BLASTX nr result
ID: Coptis23_contig00016025
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00016025 (535 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510900.1| hypothetical protein RCOM_1498790 [Ricinus c... 80 2e-13 emb|CAN66820.1| hypothetical protein VITISV_003496 [Vitis vinifera] 77 2e-12 ref|XP_002321853.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-12 gb|ACU21406.1| unknown [Glycine max] 74 1e-11 ref|XP_003558913.1| PREDICTED: uncharacterized protein LOC100832... 73 3e-11 >ref|XP_002510900.1| hypothetical protein RCOM_1498790 [Ricinus communis] gi|223550015|gb|EEF51502.1| hypothetical protein RCOM_1498790 [Ricinus communis] Length = 278 Score = 80.1 bits (196), Expect = 2e-13 Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%) Frame = -2 Query: 498 VRQEGTVPFLWEEKPGTPKKDWKMETVSVNTV--PTLVKLVSTIPFKWEEKPGKPLPIFT 325 +RQ VPFLWEE+PG KKDWK SV T+ P VKL++++PF WEEKPGKPLP F+ Sbjct: 15 IRQPPFVPFLWEERPGIAKKDWKPVVSSVTTLALPPPVKLIASVPFNWEEKPGKPLPCFS 74 Query: 324 K 322 + Sbjct: 75 Q 75 >emb|CAN66820.1| hypothetical protein VITISV_003496 [Vitis vinifera] Length = 341 Score = 76.6 bits (187), Expect = 2e-12 Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 27/85 (31%) Frame = -2 Query: 498 VRQEGTVPFLWEEKPGTPKKDWKMETVSVN---------------------------TVP 400 +RQ +VPFLWEEKPG PKKDWK E +VN P Sbjct: 13 IRQPPSVPFLWEEKPGIPKKDWKPEVTAVNPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 72 Query: 399 TLVKLVSTIPFKWEEKPGKPLPIFT 325 +KL+++IPF WEEKPGKPLP F+ Sbjct: 73 PPIKLIASIPFTWEEKPGKPLPFFS 97 >ref|XP_002321853.1| predicted protein [Populus trichocarpa] gi|222868849|gb|EEF05980.1| predicted protein [Populus trichocarpa] Length = 333 Score = 75.1 bits (183), Expect = 6e-12 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Frame = -2 Query: 498 VRQEGTVPFLWEEKPGTPKKDWKMETVSVNTVP-TLVKLVSTIPFKWEEKPGKPLPIFTK 322 +RQ +VPFLWE +PG K+DWK E SV V VKL++++PF WEEKPGKPL F++ Sbjct: 34 IRQPPSVPFLWEVRPGVAKRDWKPEVSSVTPVQLPPVKLIASVPFNWEEKPGKPLSCFSQ 93 Query: 321 S 319 S Sbjct: 94 S 94 >gb|ACU21406.1| unknown [Glycine max] Length = 222 Score = 73.9 bits (180), Expect = 1e-11 Identities = 33/58 (56%), Positives = 42/58 (72%) Frame = -2 Query: 498 VRQEGTVPFLWEEKPGTPKKDWKMETVSVNTVPTLVKLVSTIPFKWEEKPGKPLPIFT 325 VR+ +VPF+WE KPG PKKDWK E T +KL++++PF WEEKPGKPLP F+ Sbjct: 10 VREPPSVPFIWEVKPGIPKKDWKPEP-EPEVPKTPLKLIASVPFVWEEKPGKPLPNFS 66 >ref|XP_003558913.1| PREDICTED: uncharacterized protein LOC100832590 [Brachypodium distachyon] Length = 234 Score = 72.8 bits (177), Expect = 3e-11 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 2/60 (3%) Frame = -2 Query: 510 PVTSVRQEGTVPFLWEEKPGTPKKDWKME--TVSVNTVPTLVKLVSTIPFKWEEKPGKPL 337 P VRQ+ +VPFLWE KPG PK+DW + SV + P+ KLV ++PF+WEEKPGKPL Sbjct: 12 PRERVRQQISVPFLWEVKPGAPKRDWVISKPVSSVFSCPSPAKLVVSVPFQWEEKPGKPL 71