BLASTX nr result

ID: Coptis23_contig00016209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016209
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|2...   211   5e-53
ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-tra...   207   1e-51
gb|AFK40756.1| unknown [Medicago truncatula]                          203   1e-50
ref|XP_004134516.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   197   1e-48
ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp....   191   4e-47

>ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|222845172|gb|EEE82719.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  211 bits (537), Expect = 5e-53
 Identities = 108/156 (69%), Positives = 117/156 (75%)
 Frame = +3

Query: 9   KRETIGLSFCLCLTSVFTQQPQIALAEEALKYQFTVAPSGLEFCDQVVGYGLEATTGQLI 188
           +RE IGL FC     V  QQ   A AEEA   + TVAPSGL FCD++VG GLEA  GQLI
Sbjct: 55  RREAIGLGFCAGFLDVLLQQQLTATAEEA-PCELTVAPSGLAFCDKIVGTGLEAVKGQLI 113

Query: 189 KAHYVGKLENGKIFDSSYNRGKPLTFRIGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKL 368
           KAHYVGKLE+GKIFDSSYNRGKPLTFR+GVGEV              PPMLAGGKR LKL
Sbjct: 114 KAHYVGKLESGKIFDSSYNRGKPLTFRVGVGEVIKGWDQGILGGDGIPPMLAGGKRKLKL 173

Query: 369 RPELGYGVRGAGCKAGSCVIPPNSVLLFDVEFIGKA 476
            PEL YG+RGAGCK GSC+IPP+SVLLFDVEFIGKA
Sbjct: 174 PPELAYGMRGAGCKGGSCIIPPDSVLLFDVEFIGKA 209


>ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-trans isomerase 3,
           chloroplastic [Vitis vinifera]
           gi|297738045|emb|CBI27246.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  207 bits (526), Expect = 1e-51
 Identities = 104/156 (66%), Positives = 117/156 (75%)
 Frame = +3

Query: 9   KRETIGLSFCLCLTSVFTQQPQIALAEEALKYQFTVAPSGLEFCDQVVGYGLEATTGQLI 188
           +RE IG  FC  +  VF Q  Q ++A +    + TVAPSGL FCD+VVG G EA  GQLI
Sbjct: 62  RREAIGFGFCFSILDVFLQA-QPSVAAQTAPCELTVAPSGLAFCDKVVGTGPEAVEGQLI 120

Query: 189 KAHYVGKLENGKIFDSSYNRGKPLTFRIGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKL 368
           KAHYVGKLE+GK+FDSSY+RGKPLTFRIGVGEV              PPMLAGGKRTLKL
Sbjct: 121 KAHYVGKLESGKVFDSSYDRGKPLTFRIGVGEVIRGWDQGILGGDGVPPMLAGGKRTLKL 180

Query: 369 RPELGYGVRGAGCKAGSCVIPPNSVLLFDVEFIGKA 476
            PELGYG RGAGC+ GSC+IPP+SVLLFDVEFIGKA
Sbjct: 181 PPELGYGTRGAGCRGGSCIIPPDSVLLFDVEFIGKA 216


>gb|AFK40756.1| unknown [Medicago truncatula]
          Length = 207

 Score =  203 bits (516), Expect = 1e-50
 Identities = 106/160 (66%), Positives = 117/160 (73%), Gaps = 2/160 (1%)
 Frame = +3

Query: 3   LSKRETIGLSFCLCLTSVFTQQPQI--ALAEEALKYQFTVAPSGLEFCDQVVGYGLEATT 176
           L +RE IGLS    L     Q P I  A A EA+  Q TVAPSGL +CD+VVGYG +A  
Sbjct: 49  LKRREAIGLSLSFGLLHSLLQ-PIIPTATAAEAVPCQLTVAPSGLSYCDKVVGYGPQAVK 107

Query: 177 GQLIKAHYVGKLENGKIFDSSYNRGKPLTFRIGVGEVXXXXXXXXXXXXXXPPMLAGGKR 356
           GQLIKAHYVG+LENGK+FDSSYNRGKPLTFR+GVGEV              PPML GGKR
Sbjct: 108 GQLIKAHYVGRLENGKVFDSSYNRGKPLTFRVGVGEVIKGWDVGILGDDGIPPMLTGGKR 167

Query: 357 TLKLRPELGYGVRGAGCKAGSCVIPPNSVLLFDVEFIGKA 476
           TLKL PE GYG RGAGCK GSCVIPP++VLLFDVEF+GKA
Sbjct: 168 TLKLPPEFGYGSRGAGCKGGSCVIPPDAVLLFDVEFVGKA 207


>ref|XP_004134516.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13,
           chloroplastic-like isoform 1 [Cucumis sativus]
          Length = 214

 Score =  197 bits (500), Expect = 1e-48
 Identities = 102/156 (65%), Positives = 111/156 (71%)
 Frame = +3

Query: 9   KRETIGLSFCLCLTSVFTQQPQIALAEEALKYQFTVAPSGLEFCDQVVGYGLEATTGQLI 188
           +RE IG  F L L  V  Q   +  A EA   + T APSGL FCD+VVG G EA  GQLI
Sbjct: 61  RREAIGCGFLLGLGKVLLQP--LPAAAEATPCELTTAPSGLAFCDKVVGSGPEAEKGQLI 118

Query: 189 KAHYVGKLENGKIFDSSYNRGKPLTFRIGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKL 368
           KAHYVGKLE+GK+FDSSYNRGKPLTFR+GVGEV              P ML GGKR LKL
Sbjct: 119 KAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKL 178

Query: 369 RPELGYGVRGAGCKAGSCVIPPNSVLLFDVEFIGKA 476
            PELGYG RGAGC+ GSC+IPPNSVLLFDVEFIGKA
Sbjct: 179 PPELGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 214


>ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311065|gb|EFH41489.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/134 (69%), Positives = 103/134 (76%)
 Frame = +3

Query: 75  IALAEEALKYQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDSSYNRGK 254
           ++   E    +F+V+PSGL FCD+VVGYG EA  GQLIKAHYVGKLENGK+FDSSYNRGK
Sbjct: 75  VSALAETTSCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGK 134

Query: 255 PLTFRIGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLRPELGYGVRGAGCKAGSCVIPP 434
           PLTFRIGVGEV              PPML GGKRTLK+ PEL YG RGAGCK GSC+IPP
Sbjct: 135 PLTFRIGVGEVIRGWDQGILGSDGIPPMLTGGKRTLKIPPELAYGDRGAGCKGGSCLIPP 194

Query: 435 NSVLLFDVEFIGKA 476
            SVLLFD+EFIGKA
Sbjct: 195 ASVLLFDIEFIGKA 208


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