BLASTX nr result

ID: Coptis23_contig00016265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016265
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551341.1| PREDICTED: uncharacterized protein LOC100790...    57   1e-12
ref|XP_003553236.1| PREDICTED: uncharacterized protein LOC100810...    53   1e-11
ref|XP_003518075.1| PREDICTED: putative nuclease HARBI1-like [Gl...    53   1e-11
ref|XP_003551510.1| PREDICTED: putative nuclease HARBI1-like [Gl...    53   2e-11
ref|XP_003522268.1| PREDICTED: putative nuclease HARBI1-like [Gl...    52   3e-11

>ref|XP_003551341.1| PREDICTED: uncharacterized protein LOC100790361 [Glycine max]
          Length = 343

 Score = 57.4 bits (137), Expect(2) = 1e-12
 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -2

Query: 488 RLCARLKGKG-LQSSRWVVVEEQVALFLLIVGHDTRIRHSAFGVIRSSETVHRHFHNVLR 312
           +LC  L+ KG L  ++ V ++E VA+FL I+ H+ + R   F   RS ET+ R F NVLR
Sbjct: 91  KLCRILQEKGQLVKTKNVPIDEVVAMFLHILAHNLKYRVVHFSYCRSMETISRQFKNVLR 150

Query: 311 AILKLGKEVVK 279
           AI+K+ KE +K
Sbjct: 151 AIMKVSKEYLK 161



 Score = 40.4 bits (93), Expect(2) = 1e-12
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = -3

Query: 223 GP*DILITYVLAGWEGSVHDSRMLRSSLTRVRDKLIVPNG 104
           GP D+   YVL GWEGS  DSR+LR +L R ++ L +PNG
Sbjct: 196 GP-DLRFIYVLPGWEGSAGDSRVLRDALHR-QNCLHIPNG 233


>ref|XP_003553236.1| PREDICTED: uncharacterized protein LOC100810207 [Glycine max]
          Length = 372

 Score = 53.1 bits (126), Expect(2) = 1e-11
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = -2

Query: 524 VEGRGVS*NCNQRLCARLKGKG-LQSSRWVVVEEQVALFLLIVGHDTRIRHSAFGVIRSS 348
           +E   +S N    LC  L+ KG L  +R V   E VA+FL I+ H+ + R   F   RS 
Sbjct: 75  IEQLRLSKNAFFNLCRILEEKGGLVRTRNVPTTEAVAMFLHILAHNLKYRVVQFSYCRSK 134

Query: 347 ETVHRHFHNVLRAILKLGKEVVKPARASFSPQMGRSVHPRPWAMRYFD 204
           ET+ R F++VLRA++K+ K+ +     +F P          W  R+F+
Sbjct: 135 ETISRQFNDVLRAVMKVSKDYL-----NFQPCTLEGAEANKW--RWFE 175



 Score = 41.6 bits (96), Expect(2) = 1e-11
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = -3

Query: 223 GP*DILITYVLAGWEGSVHDSRMLRSSLTRVRDKLIVPNG 104
           GP D+   YVL GWEGS  DSR+LR +L R ++KL +P G
Sbjct: 214 GP-DLRFIYVLPGWEGSAGDSRVLRDALRR-QNKLEIPTG 251


>ref|XP_003518075.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 308

 Score = 53.1 bits (126), Expect(2) = 1e-11
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = -2

Query: 524 VEGRGVS*NCNQRLCARLKGKG-LQSSRWVVVEEQVALFLLIVGHDTRIRHSAFGVIRSS 348
           +E   +S N    LC  L+ KG L  +R V   E VA+FL I+ H+ + R   F   RS 
Sbjct: 75  IEQLRLSKNAFFNLCRILQEKGGLVRTRNVPTTEAVAMFLHILAHNLKYRVVQFSYCRSK 134

Query: 347 ETVHRHFHNVLRAILKLGKEVVKPARASFSPQMGRSVHPRPWAMRYFD 204
           ET+ R F++VLRA++K+ K+ +     +F P          W  R+F+
Sbjct: 135 ETISRQFNDVLRAVMKVSKDYL-----NFQPCTLEGAEANKW--RWFE 175



 Score = 41.6 bits (96), Expect(2) = 1e-11
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = -3

Query: 223 GP*DILITYVLAGWEGSVHDSRMLRSSLTRVRDKLIVPNG 104
           GP D+   YVL GWEGS  DSR+LR +L R ++KL +P G
Sbjct: 214 GP-DLRFIYVLPGWEGSAGDSRVLRDALRR-QNKLEIPTG 251


>ref|XP_003551510.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 308

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = -2

Query: 524 VEGRGVS*NCNQRLCARLKGKG-LQSSRWVVVEEQVALFLLIVGHDTRIRHSAFGVIRSS 348
           +E   +S N    LC  L+ KG L  +R V   E VA+FL I+ H+ + R   F   RS 
Sbjct: 75  IEQLRLSKNAFFNLCRILQEKGGLVRTRNVPTTEVVAMFLHILAHNLKYRVVQFSYCRSK 134

Query: 347 ETVHRHFHNVLRAILKLGKEVVKPARASFSPQMGRSVHPRPWAMRYFD 204
           ET+ R F+ VLRA++K+ KE +     +F P          W  R+F+
Sbjct: 135 ETISRQFNYVLRAVMKVSKEYL-----NFQPCTLEGAEANKW--RWFE 175



 Score = 41.6 bits (96), Expect(2) = 2e-11
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = -3

Query: 223 GP*DILITYVLAGWEGSVHDSRMLRSSLTRVRDKLIVPNG 104
           GP D+   YVL GWEGS  DSR+LR +L R ++KL +P G
Sbjct: 214 GP-DLRFIYVLPGWEGSAGDSRVLRDALRR-QNKLEIPTG 251


>ref|XP_003522268.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 308

 Score = 52.0 bits (123), Expect(2) = 3e-11
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = -2

Query: 524 VEGRGVS*NCNQRLCARLKGKG-LQSSRWVVVEEQVALFLLIVGHDTRIRHSAFGVIRSS 348
           +E    S N    LC  L+ KG L  +R V   E VA+FL I+ H+ + R   F   RS 
Sbjct: 75  IEQLRFSKNAFFNLCRILQEKGGLVRTRNVPTTEAVAMFLHILAHNLKYRVVQFSYCRSE 134

Query: 347 ETVHRHFHNVLRAILKLGKEVVKPARASFSPQMGRSVHPRPWAMRYFD 204
           ET+ R F++VLRA++K+ K+ +     +F P          W  R+F+
Sbjct: 135 ETISRKFNDVLRAVMKVSKDYL-----NFQPCTLEGAEANKW--RWFE 175



 Score = 41.6 bits (96), Expect(2) = 3e-11
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = -3

Query: 223 GP*DILITYVLAGWEGSVHDSRMLRSSLTRVRDKLIVPNG 104
           GP D+   YVL GWEGS  DSR+LR +L R ++KL +P G
Sbjct: 214 GP-DLRFIYVLPGWEGSAGDSRVLRDALRR-QNKLEIPTG 251


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