BLASTX nr result

ID: Coptis23_contig00016108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016108
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264302.1| PREDICTED: zinc finger protein ZAT10-like [V...   229   6e-58
emb|CAN61204.1| hypothetical protein VITISV_013668 [Vitis vinifera]   229   6e-58
ref|XP_002285260.1| PREDICTED: zinc finger protein ZAT10-like [V...   218   2e-54
emb|CAN61394.1| hypothetical protein VITISV_013327 [Vitis vinifera]   218   2e-54
emb|CAF74935.1| zinc finger DNA-binding protein [Catharanthus ro...   215   1e-53

>ref|XP_002264302.1| PREDICTED: zinc finger protein ZAT10-like [Vitis vinifera]
          Length = 235

 Score =  229 bits (585), Expect = 6e-58
 Identities = 132/234 (56%), Positives = 147/234 (62%), Gaps = 14/234 (5%)
 Frame = -2

Query: 815 MALETLNSPTTLAPTFHTHNDMDIHCLEPWMXXXXXXXXXSENNSPTEEEYLALCLIMLA 636
           MALE LNSPTT++PTF    + ++H LEPW           EN S TEEEYLALCLIMLA
Sbjct: 1   MALEALNSPTTMSPTFK-FEEAELHSLEPWTKRKRSRRPRFENPS-TEEEYLALCLIMLA 58

Query: 635 RGGTTTDMISP------PQPPILKLNYKCSVCNKAFSSYQALGGHKASHRKL----AVPS 486
           RGG TT   SP      P PP L L+YKC+VCNKAFSSYQALGGHKASHRK     A  S
Sbjct: 59  RGGATTREESPMPLRAVPPPPPLNLSYKCNVCNKAFSSYQALGGHKASHRKSSTDDASTS 118

Query: 485 DEHQXXXXXXXXXXSGRTHECSVCHKCFPSGQALGGHKRCHYDGGSSGLTSSEGAGSTTT 306
                         SG+THECS+CH+ FP+GQALGGHKRCHYDGGSSG+TSSEGA S   
Sbjct: 119 ANTTTTAGSSALNPSGKTHECSICHRTFPTGQALGGHKRCHYDGGSSGVTSSEGAVS--- 175

Query: 305 HSHSQRDFDLNLPAPQE----LXXXXXXXXXXXGDEEVESPHPMKKSRLSIPSG 156
            SHS RDFDLNLPA  +                 ++EVESP P KK R   P G
Sbjct: 176 -SHSHRDFDLNLPALPDFWPRFRVDGGRKSQTGVEQEVESPLPAKKPRFLFPVG 228


>emb|CAN61204.1| hypothetical protein VITISV_013668 [Vitis vinifera]
          Length = 324

 Score =  229 bits (585), Expect = 6e-58
 Identities = 132/234 (56%), Positives = 147/234 (62%), Gaps = 14/234 (5%)
 Frame = -2

Query: 815 MALETLNSPTTLAPTFHTHNDMDIHCLEPWMXXXXXXXXXSENNSPTEEEYLALCLIMLA 636
           MALE LNSPTT++PTF    + ++H LEPW           EN S TEEEYLALCLIMLA
Sbjct: 90  MALEALNSPTTMSPTFK-FEEAELHSLEPWTKRKRSRRPRFENPS-TEEEYLALCLIMLA 147

Query: 635 RGGTTTDMISP------PQPPILKLNYKCSVCNKAFSSYQALGGHKASHRKL----AVPS 486
           RGG TT   SP      P PP L L+YKC+VCNKAFSSYQALGGHKASHRK     A  S
Sbjct: 148 RGGATTREESPMPLRAVPPPPPLNLSYKCNVCNKAFSSYQALGGHKASHRKSSTDDASTS 207

Query: 485 DEHQXXXXXXXXXXSGRTHECSVCHKCFPSGQALGGHKRCHYDGGSSGLTSSEGAGSTTT 306
                         SG+THECS+CH+ FP+GQALGGHKRCHYDGGSSG+TSSEGA S   
Sbjct: 208 ANTTTTAGSSALNPSGKTHECSICHRTFPTGQALGGHKRCHYDGGSSGVTSSEGAVS--- 264

Query: 305 HSHSQRDFDLNLPAPQE----LXXXXXXXXXXXGDEEVESPHPMKKSRLSIPSG 156
            SHS RDFDLNLPA  +                 ++EVESP P KK R   P G
Sbjct: 265 -SHSHRDFDLNLPALPDFWPRFRVDGGRKSQTGVEQEVESPLPAKKPRFLFPVG 317


>ref|XP_002285260.1| PREDICTED: zinc finger protein ZAT10-like [Vitis vinifera]
          Length = 233

 Score =  218 bits (555), Expect = 2e-54
 Identities = 128/231 (55%), Positives = 143/231 (61%), Gaps = 14/231 (6%)
 Frame = -2

Query: 815 MALETLNSPTTLAPTFHTHNDMDIHCLEPWMXXXXXXXXXSENNSPTEEEYLALCLIMLA 636
           MALE LNSPTT  P+FH +    +H LE W           +N  PTEEEYLALCLIMLA
Sbjct: 1   MALEALNSPTTPTPSFH-YEQPSLHSLESWAKRKRSKRPRFDNQ-PTEEEYLALCLIMLA 58

Query: 635 RGGTTTDMISPPQ----PPIL-----KLNYKCSVCNKAFSSYQALGGHKASHRKLAVPSD 483
           RGG     +S  +    PP L     KL YKCSVCNKAF+SYQALGGHKASHRK +   D
Sbjct: 59  RGGAAASTVSHRRHLSPPPALQVEAPKLTYKCSVCNKAFASYQALGGHKASHRKQSGSDD 118

Query: 482 EHQXXXXXXXXXXS--GRTHECSVCHKCFPSGQALGGHKRCHYDGG---SSGLTSSEGAG 318
                        +  GRTHECS+CHK FP+GQALGGHKRCHY+GG   SSG+TSSEG G
Sbjct: 119 LSASITTTSTAAAASGGRTHECSICHKTFPTGQALGGHKRCHYEGGASVSSGVTSSEGVG 178

Query: 317 STTTHSHSQRDFDLNLPAPQELXXXXXXXXXXXGDEEVESPHPMKKSRLSI 165
           ST    HS RDFDLNLPA  EL            D+EVESP P KK RL +
Sbjct: 179 ST----HSHRDFDLNLPAFPEL----WSARRFPVDDEVESPLPTKKPRLQM 221


>emb|CAN61394.1| hypothetical protein VITISV_013327 [Vitis vinifera]
          Length = 233

 Score =  218 bits (555), Expect = 2e-54
 Identities = 128/231 (55%), Positives = 143/231 (61%), Gaps = 14/231 (6%)
 Frame = -2

Query: 815 MALETLNSPTTLAPTFHTHNDMDIHCLEPWMXXXXXXXXXSENNSPTEEEYLALCLIMLA 636
           MALE LNSPTT  P+FH +    +H LE W           +N  PTEEEYLALCLIMLA
Sbjct: 1   MALEALNSPTTPTPSFH-YEQPSLHSLESWAKRKRSKRPRFDNQ-PTEEEYLALCLIMLA 58

Query: 635 RGGTTTDMISPPQ----PPIL-----KLNYKCSVCNKAFSSYQALGGHKASHRKLAVPSD 483
           RGG     +S  +    PP L     KL YKCSVCNKAF+SYQALGGHKASHRK +   D
Sbjct: 59  RGGAAASTVSHRRHLSPPPALQVEAPKLTYKCSVCNKAFASYQALGGHKASHRKQSGSDD 118

Query: 482 EHQXXXXXXXXXXS--GRTHECSVCHKCFPSGQALGGHKRCHYDGG---SSGLTSSEGAG 318
                        +  GRTHECS+CHK FP+GQALGGHKRCHY+GG   SSG+TSSEG G
Sbjct: 119 LSASITTTSTAAAASGGRTHECSICHKTFPTGQALGGHKRCHYEGGASVSSGVTSSEGVG 178

Query: 317 STTTHSHSQRDFDLNLPAPQELXXXXXXXXXXXGDEEVESPHPMKKSRLSI 165
           ST    HS RDFDLNLPA  EL            D+EVESP P KK RL +
Sbjct: 179 ST----HSHRDFDLNLPAFPEL----WSARRFPVDDEVESPLPTKKPRLQM 221


>emb|CAF74935.1| zinc finger DNA-binding protein [Catharanthus roseus]
          Length = 259

 Score =  215 bits (548), Expect = 1e-53
 Identities = 133/259 (51%), Positives = 149/259 (57%), Gaps = 41/259 (15%)
 Frame = -2

Query: 815 MALETLNSPTTLAPTFHTHNDMDIHCLE-PWMXXXXXXXXXS---------ENNSPTEEE 666
           MALE LNSPTT  P F   N   +  L+ PW          S         +   PTEEE
Sbjct: 1   MALEALNSPTTPTPVFQYENAATLRYLDQPWAKGKRSKRPRSVEPPPPQHQQQQQPTEEE 60

Query: 665 YLALCLIMLARGG----TTTDMISPPQ-----------PPILKLNYKCSVCNKAFSSYQA 531
           YLALCLIMLARGG    TT  +  PPQ           PP  KL YKCSVC+KAFSSYQA
Sbjct: 61  YLALCLIMLARGGAPSTTTLPLPPPPQQHNIPSSSSSDPP--KLLYKCSVCDKAFSSYQA 118

Query: 530 LGGHKASHRKLAVPS------DEHQXXXXXXXXXXSGRTHECSVCHKCFPSGQALGGHKR 369
           LGGHKASHRKL+  S                    +GRTHECS+CHKCFPSGQALGGHKR
Sbjct: 119 LGGHKASHRKLSTASAGGGDDQSTTSTSTTTAAAATGRTHECSICHKCFPSGQALGGHKR 178

Query: 368 CHYDGG----------SSGLTSSEGAGSTTTHSHSQRDFDLNLPAPQELXXXXXXXXXXX 219
           CHY+GG          +SG+TSSEG GST THS+  RDFDLNLPA  E            
Sbjct: 179 CHYEGGAGAVGSTGNAASGVTSSEGMGSTNTHSN--RDFDLNLPALPEF-----WLAAAA 231

Query: 218 GDEEVESPHPMKKSRLSIP 162
           GD+EV SPHP K+SR ++P
Sbjct: 232 GDDEVSSPHPAKRSRFALP 250


Top