPGA 638

Query: 903  FRTRLAVKPGARSLQWKRDTTPAXXXXXXXXXXXXXXXXXXPTGRSLTYVRKDTKPDTN 727
            FR RL VK GARSLQWKRD  P                   PT RSLTYVR + KPD N
Sbjct: 639  FRARLPVKLGARSLQWKRDAQPT---LAESGAPASNNSVPSPTARSLTYVRTEPKPDGN 694


>ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
          Length = 700

 Score =  232 bits (592), Expect = 1e-58
 Identities = 122/179 (68%), Positives = 140/179 (78%), Gaps = 1/179 (0%)
 Frame = -3

Query: 1260 EDADSRTVFVNNVHFAATKDTLSRHFNKFGEVLKVVIVTDAATGQPTGSAYIEFMRKEAA 1081
            EDADSRT+FVNNVHFAATKD+LSRHFNKFGEV+KV+IVTDAATGQP GSAY+EFMRKEAA
Sbjct: 525  EDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAA 584

Query: 1080 ELALSLNGTSFMSRILKVVRKSSAYMESSNVLAWPRVSRASPF-AAQLARVPFPRGMPAA 904
            E ALSL+GTSFMSRILKVV++SS + E++  ++WPR++R SPF AA+ ARVPF RG+P A
Sbjct: 585  EHALSLDGTSFMSRILKVVKRSSTHQEAAPGMSWPRIARGSPFAAARFARVPFQRGIPGA 644

Query: 903  FRTRLAVKPGARSLQWKRDTTPAXXXXXXXXXXXXXXXXXXPTGRSLTYVRKDTKPDTN 727
            FR RL VK GARSLQWKRD  P                   PT RSLTYVR + KPD N
Sbjct: 645  FRARLPVKLGARSLQWKRDAQPT---LAESGAPASNNSVPSPTARSLTYVRTEPKPDGN 700


>ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|222847209|gb|EEE84756.1|
            predicted protein [Populus trichocarpa]
          Length = 678

 Score =  226 bits (575), Expect = 1e-56
 Identities = 121/181 (66%), Positives = 141/181 (77%), Gaps = 1/181 (0%)
 Frame = -3

Query: 1260 EDADSRTVFVNNVHFAATKDTLSRHFNKFGEVLKVVIVTDAATGQPTGSAYIEFMRKEAA 1081
            EDADSRT+FV+NVHFAATKD+LSRHFNKFGEVLKVV+VTDAATGQPTGSAY+EFMRKEAA
Sbjct: 500  EDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVLVTDAATGQPTGSAYVEFMRKEAA 559

Query: 1080 ELALSLNGTSFMSRILKVVRKSSAYMESSNVLAWPRVSRASPFAA-QLARVPFPRGMPAA 904
            + ALSL+GTSFMSRI+KV+++SS+  E+S V+ WPR+SR S +AA + AR PFPRG P  
Sbjct: 560  DNALSLDGTSFMSRIVKVMKRSSSNQEASPVMTWPRISRGSSYAAGRFARTPFPRGTP-I 618

Query: 903  FRTRLAVKPGARSLQWKRDTTPAXXXXXXXXXXXXXXXXXXPTGRSLTYVRKDTKPDTNA 724
            FR RL VKPGARSLQWKRD   A                  P+ RSLTYVR + KPD N+
Sbjct: 619  FRPRLYVKPGARSLQWKRD---AQGSPAESSAAFSGSSVVSPSARSLTYVRTEPKPDGNS 675

Query: 723  G 721
            G
Sbjct: 676  G 676


>ref|XP_003545970.1| PREDICTED: uncharacterized protein LOC100787464 [Glycine max]
          Length = 481

 Score =  208 bits (529), Expect = 3e-51
 Identities = 106/182 (58%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
 Frame = -3

Query: 1263 TEDADSRTVFVNNVHFAATKDTLSRHFNKFGEVLKVVIVTDAATGQPTGSAYIEFMRKEA 1084
            +ED DSRT+FV+NVHFAATKD LSRHFN+FG+VLKV+IVTDAATGQP G+AY+EFMRKEA
Sbjct: 300  SEDVDSRTIFVSNVHFAATKDGLSRHFNRFGDVLKVIIVTDAATGQPKGAAYVEFMRKEA 359

Query: 1083 AELALSLNGTSFMSRILKVVRKSSAYMESSNVLAWPRVSRASPF-AAQLARVPFPRGMPA 907
            A+ ALSL+ TSFMSRILKV++KS+   ES+  +AWPR+ + SPF +A+ +R PFPRG+P 
Sbjct: 360  ADNALSLDNTSFMSRILKVIKKSATPQESAPAMAWPRIVKGSPFPSARFSRHPFPRGIPG 419

Query: 906  AFRTRLAVKPGARSLQWKRDTTPAXXXXXXXXXXXXXXXXXXPTGRSLTYVRKDTKPDTN 727
             FR R  +K GARS+QWKRD   A                  P GR  TY+R ++KP+ +
Sbjct: 420  VFRARPPIKLGARSMQWKRD---AQGSGSDSSSSVNTGNVAAPVGRGFTYIRTESKPEGS 476

Query: 726  AG 721
             G
Sbjct: 477  LG 478


>ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817963 [Glycine max]
          Length = 493

 Score =  207 bits (527), Expect = 5e-51
 Identities = 106/178 (59%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
 Frame = -3

Query: 1263 TEDADSRTVFVNNVHFAATKDTLSRHFNKFGEVLKVVIVTDAATGQPTGSAYIEFMRKEA 1084
            +ED DSRT+FV+NVHFAATKD LSRHFN+FGEVLKV+IVTDAATGQP G+AY+EFMRKEA
Sbjct: 315  SEDVDSRTIFVSNVHFAATKDGLSRHFNRFGEVLKVIIVTDAATGQPKGAAYVEFMRKEA 374

Query: 1083 AELALSLNGTSFMSRILKVVRKSSAYMESSNVLAWPRVSRASPF-AAQLARVPFPRGMPA 907
            A+ ALSL+ TSFMSRILKV++KS+   ES+  +AWPR+ R SPF +A+ +R PFPRG+P 
Sbjct: 375  ADNALSLDNTSFMSRILKVIKKSATTQESAPAMAWPRIVRGSPFPSARFSRHPFPRGIPG 434

Query: 906  AFRTRLAVKPGARSLQWKRDTTPAXXXXXXXXXXXXXXXXXXPTGRSLTYVRKDTKPD 733
            AFR R  +K GARS+QWKRD   +                  P  R  TY+R ++KP+
Sbjct: 435  AFRARPPIKLGARSMQWKRDAQGS-----DSSSSVNTGSVTAPVARGFTYIRTESKPE 487


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