BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016180
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ...   233   2e-59
ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   223   9e-57
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              223   9e-57
ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabido...   222   2e-56

>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 476

 Score =  233 bits (593), Expect = 2e-59
 Identities = 117/153 (76%), Positives = 131/153 (85%)
 Frame = +2

Query: 2   NKRLQTLLSLLEADEPKSGIIFVGEQSEKSKKAGNDPSTTLVINFLLTSYNKSSEILLLE 181
           N+R Q LLSLL+ D PKSGI+FVGEQSEKSKKAG+ P TTL+++FL TSY+  S+ILLLE
Sbjct: 317 NQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKAGHAPPTTLLVDFLETSYSDCSDILLLE 376

Query: 182 EDMNSQPMVFVLQEVRQGGGCLLVATDIAARGVDLPETTHIYNFDLPRSAVDYLHRAGRT 361
           EDMN       L EV+QGGG LLVATDIAARGVDLPETTHIYNF+LPR+AVDYLHRAGRT
Sbjct: 377 EDMNFNLRAASLSEVKQGGGYLLVATDIAARGVDLPETTHIYNFELPRTAVDYLHRAGRT 436

Query: 362 GRKPFSDEKCTVTNMITAEERFALQRFENELMF 460
           GRKPFSDEKC  TN+IT EERF LQR+ENELMF
Sbjct: 437 GRKPFSDEKCYATNIITPEERFVLQRYENELMF 469


>ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  229 bits (583), Expect = 2e-58
 Identities = 117/152 (76%), Positives = 128/152 (84%)
 Frame = +2

Query: 5   KRLQTLLSLLEADEPKSGIIFVGEQSEKSKKAGNDPSTTLVINFLLTSYNKSSEILLLEE 184
           +R QTLLSLL++D PKSGIIFVGEQSEKSKKAGN P T  +++FL TSY   SEILLLEE
Sbjct: 152 QRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPTIDLVDFLKTSYGDCSEILLLEE 211

Query: 185 DMNSQPMVFVLQEVRQGGGCLLVATDIAARGVDLPETTHIYNFDLPRSAVDYLHRAGRTG 364
           DMN       L EVRQGGG LLVATDIAARGVDLPE THIYNF+LPR+AVDYLHRAGRTG
Sbjct: 212 DMNFNSRAASLSEVRQGGGYLLVATDIAARGVDLPEITHIYNFNLPRTAVDYLHRAGRTG 271

Query: 365 RKPFSDEKCTVTNMITAEERFALQRFENELMF 460
           RKPFSDEKC VT++I  EERF LQR+ENELMF
Sbjct: 272 RKPFSDEKCNVTSIIMPEERFVLQRYENELMF 303


>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  223 bits (569), Expect = 9e-57
 Identities = 113/152 (74%), Positives = 126/152 (82%)
 Frame = +2

Query: 5   KRLQTLLSLLEADEPKSGIIFVGEQSEKSKKAGNDPSTTLVINFLLTSYNKSSEILLLEE 184
           +R QTLLSLL +D P+ GIIFVGEQSEKSKKAGN PS TL+I+FL TSY    +ILLLEE
Sbjct: 320 ERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLIDFLKTSYGGCPDILLLEE 379

Query: 185 DMNSQPMVFVLQEVRQGGGCLLVATDIAARGVDLPETTHIYNFDLPRSAVDYLHRAGRTG 364
           DMN       L EVRQ GG LL++TDIAARGVDLPETTHIYNFDLPR+ VDYLHRAGR  
Sbjct: 380 DMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNFDLPRTVVDYLHRAGRAA 439

Query: 365 RKPFSDEKCTVTNMITAEERFALQRFENELMF 460
           RKPFSD+KC VTN+IT+EERF LQR+ENELMF
Sbjct: 440 RKPFSDQKCCVTNIITSEERFVLQRYENELMF 471


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  223 bits (569), Expect = 9e-57
 Identities = 113/152 (74%), Positives = 126/152 (82%)
 Frame = +2

Query: 5   KRLQTLLSLLEADEPKSGIIFVGEQSEKSKKAGNDPSTTLVINFLLTSYNKSSEILLLEE 184
           +R QTLLSLL +D P+ GIIFVGEQSEKSKKAGN PS TL+I+FL TSY    +ILLLEE
Sbjct: 324 ERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLIDFLKTSYGGCPDILLLEE 383

Query: 185 DMNSQPMVFVLQEVRQGGGCLLVATDIAARGVDLPETTHIYNFDLPRSAVDYLHRAGRTG 364
           DMN       L EVRQ GG LL++TDIAARGVDLPETTHIYNFDLPR+ VDYLHRAGR  
Sbjct: 384 DMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNFDLPRTVVDYLHRAGRAA 443

Query: 365 RKPFSDEKCTVTNMITAEERFALQRFENELMF 460
           RKPFSD+KC VTN+IT+EERF LQR+ENELMF
Sbjct: 444 RKPFSDQKCCVTNIITSEERFVLQRYENELMF 475


>ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabidopsis thaliana]
           gi|108861900|sp|Q3E9C3.1|RH58_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic; Flags: Precursor
           gi|332005287|gb|AED92670.1| DEAD-box ATP-dependent RNA
           helicase 58 [Arabidopsis thaliana]
          Length = 472

 Score =  222 bits (566), Expect = 2e-56
 Identities = 110/149 (73%), Positives = 124/149 (83%)
 Frame = +2

Query: 14  QTLLSLLEADEPKSGIIFVGEQSEKSKKAGNDPSTTLVINFLLTSYNKSSEILLLEEDMN 193
           Q LL+LLE+D P+S IIFVGEQSEKSKKAGNDPSTTL++ FL TSY  S EILLLE DMN
Sbjct: 317 QVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMN 376

Query: 194 SQPMVFVLQEVRQGGGCLLVATDIAARGVDLPETTHIYNFDLPRSAVDYLHRAGRTGRKP 373
                  L E+RQGGG LLV+TDIAARG+DLPETTHI+NFDLP++  DYLHRAGR GRKP
Sbjct: 377 FNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKP 436

Query: 374 FSDEKCTVTNMITAEERFALQRFENELMF 460
           FSD KC V N+IT+EERF LQR+ENELMF
Sbjct: 437 FSDRKCIVANLITSEERFVLQRYENELMF 465