BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016052
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   282   6e-74
emb|CBI24015.3| unnamed protein product [Vitis vinifera]              275   1e-71
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   275   1e-71
emb|CBI28140.3| unnamed protein product [Vitis vinifera]              274   2e-71
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...   274   2e-71

>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 738

 Score =  282 bits (722), Expect = 6e-74
 Identities = 135/240 (56%), Positives = 171/240 (71%)
 Frame = -1

Query: 877  LRPKIEHYGCMVDVLGRTHQLDEAVNLVDQMPIEPNAVILGSLLSACRVRNDSXXXXXXX 698
            + PK++HYGCM+D+LGR    DEA  L+  M ++P+  I GSLL ACRV  +        
Sbjct: 499  ISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAA 558

Query: 697  XXXXXXXXLNSGYYVLLSNMYASAKRWKDVTRVRNLMKSKGIGKTPGCSSIEVNNTVHEF 518
                     N G YVLLSN+YA+A RW DV R+R  +  KG+ K PGCSSIEV++ VHEF
Sbjct: 559  KHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEF 618

Query: 517  VVGDKTHLQTQEIYNKLGEISRRLESVGYVPDTSVVLFDLDEEEKAESLSIHSEKLAVAF 338
            +VGDK H Q+Q+IY  L EI + LE  G+VPDTS VL+D+DEE K  SLS HSEKLA+AF
Sbjct: 619  LVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAF 678

Query: 337  GLLDTSRKKTIRVVKNLRVCRDCHIAIKLISQVYDREIVLRDCNRFHHFKDGQCSCKEFW 158
            GL+ T  + TIR+VKNLRVC +CH AIKLIS++++REI+ RD NRFHHFKDG CSC ++W
Sbjct: 679  GLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738


>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  275 bits (703), Expect = 1e-71
 Identities = 130/240 (54%), Positives = 170/240 (70%)
 Frame = -1

Query: 877  LRPKIEHYGCMVDVLGRTHQLDEAVNLVDQMPIEPNAVILGSLLSACRVRNDSXXXXXXX 698
            L+P +EH+GCMVD+LGR   L+EA  L+++MP+ P+A +LG+L+ ACR+  ++       
Sbjct: 330  LKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIG 389

Query: 697  XXXXXXXXLNSGYYVLLSNMYASAKRWKDVTRVRNLMKSKGIGKTPGCSSIEVNNTVHEF 518
                     NSG YVLL+N+YASA RW+DV +VR LM  +G+ K PG S IE  + V EF
Sbjct: 390  KKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEF 449

Query: 517  VVGDKTHLQTQEIYNKLGEISRRLESVGYVPDTSVVLFDLDEEEKAESLSIHSEKLAVAF 338
            + G + H Q +EIY KL EI   + S+GYVPDT  VL D+DEEEK   L  HSEKLA+AF
Sbjct: 450  IAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAF 509

Query: 337  GLLDTSRKKTIRVVKNLRVCRDCHIAIKLISQVYDREIVLRDCNRFHHFKDGQCSCKEFW 158
            GLL T   +T+R+ KNLR+CRDCH A KLIS+VYDREI++RD NRFHHF+ G CSCK++W
Sbjct: 510  GLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 624

 Score =  275 bits (703), Expect = 1e-71
 Identities = 130/240 (54%), Positives = 170/240 (70%)
 Frame = -1

Query: 877  LRPKIEHYGCMVDVLGRTHQLDEAVNLVDQMPIEPNAVILGSLLSACRVRNDSXXXXXXX 698
            L+P +EH+GCMVD+LGR   L+EA  L+++MP+ P+A +LG+L+ ACR+  ++       
Sbjct: 385  LKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIG 444

Query: 697  XXXXXXXXLNSGYYVLLSNMYASAKRWKDVTRVRNLMKSKGIGKTPGCSSIEVNNTVHEF 518
                     NSG YVLL+N+YASA RW+DV +VR LM  +G+ K PG S IE  + V EF
Sbjct: 445  KKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEF 504

Query: 517  VVGDKTHLQTQEIYNKLGEISRRLESVGYVPDTSVVLFDLDEEEKAESLSIHSEKLAVAF 338
            + G + H Q +EIY KL EI   + S+GYVPDT  VL D+DEEEK   L  HSEKLA+AF
Sbjct: 505  IAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAF 564

Query: 337  GLLDTSRKKTIRVVKNLRVCRDCHIAIKLISQVYDREIVLRDCNRFHHFKDGQCSCKEFW 158
            GLL T   +T+R+ KNLR+CRDCH A KLIS+VYDREI++RD NRFHHF+ G CSCK++W
Sbjct: 565  GLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624


>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  274 bits (700), Expect = 2e-71
 Identities = 131/240 (54%), Positives = 167/240 (69%)
 Frame = -1

Query: 877  LRPKIEHYGCMVDVLGRTHQLDEAVNLVDQMPIEPNAVILGSLLSACRVRNDSXXXXXXX 698
            ++P IEHYGCMVD+LGR  ++ EA +L+  MP+ P+  +L  LLSACR+  +        
Sbjct: 341  IQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAA 400

Query: 697  XXXXXXXXLNSGYYVLLSNMYASAKRWKDVTRVRNLMKSKGIGKTPGCSSIEVNNTVHEF 518
                     N G YVLLSN+Y+S K W+   ++R LM  + I K PGCS+IEV   VHEF
Sbjct: 401  QQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEF 460

Query: 517  VVGDKTHLQTQEIYNKLGEISRRLESVGYVPDTSVVLFDLDEEEKAESLSIHSEKLAVAF 338
            V GD +H Q+ EIY  L ++ RRL+S GYVPD S VLFD+DE+EK   LS+HSEKLA+AF
Sbjct: 461  VKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAF 520

Query: 337  GLLDTSRKKTIRVVKNLRVCRDCHIAIKLISQVYDREIVLRDCNRFHHFKDGQCSCKEFW 158
            GLL T+    IRVVKNLRVC DCH A+K IS+VY+REI++RD NRFHHF  G CSC++FW
Sbjct: 521  GLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580


>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic [Vitis vinifera]
          Length = 711

 Score =  274 bits (700), Expect = 2e-71
 Identities = 131/240 (54%), Positives = 167/240 (69%)
 Frame = -1

Query: 877  LRPKIEHYGCMVDVLGRTHQLDEAVNLVDQMPIEPNAVILGSLLSACRVRNDSXXXXXXX 698
            ++P IEHYGCMVD+LGR  ++ EA +L+  MP+ P+  +L  LLSACR+  +        
Sbjct: 472  IQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAA 531

Query: 697  XXXXXXXXLNSGYYVLLSNMYASAKRWKDVTRVRNLMKSKGIGKTPGCSSIEVNNTVHEF 518
                     N G YVLLSN+Y+S K W+   ++R LM  + I K PGCS+IEV   VHEF
Sbjct: 532  QQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEF 591

Query: 517  VVGDKTHLQTQEIYNKLGEISRRLESVGYVPDTSVVLFDLDEEEKAESLSIHSEKLAVAF 338
            V GD +H Q+ EIY  L ++ RRL+S GYVPD S VLFD+DE+EK   LS+HSEKLA+AF
Sbjct: 592  VKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAF 651

Query: 337  GLLDTSRKKTIRVVKNLRVCRDCHIAIKLISQVYDREIVLRDCNRFHHFKDGQCSCKEFW 158
            GLL T+    IRVVKNLRVC DCH A+K IS+VY+REI++RD NRFHHF  G CSC++FW
Sbjct: 652  GLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711