BLASTX nr result

ID: Coptis23_contig00016094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016094
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine...   118   6e-25
ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putati...   112   3e-23
ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR...   106   2e-21
emb|CBI32004.3| unnamed protein product [Vitis vinifera]              106   2e-21

>ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g14390-like [Cucumis sativus]
           gi|449478441|ref|XP_004155319.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g14390-like [Cucumis sativus]
          Length = 728

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/102 (58%), Positives = 70/102 (68%), Gaps = 8/102 (7%)
 Frame = +1

Query: 13  FLLQLLIIVLVCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNLCYLPPSPSLTI 192
           F     I  ++ P    QL PSE+RILF++Q+LLEYP AFQGW+NWTN CYLPPSPSL I
Sbjct: 10  FWFPAFIFAVIFPVSTGQLPPSETRILFEIQKLLEYPVAFQGWSNWTNFCYLPPSPSLKI 69

Query: 193 VCSGNHITELTVIGNKTT--------SPYSLSSKAGGGNSFS 294
           VCSGNHITELTVIGNK++        S  S+ S     NSFS
Sbjct: 70  VCSGNHITELTVIGNKSSPSKAPKSVSVSSIPSPQTLSNSFS 111


>ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|222833817|gb|EEE72294.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/85 (62%), Positives = 63/85 (74%)
 Frame = +1

Query: 13  FLLQLLIIVLVCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNLCYLPPSPSLTI 192
           F     +IV+       QL PSE+RILF+VQQLLEYP   QGWNNWTN CYLPPSPSL +
Sbjct: 10  FAALFTLIVMQVSISRGQLAPSETRILFQVQQLLEYPQVLQGWNNWTNFCYLPPSPSLKV 69

Query: 193 VCSGNHITELTVIGNKTTSPYSLSS 267
           VCS +H+TELTV+GNK++S  S SS
Sbjct: 70  VCSNSHVTELTVVGNKSSSSASPSS 94


>ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223540615|gb|EEF42178.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 749

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/95 (57%), Positives = 68/95 (71%)
 Frame = +1

Query: 16  LLQLLIIVLVCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNLCYLPPSPSLTIV 195
           LL LLI +++ P  + QL+PSE+RILF+VQ+LLEYP   Q W NWTN C+LPPSPSL IV
Sbjct: 11  LLSLLIPIILAPVSVGQLSPSETRILFQVQKLLEYPQVLQRWTNWTNFCWLPPSPSLKIV 70

Query: 196 CSGNHITELTVIGNKTTSPYSLSSKAGGGNSFSTS 300
           CS  H+TELTVIGN+T+   S   K    N+F  S
Sbjct: 71  CSNGHVTELTVIGNRTSP--SQIPKPINSNNFQVS 103


>ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At1g14390 [Vitis
           vinifera]
          Length = 746

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/77 (62%), Positives = 59/77 (76%)
 Frame = +1

Query: 28  LIIVLVCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNLCYLPPSPSLTIVCSGN 207
           L  V++ P  + QLTP+E RIL +VQQLLEYP A QGWNNWT+ CYLP SPSL IVC+ N
Sbjct: 11  LFSVIIFPVSMGQLTPTEGRILLQVQQLLEYPEALQGWNNWTSFCYLPHSPSLKIVCTDN 70

Query: 208 HITELTVIGNKTTSPYS 258
            +TELT+IGNK++   S
Sbjct: 71  RVTELTIIGNKSSPSVS 87


>emb|CBI32004.3| unnamed protein product [Vitis vinifera]
          Length = 720

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +1

Query: 28  LIIVLVCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNLCYLPPSPSLTIVCSGN 207
           L  V++ P  + QLTP+E RIL +VQQLLEYP A QGWNNWT+ CYLP SPSL IVC+ N
Sbjct: 11  LFSVIIFPVSMGQLTPTEGRILLQVQQLLEYPEALQGWNNWTSFCYLPHSPSLKIVCTDN 70

Query: 208 HITELTVIGNKTT-SPYSLSS 267
            +TELT+IGNK++ S +S+ +
Sbjct: 71  RVTELTIIGNKSSPSKFSIDA 91


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