BLASTX nr result

ID: Coptis23_contig00016170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016170
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159939.1| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ doma...   108   7e-22
ref|XP_004143897.1| PREDICTED: BTB/POZ domain-containing protein...   108   7e-22
dbj|BAF62469.1| hypothetical protein [Nicotiana tabacum]              105   6e-21
ref|XP_003631414.1| PREDICTED: BTB/POZ domain-containing protein...    97   2e-18
ref|XP_003525389.1| PREDICTED: BTB/POZ domain-containing protein...    96   3e-18

>ref|XP_004159939.1| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein
           At5g41330-like [Cucumis sativus]
          Length = 476

 Score =  108 bits (269), Expect = 7e-22
 Identities = 55/97 (56%), Positives = 73/97 (75%)
 Frame = -3

Query: 292 LIRKKPDIITINVGGXXXXXXXXXXXLAGSNSLLYTISLSSSNIVPFIDRDPEIFSILLS 113
           L+  + +I+T+NVGG           +AGS+SLL TIS SS ++VPFIDRDP++FS++LS
Sbjct: 19  LLNPESNIVTVNVGGHLFQTTKQTLAIAGSSSLLSTISDSSQSLVPFIDRDPDLFSLILS 78

Query: 112 LLRTSNLPSKAKTIDLQDLIFEAEFYGLGELLVSSLS 2
           LLRT  LPSKAK  DLQDLI E++FYG+  LL++SLS
Sbjct: 79  LLRTGYLPSKAKAFDLQDLISESQFYGVESLLINSLS 115


>ref|XP_004143897.1| PREDICTED: BTB/POZ domain-containing protein At5g41330-like
           [Cucumis sativus]
          Length = 476

 Score =  108 bits (269), Expect = 7e-22
 Identities = 55/97 (56%), Positives = 73/97 (75%)
 Frame = -3

Query: 292 LIRKKPDIITINVGGXXXXXXXXXXXLAGSNSLLYTISLSSSNIVPFIDRDPEIFSILLS 113
           L+  + +I+T+NVGG           +AGS+SLL TIS SS ++VPFIDRDP++FS++LS
Sbjct: 19  LLNPESNIVTVNVGGHLFQTTKQTLAIAGSSSLLSTISDSSQSLVPFIDRDPDLFSLILS 78

Query: 112 LLRTSNLPSKAKTIDLQDLIFEAEFYGLGELLVSSLS 2
           LLRT  LPSKAK  DLQDLI E++FYG+  LL++SLS
Sbjct: 79  LLRTGYLPSKAKAFDLQDLISESQFYGVESLLINSLS 115


>dbj|BAF62469.1| hypothetical protein [Nicotiana tabacum]
          Length = 463

 Score =  105 bits (261), Expect = 6e-21
 Identities = 58/107 (54%), Positives = 72/107 (67%)
 Frame = -3

Query: 322 PTQFQSSSNGLIRKKPDIITINVGGXXXXXXXXXXXLAGSNSLLYTISLSSSNIVPFIDR 143
           P  +  S N  I    +IITI+VGG            +GS SLL  I+  +  ++PFIDR
Sbjct: 9   PLSYNFSRNS-IDSASNIITIDVGGQLFQTTKQTLKQSGSKSLLSEITNFNDGVLPFIDR 67

Query: 142 DPEIFSILLSLLRTSNLPSKAKTIDLQDLIFEAEFYGLGELLVSSLS 2
           DPEIFSILLSLLRT NLPSKAKT D+QDLIFE++FYG+  LL++S S
Sbjct: 68  DPEIFSILLSLLRTGNLPSKAKTFDIQDLIFESQFYGVEHLLLNSQS 114


>ref|XP_003631414.1| PREDICTED: BTB/POZ domain-containing protein At5g41330-like [Vitis
           vinifera]
          Length = 464

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 55/98 (56%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
 Frame = -3

Query: 286 RKKPDIITINVGGXXXXXXXXXXXLAGSNSL---LYTISLSSSNIVPFIDRDPEIFSILL 116
           RK+ +I+TI+VGG           LAG  SL   +  +  S+    PFIDRDP++FSILL
Sbjct: 13  RKESNIVTIDVGGQIFQTTKQTLTLAGPKSLFSKILDLPASAQIGFPFIDRDPDLFSILL 72

Query: 115 SLLRTSNLPSKAKTIDLQDLIFEAEFYGLGELLVSSLS 2
           SLLRT NLPSKAK +DLQDL  EA+FYG+  LLVSSLS
Sbjct: 73  SLLRTGNLPSKAKAVDLQDLFSEAKFYGIESLLVSSLS 110


>ref|XP_003525389.1| PREDICTED: BTB/POZ domain-containing protein At5g41330-like
           [Glycine max]
          Length = 458

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = -3

Query: 325 MPTQFQSSSNGLIRKKPDIITINVGGXXXXXXXXXXXLAGSNSLLYTISLSSSNI-VPFI 149
           MP    S   G  +   DI++I+VGG            AG  +    I+  SS +  PF+
Sbjct: 1   MPPFAGSEPVGFPKPDSDIVSIDVGGQLFQTTKQTLTSAGPKTFFSRIAAESSGLHTPFL 60

Query: 148 DRDPEIFSILLSLLRTSNLPSKAKTIDLQDLIFEAEFYGLGELLVSSLS 2
           DRDP++FS+LLSLLRT NLPSKAKT DLQDL  E++FYG+  LLV+SLS
Sbjct: 61  DRDPDLFSLLLSLLRTGNLPSKAKTFDLQDLTIESKFYGIESLLVNSLS 109


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