BLASTX nr result

ID: Coptis23_contig00016115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016115
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513663.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_003536452.1| PREDICTED: uncharacterized protein LOC100780...    54   1e-05
gb|ACU23182.1| unknown [Glycine max]                                   54   1e-05
gb|ACU23157.1| unknown [Glycine max]                                   54   1e-05

>ref|XP_002513663.1| conserved hypothetical protein [Ricinus communis]
           gi|223547571|gb|EEF49066.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
 Frame = -1

Query: 405 MATKSFRVIQDENMDVRYGGAAFGKGTNVSKPMKKAGLGGLKPLSNITNSGKPTRPEVLK 226
           MA+++  V+QD+N+++ +   + G  TNVSK  +K  LGG  PL +++NS KP+  +  K
Sbjct: 1   MASRAGGVVQDQNLNIHFNETSVGWKTNVSKAPRKGVLGGRTPLGDLSNSLKPSLNQASK 60

Query: 225 KNIPERLS--DGEVQCPQNSQKKLLSQGASVSRKSNVPDSQKKGGRSDRKALADISNS-- 58
           K      S  + E+   QN+         +   +S    +  K   + RK L+DISNS  
Sbjct: 61  KQNSSIFSFTEKEIGASQNALD-------ATKNRSTCKKASGKAHTTGRKPLSDISNSGK 113

Query: 57  ---RQITTKNLPKKLDNIAEE 4
               + + ++   KL  +AEE
Sbjct: 114 QNRNEGSKRSYNAKLSVVAEE 134


>ref|XP_003536452.1| PREDICTED: uncharacterized protein LOC100780230 [Glycine max]
          Length = 256

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
 Frame = -1

Query: 405 MATKSFRVIQDENMDVRYGGAAFGKGTNVSKPMKKAGLGGLKPLSNITNSGKPTRPEVLK 226
           MAT++ R+ Q++N++V   G     G       +K G GG KPL +++N+G        K
Sbjct: 1   MATRTGRLFQNQNLNVHVNGGGAVSGKADLTGQRKVGAGGRKPLGDLSNAGNLINQFDGK 60

Query: 225 KNIPERLSDGEVQCPQNSQKKLLSQGASVSRKSNVPDSQKKGGRSDRKALADISNS---- 58
           K +   L+ G+      SQ   L +  ++     +P S+K   R  RK L+DISNS    
Sbjct: 61  KALDGSLNTGKPSA-SVSQAPKLHKSKNLESDKRIPASEKLLTRG-RKVLSDISNSGKPQ 118

Query: 57  -RQITTKNLPKKLDN------IAEEQ 1
             +I  K   K ++       IAEEQ
Sbjct: 119 VPEIKNKKTLKPIEESLPPSAIAEEQ 144


>gb|ACU23182.1| unknown [Glycine max]
          Length = 256

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
 Frame = -1

Query: 405 MATKSFRVIQDENMDVRYGGAAFGKGTNVSKPMKKAGLGGLKPLSNITNSGKPTRPEVLK 226
           MAT++ R+ Q++N++V   G     G       +K G GG KPL +++N+G        K
Sbjct: 1   MATRTGRLFQNQNLNVHVNGGGAVSGKADLTGQRKVGAGGRKPLGDLSNAGNLINQFDGK 60

Query: 225 KNIPERLSDGEVQCPQNSQKKLLSQGASVSRKSNVPDSQKKGGRSDRKALADISNS---- 58
           K +   L+ G+      SQ   L +  ++     +P S+K   R  RK L+DISNS    
Sbjct: 61  KALDGSLNTGKPSA-SVSQAPKLHKSKNLESDKRIPASEKLLTRG-RKVLSDISNSGKPQ 118

Query: 57  -RQITTKNLPKKLDN------IAEEQ 1
             +I  K   K ++       IAEEQ
Sbjct: 119 VPEIKNKKTLKPIEESLPPSAIAEEQ 144


>gb|ACU23157.1| unknown [Glycine max]
          Length = 256

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
 Frame = -1

Query: 405 MATKSFRVIQDENMDVRYGGAAFGKGTNVSKPMKKAGLGGLKPLSNITNSGKPTRPEVLK 226
           MAT++ R+ Q++N++V   G     G       +K G GG KPL +++N+G        K
Sbjct: 1   MATRTGRLFQNQNLNVHVNGGGAVSGKADLTGQRKVGAGGRKPLGDLSNAGNLINQFDGK 60

Query: 225 KNIPERLSDGEVQCPQNSQKKLLSQGASVSRKSNVPDSQKKGGRSDRKALADISNS---- 58
           K +   L+ G+      SQ   L +  ++     +P S+K   R  RK L+DISNS    
Sbjct: 61  KALDGSLNTGKPSA-SVSQAPKLHKSKNLESDKRIPASEKLLTRG-RKVLSDISNSGKPQ 118

Query: 57  -RQITTKNLPKKLDN------IAEEQ 1
             +I  K   K ++       IAEEQ
Sbjct: 119 VPEIKNKKTLKPIEESLPPSAIAEEQ 144


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