BLASTX nr result

ID: Coptis23_contig00016238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016238
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34055.3| unnamed protein product [Vitis vinifera]              303   4e-80
emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]   295   1e-77
ref|XP_003593218.1| Methyl binding domain protein [Medicago trun...   261   2e-67
ref|XP_003547086.1| PREDICTED: uncharacterized protein LOC100820...   257   3e-66
ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|2...   255   8e-66

>emb|CBI34055.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  303 bits (776), Expect = 4e-80
 Identities = 154/271 (56%), Positives = 185/271 (68%)
 Frame = -1

Query: 888 LDGQWGSRRKKRKVVDASDFGDAFPIGWKLLLSLKRKEGSVSLYCRRYISPTGQQFVSCK 709
           LDGQW SRRKKRK+VDAS FGDA PIGWKLLL LKR+EG VS+YCRRYISP+G+QFVSCK
Sbjct: 83  LDGQWCSRRKKRKIVDASGFGDALPIGWKLLLGLKRREGRVSVYCRRYISPSGEQFVSCK 142

Query: 708 EVSSYLLPYFGFQDENHPNSLHSDESEYDACRLSSGSSAGLTHKDASTKEDLXXXXXXXX 529
           E ++YL  YFG  D N P     D++     R+SS S AG THKD    ED+        
Sbjct: 143 EAAAYLQSYFGLADTNQPMG-QRDDNIQQVNRISSESLAGSTHKDDDLGEDIIPISVLPS 201

Query: 528 XXXXADHEKQLILLGTENLAEVEIKDLLECHICKMNFDEKDAYLQHLLSSHQKSAKRSRQ 349
                ++EK++ LLG ENLAEVE++DL ECH C M FDEKD YLQHLLSSHQ++ +R R 
Sbjct: 202 SSISYEYEKEVALLGIENLAEVEVRDLFECHKCNMTFDEKDTYLQHLLSSHQRTTRRYR- 260

Query: 348 SSTSVCDGVIIRDGKFECQFCHKIFDERRRYNGHVGVHVRNYVRSLEPTPGDKTKRVKVN 169
             TSV DGVI++DGK+ECQFCHKIF ERRRYNGHVG+HVRNYVR+ E  PG  + +  V 
Sbjct: 261 LGTSVGDGVIVKDGKYECQFCHKIFQERRRYNGHVGIHVRNYVRNFEDMPGRPSVQKTVE 320

Query: 168 XXXXXXXXXXXSRVDPSVEMDVGSDLPISLA 76
                      S++D  +E+   S    S A
Sbjct: 321 SPSRDELPSRTSKMDALIEIAQSSIFETSAA 351


>emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]
          Length = 849

 Score =  295 bits (754), Expect = 1e-77
 Identities = 150/271 (55%), Positives = 179/271 (66%)
 Frame = -1

Query: 888  LDGQWGSRRKKRKVVDASDFGDAFPIGWKLLLSLKRKEGSVSLYCRRYISPTGQQFVSCK 709
            LDGQW SRRKKRK+VDAS FGDA PIGWKLLL LKR+EG VS+YCRRYISP+G+QFVSCK
Sbjct: 229  LDGQWCSRRKKRKIVDASGFGDALPIGWKLLLGLKRREGRVSVYCRRYISPSGEQFVSCK 288

Query: 708  EVSSYLLPYFGFQDENHPNSLHSDESEYDACRLSSGSSAGLTHKDASTKEDLXXXXXXXX 529
            E ++YL  YFG  D N P     D  +           AG THKD    ED+        
Sbjct: 289  EAAAYLQSYFGLADTNQPMGQRDDNIQ---------QLAGSTHKDDDLGEDIIPISVLPS 339

Query: 528  XXXXADHEKQLILLGTENLAEVEIKDLLECHICKMNFDEKDAYLQHLLSSHQKSAKRSRQ 349
                 ++EK++ LLG ENLAEVE++DL ECH C M FDEKD YLQHLLSSHQ++ +R R 
Sbjct: 340  SSISYEYEKEVALLGIENLAEVEVRDLFECHKCNMTFDEKDTYLQHLLSSHQRTTRRYR- 398

Query: 348  SSTSVCDGVIIRDGKFECQFCHKIFDERRRYNGHVGVHVRNYVRSLEPTPGDKTKRVKVN 169
              TSV DGVI++DGK+ECQFCHKIF ERRRYNGHVG+HVRNYVR+ E  PG  + +  V 
Sbjct: 399  LGTSVGDGVIVKDGKYECQFCHKIFQERRRYNGHVGIHVRNYVRNFEDMPGRPSVQKTVE 458

Query: 168  XXXXXXXXXXXSRVDPSVEMDVGSDLPISLA 76
                       S++D  +E+   S    S A
Sbjct: 459  SPSRDELPSRTSKMDALIEIAQSSIFETSAA 489


>ref|XP_003593218.1| Methyl binding domain protein [Medicago truncatula]
           gi|355482266|gb|AES63469.1| Methyl binding domain
           protein [Medicago truncatula]
          Length = 805

 Score =  261 bits (666), Expect = 2e-67
 Identities = 130/235 (55%), Positives = 162/235 (68%), Gaps = 4/235 (1%)
 Frame = -1

Query: 888 LDGQWGSRRKKRKVVDASDFGDAFPIGWKLLLSLKRKEGSVSLYCRRYISPTGQQFVSCK 709
           L GQWGSRR+KR++VDASDFGD  P+GWKLLLSLKRK+G   +YCRRYISP GQQF+SCK
Sbjct: 198 LVGQWGSRRRKRRIVDASDFGDVLPLGWKLLLSLKRKDGRAWIYCRRYISPNGQQFLSCK 257

Query: 708 EVSSYLLPYFGFQDENHPNSLHSD----ESEYDACRLSSGSSAGLTHKDASTKEDLXXXX 541
           EVSSYL   FG  D     +  S+    E       +S+ ++A +  K+   ++ +    
Sbjct: 258 EVSSYLQSLFGHADAQLQITQRSENILPELRVTTENVSNPAAASVARKEQDQRQIVATNS 317

Query: 540 XXXXXXXXADHEKQLILLGTENLAEVEIKDLLECHICKMNFDEKDAYLQHLLSSHQKSAK 361
                    +  K++ LL  +NLA+V+I+DL ECH C M FDEKDAYLQHLLS HQK+ +
Sbjct: 318 DASGLSVYNERFKEIALLEMDNLADVQIRDLFECHKCSMTFDEKDAYLQHLLSIHQKTTR 377

Query: 360 RSRQSSTSVCDGVIIRDGKFECQFCHKIFDERRRYNGHVGVHVRNYVRSLEPTPG 196
           R R  S SV DGVII+DGKFECQFCHK+F E+RRYN HVG+HVRNY+R  E  PG
Sbjct: 378 RYRLGS-SVSDGVIIKDGKFECQFCHKVFLEKRRYNSHVGIHVRNYLRRAEDLPG 431


>ref|XP_003547086.1| PREDICTED: uncharacterized protein LOC100820612 [Glycine max]
          Length = 443

 Score =  257 bits (656), Expect = 3e-66
 Identities = 129/231 (55%), Positives = 162/231 (70%)
 Frame = -1

Query: 888 LDGQWGSRRKKRKVVDASDFGDAFPIGWKLLLSLKRKEGSVSLYCRRYISPTGQQFVSCK 709
           L GQWGSRRKKR++VD++DFGD  P+ WK+LL LKRK+G   +YCRRYISP+GQ FVSCK
Sbjct: 193 LPGQWGSRRKKRRIVDSADFGDVLPLSWKILLGLKRKDGRAWIYCRRYISPSGQHFVSCK 252

Query: 708 EVSSYLLPYFGFQDENHPNSLHSDESEYDACRLSSGSSAGLTHKDASTKEDLXXXXXXXX 529
           EVSSYL    G  D     S  + E+     +LS+ +SA +T +     + +        
Sbjct: 253 EVSSYLQSLLGNGDAQLQISRRT-ENVVQEHKLSADNSAAVTKEHQDEMQIVAVNMAVSG 311

Query: 528 XXXXADHEKQLILLGTENLAEVEIKDLLECHICKMNFDEKDAYLQHLLSSHQKSAKRSRQ 349
                +  K++ LLG ENLA+V+I DLLEC  C M+F+EKD YLQHLLS HQ++ +R R 
Sbjct: 312 LSAANERVKEVALLGIENLADVQIHDLLECRKCNMSFNEKDLYLQHLLSFHQRTTRRYRL 371

Query: 348 SSTSVCDGVIIRDGKFECQFCHKIFDERRRYNGHVGVHVRNYVRSLEPTPG 196
            S SV DGVII+DGKFECQFCHK+F ERRRYNGHVG+HVRNYVR +E +PG
Sbjct: 372 GS-SVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEDSPG 421


>ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|222847441|gb|EEE84988.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score =  255 bits (652), Expect = 8e-66
 Identities = 128/237 (54%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
 Frame = -1

Query: 888 LDGQWGSRRKKRKVVDASDFGDAFPIGWKLLLSLKRKEGSVSLYCRRYISPTGQQFVSCK 709
           L GQW SRRKKRK+VDA +FGD  P+GWKL+L LKRKEG   +YCRRY+SP+GQQF+SCK
Sbjct: 240 LGGQWCSRRKKRKIVDAGEFGDFLPVGWKLILGLKRKEGRAWVYCRRYLSPSGQQFISCK 299

Query: 708 EVSSYLL----PYFGFQDENHPNSLHSDESEYDACRLSSGSSAGLTHKDASTKEDLXXXX 541
           +VS+YL     PY   Q ++H    HS + ++          AG   +    ++ +    
Sbjct: 300 DVSAYLQSLVGPYDAQQAKDHTG--HSIQQDH-----GGAPHAGAIERLEDQRQSI---- 348

Query: 540 XXXXXXXXADHEKQLILLGTENLAEVEIKDLLECHICKMNFDEKDAYLQHLLSSHQKSAK 361
                    +H+KQ+ LL T+NLAEV+I+DL ECH C+M FDEK  YL+HLLS HQ++ +
Sbjct: 349 ---------EHQKQVSLLETDNLAEVQIRDLFECHKCRMTFDEKGTYLEHLLSFHQRTTR 399

Query: 360 RSRQSSTSVCDGVIIRDGKFECQFCHKIFDERRRYNGHVGVHVRNYVRSLEPTPGDK 190
           R R  S SV DGVI++DGKFECQFCHK+F ERRRYNGHVG+HVRNYVR +E +PG K
Sbjct: 400 RYRLGS-SVGDGVIVKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEDSPGVK 455


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