BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016044
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]   156   4e-36
ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi...   155   6e-36
ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|2...   153   4e-35
ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containi...   152   6e-35
ref|XP_003590730.1| Pentatricopeptide repeat-containing protein ...   144   2e-32

>emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  156 bits (394), Expect = 4e-36
 Identities = 74/143 (51%), Positives = 99/143 (69%)
 Frame = +3

Query: 102 IDYKIRAGQINKASKFIRRMPVKPGSSVWGSLLGASAVHENSDMQELAYKSLIQLEPQNP 281
           +D   RAGQ+++A  FI+ +PV+PG SVWG+L+  S +H + +MQELAY+ LIQLEP+NP
Sbjct: 480 VDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNP 539

Query: 282 SNYVSLSNIYASVKRWDVVADXXXXXXXXXXXXXXXCSWITISNETHSFRVADKTHPCSP 461
           SNYVS+SN+YAS +RWD VA+               CSWI+I+N+TH F VADK HP S 
Sbjct: 540 SNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSST 599

Query: 462 VIYQMLDDLIVTMKGSTNVPDFD 530
            IY MLDDL++TM  +   P  +
Sbjct: 600 SIYNMLDDLLLTMNDAICSPHLE 622


>ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  155 bits (393), Expect = 6e-36
 Identities = 74/143 (51%), Positives = 98/143 (68%)
 Frame = +3

Query: 102 IDYKIRAGQINKASKFIRRMPVKPGSSVWGSLLGASAVHENSDMQELAYKSLIQLEPQNP 281
           +D   RAGQ++ A  FI+ MPV+PG SVWG+L+  S +H + +MQELAY+ LIQLEP+NP
Sbjct: 480 VDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENP 539

Query: 282 SNYVSLSNIYASVKRWDVVADXXXXXXXXXXXXXXXCSWITISNETHSFRVADKTHPCSP 461
           SNYVS+SN+YAS +RWD VA+               CSWI+I+N+TH F VADK HP + 
Sbjct: 540 SNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSAT 599

Query: 462 VIYQMLDDLIVTMKGSTNVPDFD 530
            IY MLDDL++TM  +   P  +
Sbjct: 600 SIYNMLDDLLLTMNDAICSPHLE 622


>ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|222863556|gb|EEF00687.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  153 bits (386), Expect = 4e-35
 Identities = 71/143 (49%), Positives = 99/143 (69%)
 Frame = +3

Query: 102 IDYKIRAGQINKASKFIRRMPVKPGSSVWGSLLGASAVHENSDMQELAYKSLIQLEPQNP 281
           +D   R+GQ+ +A  +I+ MP++P  SVWG+++ AS +H NS+MQ+LAY+ L+QLEP+NP
Sbjct: 484 VDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSASIIHGNSEMQDLAYRFLVQLEPENP 543

Query: 282 SNYVSLSNIYASVKRWDVVADXXXXXXXXXXXXXXXCSWITISNETHSFRVADKTHPCSP 461
           SNYVSLSN++AS +RWDVV++               CSWI+I+N TH F  ADK HPCS 
Sbjct: 544 SNYVSLSNLHASSRRWDVVSEVRTMMKDRCLTKTPGCSWISINNTTHFFYAADKLHPCSK 603

Query: 462 VIYQMLDDLIVTMKGSTNVPDFD 530
            IY++L  LI+ MKG     DF+
Sbjct: 604 SIYELLGGLILLMKGPAVSHDFE 626


>ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  152 bits (384), Expect = 6e-35
 Identities = 72/133 (54%), Positives = 94/133 (70%)
 Frame = +3

Query: 102 IDYKIRAGQINKASKFIRRMPVKPGSSVWGSLLGASAVHENSDMQELAYKSLIQLEPQNP 281
           +D   R+GQ+++A +FI+ MP+ PG SVWGSLL AS +H NS  ++LAY+ L++LEP+NP
Sbjct: 487 VDMLGRSGQLDQALEFIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENP 546

Query: 282 SNYVSLSNIYASVKRWDVVADXXXXXXXXXXXXXXXCSWITISNETHSFRVADKTHPCSP 461
           SNY+SLSN YAS +RWDVV +               CSWITIS +THSF VADK HP S 
Sbjct: 547 SNYISLSNTYASDRRWDVVTEVRTIMKERGLKKVPGCSWITISGKTHSFSVADKAHPSSS 606

Query: 462 VIYQMLDDLIVTM 500
           +IY+ML DL+  M
Sbjct: 607 LIYEMLGDLVSIM 619


>ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479778|gb|AES60981.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/133 (51%), Positives = 90/133 (67%)
 Frame = +3

Query: 102 IDYKIRAGQINKASKFIRRMPVKPGSSVWGSLLGASAVHENSDMQELAYKSLIQLEPQNP 281
           +D   R+GQ+++A  FIR MP+ PG SVWGSLL AS +H NS  ++LAY+ L++LEP+NP
Sbjct: 484 VDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENP 543

Query: 282 SNYVSLSNIYASVKRWDVVADXXXXXXXXXXXXXXXCSWITISNETHSFRVADKTHPCSP 461
           SNY+SLSN YAS +RWD + +                SWITIS++ H F VADK HP S 
Sbjct: 544 SNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSS 603

Query: 462 VIYQMLDDLIVTM 500
            IY+MLDDL+  M
Sbjct: 604 SIYEMLDDLVSIM 616