BLASTX nr result

ID: Coptis23_contig00016232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016232
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...    69   6e-21
emb|CBI17106.3| unnamed protein product [Vitis vinifera]               69   6e-21
ref|XP_003563234.1| PREDICTED: protein argonaute 1D-like [Brachy...    64   2e-19
ref|XP_002298162.1| argonaute protein group [Populus trichocarpa...    68   5e-19
ref|XP_002437641.1| hypothetical protein SORBIDRAFT_10g031030 [S...    67   7e-19

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score = 69.3 bits (168), Expect(2) = 6e-21
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -2

Query: 224 PSIAAVVASMDWSEISKYRGMVSAQHPHQELIQDLYSLVEDPQK 93
           PSIAAVVASMDW E++KYRG+VSAQH  +E+IQDLY    DP K
Sbjct: 774 PSIAAVVASMDWPEVTKYRGLVSAQHHREEIIQDLYKTTADPHK 817



 Score = 56.2 bits (134), Expect(2) = 6e-21
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = -1

Query: 96  EGTSHAGMIRELLISFRKSTGFKPQRIIFYRD 1
           +G +H GMIRELLI+FR+STG+KP RIIFYRD
Sbjct: 817 KGVTHGGMIRELLIAFRRSTGYKPSRIIFYRD 848


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 69.3 bits (168), Expect(2) = 6e-21
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -2

Query: 224 PSIAAVVASMDWSEISKYRGMVSAQHPHQELIQDLYSLVEDPQK 93
           PSIAAVVASMDW E++KYRG+VSAQH  +E+IQDLY    DP K
Sbjct: 768 PSIAAVVASMDWPEVTKYRGLVSAQHHREEIIQDLYKTTADPHK 811



 Score = 56.2 bits (134), Expect(2) = 6e-21
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = -1

Query: 96  EGTSHAGMIRELLISFRKSTGFKPQRIIFYRD 1
           +G +H GMIRELLI+FR+STG+KP RIIFYRD
Sbjct: 811 KGVTHGGMIRELLIAFRRSTGYKPSRIIFYRD 842


>ref|XP_003563234.1| PREDICTED: protein argonaute 1D-like [Brachypodium distachyon]
          Length = 1044

 Score = 64.3 bits (155), Expect(2) = 2e-19
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = -2

Query: 224 PSIAAVVASMDWSEISKYRGMVSAQHPHQELIQDLYSLVEDPQK 93
           PSIAAVVAS DW E++KY G+VSAQ   QELI+DLY +  DPQ+
Sbjct: 769 PSIAAVVASQDWPEVTKYAGLVSAQSHRQELIEDLYKVTHDPQR 812



 Score = 56.2 bits (134), Expect(2) = 2e-19
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -1

Query: 93  GTSHAGMIRELLISFRKSTGFKPQRIIFYRD 1
           GT H GMIRELLISF++STG KPQRIIFYRD
Sbjct: 813 GTIHGGMIRELLISFKRSTGEKPQRIIFYRD 843


>ref|XP_002298162.1| argonaute protein group [Populus trichocarpa]
           gi|222845420|gb|EEE82967.1| argonaute protein group
           [Populus trichocarpa]
          Length = 904

 Score = 67.8 bits (164), Expect(2) = 5e-19
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -2

Query: 224 PSIAAVVASMDWSEISKYRGMVSAQHPHQELIQDLYSLVEDPQK 93
           PSIAAVVASMDW E++KYRG+VSAQ   +E+IQDLY   +DPQK
Sbjct: 644 PSIAAVVASMDWPEVTKYRGLVSAQAHREEIIQDLYKKYQDPQK 687



 Score = 51.2 bits (121), Expect(2) = 5e-19
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -1

Query: 96  EGTSHAGMIRELLISFRKSTGFKPQRIIFYRD 1
           +G  H+GMIREL I+FR+STG KP RIIFYRD
Sbjct: 687 KGLVHSGMIRELFIAFRRSTGQKPHRIIFYRD 718


>ref|XP_002437641.1| hypothetical protein SORBIDRAFT_10g031030 [Sorghum bicolor]
           gi|241915864|gb|EER89008.1| hypothetical protein
           SORBIDRAFT_10g031030 [Sorghum bicolor]
          Length = 1016

 Score = 67.0 bits (162), Expect(2) = 7e-19
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -2

Query: 224 PSIAAVVASMDWSEISKYRGMVSAQHPHQELIQDLYSLVEDPQK 93
           PSIAAVVAS DW E++KY G+VSAQ   QELI+DLY +V DPQK
Sbjct: 739 PSIAAVVASQDWPEVTKYAGLVSAQSHRQELIEDLYKVVHDPQK 782



 Score = 51.6 bits (122), Expect(2) = 7e-19
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -1

Query: 96  EGTSHAGMIRELLISFRKSTGFKPQRIIFYRD 1
           +GT   GMIRELLISF++STG KPQRI+FYRD
Sbjct: 782 KGTICGGMIRELLISFKRSTGQKPQRILFYRD 813


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