BLASTX nr result

ID: Coptis23_contig00016171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016171
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632932.1| PREDICTED: 60S ribosomal protein L7-4-like [...   136   2e-30
ref|XP_003632930.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   132   4e-29
ref|XP_003632929.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   132   4e-29
emb|CBI17892.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002262697.1| PREDICTED: 60S ribosomal protein L7-4 [Vitis...   132   4e-29

>ref|XP_003632932.1| PREDICTED: 60S ribosomal protein L7-4-like [Vitis vinifera]
           gi|297735811|emb|CBI18498.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/88 (72%), Positives = 77/88 (87%)
 Frame = +3

Query: 99  MGEEDIKGVAIVPESVLKKRKRSEEWALAKKQSFETQKKKNSENRKLIFKRAEQYAKEYS 278
           MGEED KG  ++PESVLKK+KR+EEW LAKKQ  E +KKKN++NRKLI+ RA+QYAKEY 
Sbjct: 1   MGEEDAKGGPVIPESVLKKQKRNEEWTLAKKQEVEAKKKKNADNRKLIYSRAKQYAKEYE 60

Query: 279 DKDKELVRLKREAKLKGGFYVPPEAKLL 362
           ++ KEL++LKREAKLKGGFYV PEAKLL
Sbjct: 61  EQQKELIQLKREAKLKGGFYVDPEAKLL 88


>ref|XP_003632930.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L7-4-like
           [Vitis vinifera]
          Length = 246

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/88 (70%), Positives = 74/88 (84%)
 Frame = +3

Query: 99  MGEEDIKGVAIVPESVLKKRKRSEEWALAKKQSFETQKKKNSENRKLIFKRAEQYAKEYS 278
           MGEE+ KG  ++PESVLKK+KRSEEW L KKQ  E +KKKN+ENRKLI+ RA+QYAKEY 
Sbjct: 1   MGEEEAKGGPVIPESVLKKQKRSEEWTLXKKQEVEAKKKKNAENRKLIYSRAKQYAKEYE 60

Query: 279 DKDKELVRLKREAKLKGGFYVPPEAKLL 362
           ++ KEL++LK EAKLKGGFYV PE KLL
Sbjct: 61  EQQKELIQLKHEAKLKGGFYVDPEVKLL 88


>ref|XP_003632929.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L7-4-like
           [Vitis vinifera]
          Length = 246

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/88 (70%), Positives = 74/88 (84%)
 Frame = +3

Query: 99  MGEEDIKGVAIVPESVLKKRKRSEEWALAKKQSFETQKKKNSENRKLIFKRAEQYAKEYS 278
           MGEE+ KG  ++PESVLKK+KRSEEW L KKQ  E +KKKN+ENRKLI+ RA+QYAKEY 
Sbjct: 1   MGEEEAKGGPVIPESVLKKQKRSEEWTLXKKQEVEAKKKKNAENRKLIYSRAKQYAKEYD 60

Query: 279 DKDKELVRLKREAKLKGGFYVPPEAKLL 362
           ++ KEL++LK EAKLKGGFYV PE KLL
Sbjct: 61  EQQKELIQLKHEAKLKGGFYVDPEVKLL 88


>emb|CBI17892.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/88 (75%), Positives = 76/88 (86%)
 Frame = +3

Query: 99  MGEEDIKGVAIVPESVLKKRKRSEEWALAKKQSFETQKKKNSENRKLIFKRAEQYAKEYS 278
           MG E++KGV +VPESVLKKRKRSEEWALAKKQ  E  KKKN+ NR LI+ RA+QYAKEY 
Sbjct: 1   MGGEEVKGV-VVPESVLKKRKRSEEWALAKKQELECTKKKNATNRTLIYVRAKQYAKEYD 59

Query: 279 DKDKELVRLKREAKLKGGFYVPPEAKLL 362
           ++ KEL++LKREAKLKGGFYV PEAKLL
Sbjct: 60  EQQKELIQLKREAKLKGGFYVSPEAKLL 87


>ref|XP_002262697.1| PREDICTED: 60S ribosomal protein L7-4 [Vitis vinifera]
          Length = 245

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/88 (75%), Positives = 76/88 (86%)
 Frame = +3

Query: 99  MGEEDIKGVAIVPESVLKKRKRSEEWALAKKQSFETQKKKNSENRKLIFKRAEQYAKEYS 278
           MG E++KGV +VPESVLKKRKRSEEWALAKKQ  E  KKKN+ NR LI+ RA+QYAKEY 
Sbjct: 1   MGGEEVKGV-VVPESVLKKRKRSEEWALAKKQELECTKKKNATNRTLIYVRAKQYAKEYD 59

Query: 279 DKDKELVRLKREAKLKGGFYVPPEAKLL 362
           ++ KEL++LKREAKLKGGFYV PEAKLL
Sbjct: 60  EQQKELIQLKREAKLKGGFYVSPEAKLL 87


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