BLASTX nr result

ID: Coptis23_contig00016134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016134
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150112.1| PREDICTED: uncharacterized protein LOC101217...    81   8e-14
ref|XP_003545131.1| PREDICTED: uncharacterized protein LOC100797...    76   3e-12
ref|NP_568814.2| DTW domain-containing protein [Arabidopsis thal...    74   9e-12
gb|AAM65331.1| unknown [Arabidopsis thaliana]                          74   9e-12
ref|XP_002864362.1| DTW domain-containing protein [Arabidopsis l...    74   2e-11

>ref|XP_004150112.1| PREDICTED: uncharacterized protein LOC101217537 [Cucumis sativus]
           gi|449476960|ref|XP_004154887.1| PREDICTED:
           uncharacterized protein LOC101226953 [Cucumis sativus]
          Length = 374

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/98 (45%), Positives = 60/98 (61%)
 Frame = +3

Query: 3   SRFKSPVYNNPIAVTVLQHDHEKNHPLNSTRIVRLGLKNVNIATCSDVHFEAKFLIKLLA 182
           SRF+S    N + V +LQH  EKNHPLNS RIV+LGLKNV IAT SDV+FEA+F I+L  
Sbjct: 70  SRFRSSSVENSVGVIILQHSLEKNHPLNSARIVKLGLKNVEIATVSDVNFEARFTIRLPE 129

Query: 183 LGSVGERSNNKNELVDTGCNGVPQEPIFESDAGNVCDE 296
             S  +  +   E      +G  Q+P  +   G++ D+
Sbjct: 130 PNSAAQNLDPDIECSFRNGHGTIQKPQIQD--GSIVDK 165


>ref|XP_003545131.1| PREDICTED: uncharacterized protein LOC100797499 [Glycine max]
          Length = 423

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 56/146 (38%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   SRFKSPVYNNPIAVTVLQHDHEKNHPLNSTRIVRLGLKNVNIATCSDVHFEAKFLIKLLA 182
           SR  +P   N + VT+LQH  E+ HPLNSTRI  LGLKN+ +AT SDV+FEA+FLI+LL 
Sbjct: 61  SRILTPGLQNSVHVTILQHSLERKHPLNSTRIAILGLKNLTVATVSDVNFEARFLIRLLD 120

Query: 183 LG-SVGERSNNKNELVDTGC--NGVPQEPIFESDAGNVCDEYITHVDISRNNEKILDFEP 353
                G   N    L    C   G  Q+ + E D+  +  +      +  +   +LD   
Sbjct: 121 PNYHSGHAGNEPTALFSRQCWEIGDTQKLLSEKDSNLIDTDSAGKCGLRNDVGDVLD--- 177

Query: 354 SQGFGEKKKAGVNTTDGFVNDVVDEK 431
           S    E  K  V+ +DG V D   EK
Sbjct: 178 SASNAEVVKQ-VSISDGAVMDDEVEK 202


>ref|NP_568814.2| DTW domain-containing protein [Arabidopsis thaliana]
           gi|9758268|dbj|BAB08767.1| unnamed protein product
           [Arabidopsis thaliana] gi|15450589|gb|AAK96566.1|
           AT5g54880/MBG8_15 [Arabidopsis thaliana]
           gi|24797048|gb|AAN64536.1| At5g54880/MBG8_15
           [Arabidopsis thaliana] gi|332009169|gb|AED96552.1| DTW
           domain-containing protein [Arabidopsis thaliana]
          Length = 394

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/61 (52%), Positives = 46/61 (75%)
 Frame = +3

Query: 6   RFKSPVYNNPIAVTVLQHDHEKNHPLNSTRIVRLGLKNVNIATCSDVHFEAKFLIKLLAL 185
           + +SP ++N +++T+LQH  E+ H LNSTRI RLGLKNV + T  DVH EA+FLI+++  
Sbjct: 62  KMRSPCFDNQVSITILQHSLERKHALNSTRIARLGLKNVGVTTVFDVHDEAEFLIRVIGS 121

Query: 186 G 188
           G
Sbjct: 122 G 122


>gb|AAM65331.1| unknown [Arabidopsis thaliana]
          Length = 354

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/61 (52%), Positives = 46/61 (75%)
 Frame = +3

Query: 6   RFKSPVYNNPIAVTVLQHDHEKNHPLNSTRIVRLGLKNVNIATCSDVHFEAKFLIKLLAL 185
           + +SP ++N +++T+LQH  E+ H LNSTRI RLGLKNV + T  DVH EA+FLI+++  
Sbjct: 22  KMRSPCFDNQVSITILQHSLERKHALNSTRIARLGLKNVGVTTVFDVHDEAEFLIRVIGS 81

Query: 186 G 188
           G
Sbjct: 82  G 82


>ref|XP_002864362.1| DTW domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310197|gb|EFH40621.1| DTW domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 402

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/61 (52%), Positives = 46/61 (75%)
 Frame = +3

Query: 6   RFKSPVYNNPIAVTVLQHDHEKNHPLNSTRIVRLGLKNVNIATCSDVHFEAKFLIKLLAL 185
           + +SP ++N ++VT+LQH  E+ H LNSTRI RLGLKNV + T  DVH EA+F+I+++  
Sbjct: 66  KMRSPCFDNQVSVTILQHSLERKHALNSTRIARLGLKNVGVTTVFDVHDEAEFVIRVIGS 125

Query: 186 G 188
           G
Sbjct: 126 G 126


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