BLASTX nr result

ID: Coptis23_contig00016086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016086
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera]   343   6e-92
ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-contai...   342   1e-91
ref|XP_003590173.1| TPR repeat-containing protein, putative [Med...   342   1e-91
ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putat...   341   2e-91
ref|XP_002300731.1| predicted protein [Populus trichocarpa] gi|2...   340   4e-91

>emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera]
          Length = 799

 Score =  343 bits (879), Expect = 6e-92
 Identities = 176/292 (60%), Positives = 215/292 (73%)
 Frame = -2

Query: 1111 VVEPSNFKRGYEETTSREDLANAL*IRAFQRLTRLGFCHVDFLMKEISEMKVPVSYARTV 932
            +VEPS FK   E+T  R +LAN L IRAFQR+TRL  C VD L KE++E  VPVSY+   
Sbjct: 504  IVEPSKFKXVGEKTALRPELANTLEIRAFQRITRLRGCDVDLLKKEMTENDVPVSYSGGG 563

Query: 931  GLEKYVRESALEAILRNLLHFLKPETFQGAVKAINKRILSVLNSWESSKVDLGMLCALLA 752
              EK +R+  LE ILR LL FLKPETFQGAVKAIN+RILSVL+   S +VDLGM  ++LA
Sbjct: 564  VPEKSIRKPNLEVILRRLLQFLKPETFQGAVKAINERILSVLDETGSGRVDLGMFFSVLA 623

Query: 751  PICSGPPEQRKRTVFDALLWRYVGEGSSVVKKVDAMRYIELLRAIYRPSQSTNRTSEFYG 572
            PIC G P++RKR  +DALLWR V EGS+ ++K DA++YI+LLRAIY PS   +   E +G
Sbjct: 624  PICGGSPDKRKRVAYDALLWRPVNEGSAQIRKADALKYIKLLRAIYIPSHGVSEMLEVHG 683

Query: 571  EVDVSTVSFSKFL*MFDNPDCGFGIMDTLVNLENGDTIRYCNFSCSVCHYLITGSCFKET 392
            E DVS VS S+FL MFD+PD GFGIM +LV LE GD  R+  ++CSVC Y I GS FKE 
Sbjct: 684  EADVSMVSLSEFLLMFDDPDWGFGIMSSLVKLETGDRTRHGRYACSVCRYPIIGSRFKEM 743

Query: 391  KSHFNLCSKCYSEGKVPAAIKSVECSFKEYGNEAEAIKDKCTILNLHSRSCS 236
            KSHF+LC++CYSEGKVP+  K  E  FKEYG+E+EA+KDKC   NL S+S S
Sbjct: 744  KSHFSLCNQCYSEGKVPSTFKQEEYRFKEYGSESEAMKDKCLCFNLQSKSSS 795


>ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-containing protein
            At1g05150-like [Vitis vinifera]
          Length = 799

 Score =  342 bits (877), Expect = 1e-91
 Identities = 176/292 (60%), Positives = 215/292 (73%)
 Frame = -2

Query: 1111 VVEPSNFKRGYEETTSREDLANAL*IRAFQRLTRLGFCHVDFLMKEISEMKVPVSYARTV 932
            +VEPS FK   E+T  R +LAN L IRAFQR+TRL  C VD L KE++E  VPVSY+   
Sbjct: 504  IVEPSKFKIVGEKTALRPELANTLEIRAFQRITRLRGCDVDLLKKEMTENDVPVSYSGGG 563

Query: 931  GLEKYVRESALEAILRNLLHFLKPETFQGAVKAINKRILSVLNSWESSKVDLGMLCALLA 752
              EK +R+  LE ILR LL FLKPETFQGAVKAIN+RILSVL+   S +VDLGM  ++LA
Sbjct: 564  VPEKSIRKPNLEVILRRLLQFLKPETFQGAVKAINERILSVLDETGSGRVDLGMFFSVLA 623

Query: 751  PICSGPPEQRKRTVFDALLWRYVGEGSSVVKKVDAMRYIELLRAIYRPSQSTNRTSEFYG 572
            PIC G P++RKR  +DALLWR V EGS+ ++K DA++YI+LLRAIY PS   +   E +G
Sbjct: 624  PICGGSPDKRKRVAYDALLWRPVNEGSAQIRKADALKYIKLLRAIYIPSHGVSEMLEVHG 683

Query: 571  EVDVSTVSFSKFL*MFDNPDCGFGIMDTLVNLENGDTIRYCNFSCSVCHYLITGSCFKET 392
            E DVS VS S+FL MFD+PD GFGIM +LV LE GD  R+  ++CSVC Y I GS FKE 
Sbjct: 684  EADVSMVSLSEFLLMFDDPDWGFGIMSSLVKLETGDRTRHGRYACSVCRYPIIGSRFKEM 743

Query: 391  KSHFNLCSKCYSEGKVPAAIKSVECSFKEYGNEAEAIKDKCTILNLHSRSCS 236
            KSHF+LC++CYSEGKVP+  K  E  FKEYG+E+EA+KDKC   NL S+S S
Sbjct: 744  KSHFSLCNQCYSEGKVPSTFKQEEYRFKEYGSESEAMKDKCLCFNLQSKSSS 795


>ref|XP_003590173.1| TPR repeat-containing protein, putative [Medicago truncatula]
            gi|355479221|gb|AES60424.1| TPR repeat-containing
            protein, putative [Medicago truncatula]
          Length = 832

 Score =  342 bits (877), Expect = 1e-91
 Identities = 177/290 (61%), Positives = 214/290 (73%)
 Frame = -2

Query: 1111 VVEPSNFKRGYEETTSREDLANAL*IRAFQRLTRLGFCHVDFLMKEISEMKVPVSYARTV 932
            +VEPS FK   ++TT R++LA+AL IRA Q++ RL  C+V+ L KE+SE  VPVSY+ T 
Sbjct: 508  IVEPSKFKTVGDKTTVRQELASALQIRALQKVARLSRCNVELLKKEMSEHDVPVSYSGTG 567

Query: 931  GLEKYVRESALEAILRNLLHFLKPETFQGAVKAINKRILSVLNSWESSKVDLGMLCALLA 752
              EK +R+  LE ILR LL FLKP+TFQGAVKAIN+RILSVL+   S ++DLGM  A+LA
Sbjct: 568  VPEKSIRKPNLEEILRKLLSFLKPDTFQGAVKAINERILSVLDENGSGRLDLGMFFAILA 627

Query: 751  PICSGPPEQRKRTVFDALLWRYVGEGSSVVKKVDAMRYIELLRAIYRPSQSTNRTSEFYG 572
            PIC GPPE+RKR  FDALLWR + E  + +KKVDA RYI+LLRA+Y PSQ  +   E  G
Sbjct: 628  PICGGPPERRKRIAFDALLWRPMNEDGANLKKVDATRYIKLLRAVYVPSQGVSELMEVRG 687

Query: 571  EVDVSTVSFSKFL*MFDNPDCGFGIMDTLVNLENGDTIRYCNFSCSVCHYLITGSCFKET 392
            +VD S VSFS+FL MFD+PD GFGIM TLV LE GD  R+    C+VC Y I GS FKE 
Sbjct: 688  DVDTSMVSFSEFLVMFDDPDWGFGIMPTLVKLETGDRNRHGKTMCAVCRYPIIGSRFKEI 747

Query: 391  KSHFNLCSKCYSEGKVPAAIKSVECSFKEYGNEAEAIKDKCTILNLHSRS 242
            KSHFNLC++CYSEGKVP+  K  E  FKEYGNE EA+KDKCT  NL  R+
Sbjct: 748  KSHFNLCNQCYSEGKVPSTFKQEEYRFKEYGNEGEAMKDKCTCFNLQPRN 797


>ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
            gi|223551182|gb|EEF52668.1| tetratricopeptide repeat
            protein, tpr, putative [Ricinus communis]
          Length = 804

 Score =  341 bits (875), Expect = 2e-91
 Identities = 180/290 (62%), Positives = 212/290 (73%)
 Frame = -2

Query: 1111 VVEPSNFKRGYEETTSREDLANAL*IRAFQRLTRLGFCHVDFLMKEISEMKVPVSYARTV 932
            VVE S FK   E+TT+R+DLANAL +RAFQR+TRL  C V+ L KE++E  VPVSY+   
Sbjct: 514  VVELSKFKTASEKTTARQDLANALQVRAFQRITRLSRCDVELLKKEMTENDVPVSYSGGG 573

Query: 931  GLEKYVRESALEAILRNLLHFLKPETFQGAVKAINKRILSVLNSWESSKVDLGMLCALLA 752
              EK +R+  LE ILR LL FLKPETFQGAVKAIN+RILSVL+   S +VDLGM  A+LA
Sbjct: 574  FPEKSIRKPNLEEILRRLLSFLKPETFQGAVKAINERILSVLDEMGSGRVDLGMFFAVLA 633

Query: 751  PICSGPPEQRKRTVFDALLWRYVGEGSSVVKKVDAMRYIELLRAIYRPSQSTNRTSEFYG 572
            PICSG P++RKR  FD+LLW  V EGSS VKKVDA+RYI+LLRAIY PS   +   E +G
Sbjct: 634  PICSGNPDKRKRIAFDSLLWLPVNEGSSQVKKVDAVRYIKLLRAIYIPSHGVSEMLEVHG 693

Query: 571  EVDVSTVSFSKFL*MFDNPDCGFGIMDTLVNLENGDTIRYCNFSCSVCHYLITGSCFKET 392
              D S VSF+ FL MFD+PD GFGIM TL+ LE GD  R+ N  CSVC Y I GS FKE 
Sbjct: 694  GTDSSMVSFNDFLVMFDDPDWGFGIMSTLIKLETGDRNRHGNHVCSVCRYPIIGSRFKEM 753

Query: 391  KSHFNLCSKCYSEGKVPAAIKSVECSFKEYGNEAEAIKDKCTILNLHSRS 242
            KS F+LC++CYSEGKVP A K  E  FKEYGNE+EA+KDKC    L S +
Sbjct: 754  KSRFSLCNQCYSEGKVPPAFKQDEYKFKEYGNESEAVKDKCMCFTLQSHN 803


>ref|XP_002300731.1| predicted protein [Populus trichocarpa] gi|222842457|gb|EEE80004.1|
            predicted protein [Populus trichocarpa]
          Length = 797

 Score =  340 bits (872), Expect = 4e-91
 Identities = 177/290 (61%), Positives = 213/290 (73%)
 Frame = -2

Query: 1111 VVEPSNFKRGYEETTSREDLANAL*IRAFQRLTRLGFCHVDFLMKEISEMKVPVSYARTV 932
            +VEPS FKR  ++TT R+DLANAL IRAFQR+TRL  C V+ L KE+SE  VPVSY+   
Sbjct: 506  IVEPSKFKRLNDKTTLRQDLANALQIRAFQRITRLSRCDVELLKKEMSENDVPVSYSGGG 565

Query: 931  GLEKYVRESALEAILRNLLHFLKPETFQGAVKAINKRILSVLNSWESSKVDLGMLCALLA 752
              EK +R+  LE +LR LL+FLKPETFQGAVKAIN+RILSV +     +VDLGM  A+LA
Sbjct: 566  VPEKSIRKPNLEEVLRRLLNFLKPETFQGAVKAINERILSVFDETGQGRVDLGMFYAILA 625

Query: 751  PICSGPPEQRKRTVFDALLWRYVGEGSSVVKKVDAMRYIELLRAIYRPSQSTNRTSEFYG 572
            PICSG PE+RKR  FDALLWR V E  S +K  DA+ +I+ LRAIY PS   +   E +G
Sbjct: 626  PICSGNPEKRKRVAFDALLWRPVSESGSQIKAADAVTFIKFLRAIYVPSHGVSEMLEVHG 685

Query: 571  EVDVSTVSFSKFL*MFDNPDCGFGIMDTLVNLENGDTIRYCNFSCSVCHYLITGSCFKET 392
            E D S VSF +FL MFD+PD GFGIM TL+ LE+GD  R+ ++ CSVC Y I GS FKE 
Sbjct: 686  EADSSMVSFKEFLVMFDDPDWGFGIMSTLMKLESGDRNRHGHYVCSVCRYPIIGSRFKEI 745

Query: 391  KSHFNLCSKCYSEGKVPAAIKSVECSFKEYGNEAEAIKDKCTILNLHSRS 242
            KSHF+LC++CYSEGKVP A K  E  FKEYG+EAEA+KDKCT L L S +
Sbjct: 746  KSHFSLCNQCYSEGKVPPAFKQDEYIFKEYGSEAEAMKDKCTCLPLQSHN 795


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