BLASTX nr result

ID: Coptis23_contig00016261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016261
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001764943.1| histone H2A [Physcomitrella patens subsp. pa...    59   5e-07
ref|XP_001769677.1| histone H2A [Physcomitrella patens subsp. pa...    59   5e-07
ref|XP_002365268.1| histone H2A, putative [Toxoplasma gondii ME4...    59   5e-07
gb|AAT08680.1| histone H2A [Hyacinthus orientalis]                     58   7e-07
gb|AAT08677.1| histone H2A [Hyacinthus orientalis]                     58   7e-07

>ref|XP_001764943.1| histone H2A [Physcomitrella patens subsp. patens]
           gi|162683752|gb|EDQ70159.1| histone H2A [Physcomitrella
           patens subsp. patens]
          Length = 148

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -3

Query: 126 AGLQFPVGRLGRYLKKGRYAERVGAGAP 43
           AGLQFPVGRLGRYLKKGRYA+RVG+GAP
Sbjct: 23  AGLQFPVGRLGRYLKKGRYAQRVGSGAP 50


>ref|XP_001769677.1| histone H2A [Physcomitrella patens subsp. patens]
           gi|162679026|gb|EDQ65478.1| histone H2A [Physcomitrella
           patens subsp. patens]
          Length = 148

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -3

Query: 126 AGLQFPVGRLGRYLKKGRYAERVGAGAP 43
           AGLQFPVGRLGRYLKKGRYA+RVG+GAP
Sbjct: 23  AGLQFPVGRLGRYLKKGRYAQRVGSGAP 50


>ref|XP_002365268.1| histone H2A, putative [Toxoplasma gondii ME49]
           gi|45862330|gb|AAS78927.1| histone H2A.1 [Toxoplasma
           gondii] gi|211962932|gb|EEA98127.1| histone H2A,
           putative [Toxoplasma gondii ME49]
          Length = 128

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -3

Query: 126 AGLQFPVGRLGRYLKKGRYAERVGAGAP 43
           AGLQFPVGR+GRYLKKGRYA+RVGAGAP
Sbjct: 23  AGLQFPVGRIGRYLKKGRYAKRVGAGAP 50


>gb|AAT08680.1| histone H2A [Hyacinthus orientalis]
          Length = 152

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 126 AGLQFPVGRLGRYLKKGRYAERVGAGAP 43
           AGLQFPVGRLGRYLKKGRYA+RVG GAP
Sbjct: 30  AGLQFPVGRLGRYLKKGRYAQRVGTGAP 57


>gb|AAT08677.1| histone H2A [Hyacinthus orientalis]
          Length = 152

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 126 AGLQFPVGRLGRYLKKGRYAERVGAGAP 43
           AGLQFPVGRLGRYLKKGRYA+RVG GAP
Sbjct: 30  AGLQFPVGRLGRYLKKGRYAQRVGTGAP 57


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