BLASTX nr result

ID: Coptis23_contig00016199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016199
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|2...   342   1e-91
ref|XP_002314299.1| predicted protein [Populus trichocarpa] gi|2...   314   4e-83
ref|XP_002270359.1| PREDICTED: transcription factor RAX1 [Vitis ...   311   2e-82
ref|XP_002276209.1| PREDICTED: transcription factor RAX1-like [V...   308   2e-81
ref|XP_002331475.1| predicted protein [Populus trichocarpa] gi|2...   308   2e-81

>ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|222867542|gb|EEF04673.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  342 bits (877), Expect = 1e-91
 Identities = 179/337 (53%), Positives = 223/337 (66%), Gaps = 19/337 (5%)
 Frame = +3

Query: 162  MGRAPCCDKANVKKGPWSPEEDTKLKEYIEKYGTGGNWIALPYKAGLRRCGKSCRLRWLN 341
            MGRAPCCDKANVK+GPWSPEED KLKEY+ K+GTGGNWIALP KAGL+RCGKSCRLRWLN
Sbjct: 1    MGRAPCCDKANVKRGPWSPEEDAKLKEYMAKHGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 342  YLRPNIKHGQFSDDEDRIICNLYASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKFMGI 521
            YLRPNIKHG+FSDDEDRIIC+LYA+IGSRWSIIAAQLPGRTDNDIKNYWNTKLKKK MG 
Sbjct: 61   YLRPNIKHGEFSDDEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGS 120

Query: 522  IPPSQMK---------------TLPPNFQSSFQTASTYQNSINFYSLSKSPQGLEALSIP 656
            I P  ++               +LP +  +    + ++  S N Y+ + +    E +S  
Sbjct: 121  INPDALRKPQQAAHFSSLLHATSLPSSPSTPLSPSPSFTCSNNSYNYTLARSFTEPISFS 180

Query: 657  SNFLNNSDKYATRSTLTSLHESQENLVGLMHNYGENENLLMFGGEPSCSSSDGSC-NQMT 833
            S+ L+N+       T  S+ + QE  VG M NY   +NL+MFGGE SCSSSDGSC NQM+
Sbjct: 181  SSPLSNNS-----FTTASMLQPQETFVGSMQNYQVKDNLIMFGGEASCSSSDGSCSNQMS 235

Query: 834  YNKDIEYEYNXXXXXXXXXXXXESYFFNGISENQKGILASGPV---XXXXXXXXXXXXXX 1004
            + K+ EYE+             ++Y  N + ++QK +++SG                   
Sbjct: 236  HVKE-EYEHGDGANNNTGQVGLQNYLHNRVEDDQKLMVSSGFAGHDVLNGWTGKQIGLWE 294

Query: 1005 PLPLDYGLEDIKQLVSTNDCSNFFSGETKTQGRIMYF 1115
              PLDYGLE+IKQL+ST+ C+NF   E KT  + MY+
Sbjct: 295  ENPLDYGLEEIKQLISTSSCNNFLFDENKTAEKAMYY 331


>ref|XP_002314299.1| predicted protein [Populus trichocarpa] gi|222850707|gb|EEE88254.1|
            predicted protein [Populus trichocarpa]
          Length = 338

 Score =  314 bits (804), Expect = 4e-83
 Identities = 180/345 (52%), Positives = 222/345 (64%), Gaps = 27/345 (7%)
 Frame = +3

Query: 162  MGRAPCCDKANVKKGPWSPEEDTKLKEYIEKYGTGGNWIALPYKAGLRRCGKSCRLRWLN 341
            MGRAPCCDKANVKKGPWSPEED+KLKEYIEKYGTGGNWIALP KAGL+RCGKSCRLRWLN
Sbjct: 1    MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 342  YLRPNIKHGQFSDDEDRIICNLYASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKFMGI 521
            YLRPNIKHG+FSD+EDR+IC+L+A+IGSRWSIIAAQLPGRTDNDIKNYWNTKLKKK M +
Sbjct: 61   YLRPNIKHGEFSDEEDRVICSLFANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMAM 120

Query: 522  IPPSQMKTLPPNFQSSFQT---------ASTYQN---SINFYSLSKSPQGLEALS-IPSN 662
             P SQ KT  P F SS QT          S Y++   S ++YS +KS  G + +S IPS+
Sbjct: 121  APQSQRKT--PPFPSSDQTDPPLPSHSLLSIYKDSGGSFSYYSQNKSFTGFDPISQIPSS 178

Query: 663  FLNNSDKYATRSTLTSLHESQENLVGLMHNY--GENENLLMFGGEPSCSS-SDGSCNQMT 833
             L+N++     ++L     SQE L   M  Y     +N L+FG E SCSS SDGSC+Q++
Sbjct: 179  LLSNNNVSFATNSLLFQPTSQEGLFSPMQYYHPAVKDNFLVFGSEASCSSNSDGSCSQIS 238

Query: 834  YNKDIEYEYNXXXXXXXXXXXXESYFFNGISENQKGILA---SGPVXXXXXXXXXXXXXX 1004
            Y +    + +            E+Y      +NQK +L+    G                
Sbjct: 239  YGRYEIKQEDMGFHSLMSNNGYENY------QNQKFMLSYGNHGVENLNQWVEKPNGNTG 292

Query: 1005 PLPLDYGL-EDIKQLVSTNDCSNFFS-------GETKTQGRIMYF 1115
              P DY L ED+KQL+S++  +N           E KTQ ++MY+
Sbjct: 293  ETPSDYDLVEDVKQLISSSSNNNIIPCNDSLLIDENKTQEKVMYY 337


>ref|XP_002270359.1| PREDICTED: transcription factor RAX1 [Vitis vinifera]
            gi|297739959|emb|CBI30141.3| unnamed protein product
            [Vitis vinifera]
          Length = 342

 Score =  311 bits (798), Expect = 2e-82
 Identities = 175/349 (50%), Positives = 218/349 (62%), Gaps = 31/349 (8%)
 Frame = +3

Query: 162  MGRAPCCDKANVKKGPWSPEEDTKLKEYIEKYGTGGNWIALPYKAGLRRCGKSCRLRWLN 341
            MGRAPCCDKANVKKGPWSPEED+KLKEYIEKYGTGGNWIALP KAGL+RCGKSCRLRWLN
Sbjct: 1    MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 342  YLRPNIKHGQFSDDEDRIICNLYASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKFMGI 521
            YLRPNIKHG+FSDDEDRIIC+++ASIGS+WS+IA  LPGRTDNDIKNYWNTKLKKK MG+
Sbjct: 61   YLRPNIKHGEFSDDEDRIICSVFASIGSKWSVIANYLPGRTDNDIKNYWNTKLKKKLMGM 120

Query: 522  IPPSQMKTLPPNFQSSFQ----------------TASTYQ-NSINFYSLSKSP-----QG 635
            +P SQ K     F    Q                T+S+Y+ NS N Y    +P       
Sbjct: 121  VPVSQRKPHQATFSHHLQTYSSLSSPSHAVTTTATSSSYESNSSNPYYTPAAPTPTSFAR 180

Query: 636  LEAL-SIPSNFLNNSDKYATRSTLTSLHESQENLVGLMHNYGENENLLMFGGEPSCSSSD 812
            LE + SIPS+ LN +    T ST  +    QE     +H+Y   +NLL+   E S SS D
Sbjct: 181  LEPISSIPSSLLNIN----TGSTAAAAIHPQEGFASPVHHYQVKDNLLI---EASSSSDD 233

Query: 813  GS-CNQMTYNKDIEYEYNXXXXXXXXXXXXESYFFNGI-SENQKGILASGPVXXXXXXXX 986
            GS  NQ++  K+ EY+              ++Y + G+  +NQ+ ++++           
Sbjct: 234  GSGSNQISQGKEPEYDQYGAVGGRYEQLGFQNYVYTGLDDQNQRFMISNSSGGGGGSGSH 293

Query: 987  XXXXXXP------LPLDYGLEDIKQLVSTNDCSNFFSGETKTQGRIMYF 1115
                  P       PLD GLE+ KQL+S N C+NF   E KT+ R++Y+
Sbjct: 294  GWTDQRPNGMLGEPPLDLGLEEFKQLISANLCNNFSFDENKTEERVVYY 342


>ref|XP_002276209.1| PREDICTED: transcription factor RAX1-like [Vitis vinifera]
          Length = 317

 Score =  308 bits (789), Expect = 2e-81
 Identities = 177/330 (53%), Positives = 209/330 (63%), Gaps = 12/330 (3%)
 Frame = +3

Query: 162  MGRAPCCDKANVKKGPWSPEEDTKLKEYIEKYGTGGNWIALPYKAGLRRCGKSCRLRWLN 341
            MGRAPCCDKANVKKGPWSPEED+KLK YIEKYGTGGNWIALP KAGL+RCGKSCRLRWLN
Sbjct: 1    MGRAPCCDKANVKKGPWSPEEDSKLKAYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 342  YLRPNIKHGQFSDDEDRIICNLYASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKFMGI 521
            YLRPNIKHG+FSDDEDRIIC L+A++GSRWS+IA +LPGRTDNDIKNYWNTKLKKK MG+
Sbjct: 61   YLRPNIKHGEFSDDEDRIICTLFANMGSRWSVIATRLPGRTDNDIKNYWNTKLKKKVMGM 120

Query: 522  IPPSQMKTLPPNFQSSFQTASTYQNSINFYSLSKSPQGLEALSIPSNFLNNSDKYATRST 701
               SQ K LPP F S     S   +S  +   S  P     +  PS  LNN+    T   
Sbjct: 121  FSSSQRK-LPP-FPSVQNPPSPSISSSYYIPPSTFPGHELPIPFPSTHLNNNTSPLTN-- 176

Query: 702  LTSLHESQENLVGLMHNYGENENLLMFGGEPSCSSSDGSCNQMTYNKDIEYEYNXXXXXX 881
              SL ++QE   G    Y   +NL MF  E SCSSSDGS +Q+++ +DI+ E        
Sbjct: 177  -VSLLQTQETFAGPGQYYPVKDNLFMFASEASCSSSDGSGSQISFGRDIKQE-------- 227

Query: 882  XXXXXXESYFFNGISENQKGILASGPVXXXXXXXXXXXXXXP------LPLD-YGL--ED 1034
                  +SY   G  EN K ++  G                P       PLD Y L  ED
Sbjct: 228  -EMGNFQSYIPTGFEENHKFMMGYGGSNGGHDHNVNHWPEKPNGCFGGSPLDQYNLDQED 286

Query: 1035 IK-QLVS-TNDC-SNFFSGETKTQGRIMYF 1115
            +K QL+S +N C S+FF  E KTQ ++MY+
Sbjct: 287  VKQQLISCSNGCTSSFFIDENKTQEKVMYY 316


>ref|XP_002331475.1| predicted protein [Populus trichocarpa] gi|222873553|gb|EEF10684.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  308 bits (789), Expect = 2e-81
 Identities = 183/346 (52%), Positives = 219/346 (63%), Gaps = 29/346 (8%)
 Frame = +3

Query: 162  MGRAPCCDKANVKKGPWSPEEDTKLKEYIEKYGTGGNWIALPYKAGLRRCGKSCRLRWLN 341
            MGRAPCCDKANVKKGPWSPEED+KLKEYIEKYGTGGNWIALP KAGL+RCGKSCRLRWLN
Sbjct: 1    MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 342  YLRPNIKHGQFSDDEDRIICNLYASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKFMGI 521
            YLRPN+KHG+FSD+EDR+IC+L+ASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKK M +
Sbjct: 61   YLRPNLKHGEFSDEEDRVICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMAM 120

Query: 522  IPPSQMKTLPPNFQSSFQT-------ASTYQN---SINFYSLSKSPQGLEALS-IPSNFL 668
             P SQ K  PP FQS  QT        S Y++   S ++YS ++S  G E +S IPS+ L
Sbjct: 121  APQSQRK--PPTFQSPHQTPPLSHSLPSMYKDSGGSFSYYSQNRSFTGFEPISQIPSSLL 178

Query: 669  N-NSDKYATRSTLTSLHESQENLVGLMHNYGE-NENLLMFGGEPSCSS-SDGSCNQMTYN 839
            + NS   AT S L     +QE L   M  Y    +N ++FG E SCSS SDGSC+ ++Y 
Sbjct: 179  STNSVSLATNSLL--FQTTQEGLFSPMQYYHPVKDNYMVFGSEASCSSNSDGSCSLISYG 236

Query: 840  KDIEYEYNXXXXXXXXXXXXESYFFNGI-SENQKGILASGPVXXXXXXXXXXXXXXPL-- 1010
            ++I+ E                   NG   +NQK +L SG                 +  
Sbjct: 237  REIKQE---------DMGFHSLMSSNGYGDQNQKVMLGSGNNGVEILNQWVEKPNGNIGE 287

Query: 1011 -PLDYG-LEDIKQLVS----------TNDCSNFFSGETKTQGRIMY 1112
             P DY  +ED+KQ VS          +N+  N    E KT   +MY
Sbjct: 288  TPSDYDFIEDVKQQVSSSGNHNDVNGSNNNDNLLIDENKTPETVMY 333


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