BLASTX nr result

ID: Coptis23_contig00016025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016025
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510900.1| hypothetical protein RCOM_1498790 [Ricinus c...    80   2e-13
emb|CAN66820.1| hypothetical protein VITISV_003496 [Vitis vinifera]    77   2e-12
ref|XP_002321853.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
gb|ACU21406.1| unknown [Glycine max]                                   74   1e-11
ref|XP_003558913.1| PREDICTED: uncharacterized protein LOC100832...    73   3e-11

>ref|XP_002510900.1| hypothetical protein RCOM_1498790 [Ricinus communis]
           gi|223550015|gb|EEF51502.1| hypothetical protein
           RCOM_1498790 [Ricinus communis]
          Length = 278

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = -2

Query: 498 VRQEGTVPFLWEEKPGTPKKDWKMETVSVNTV--PTLVKLVSTIPFKWEEKPGKPLPIFT 325
           +RQ   VPFLWEE+PG  KKDWK    SV T+  P  VKL++++PF WEEKPGKPLP F+
Sbjct: 15  IRQPPFVPFLWEERPGIAKKDWKPVVSSVTTLALPPPVKLIASVPFNWEEKPGKPLPCFS 74

Query: 324 K 322
           +
Sbjct: 75  Q 75


>emb|CAN66820.1| hypothetical protein VITISV_003496 [Vitis vinifera]
          Length = 341

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 27/85 (31%)
 Frame = -2

Query: 498 VRQEGTVPFLWEEKPGTPKKDWKMETVSVN---------------------------TVP 400
           +RQ  +VPFLWEEKPG PKKDWK E  +VN                             P
Sbjct: 13  IRQPPSVPFLWEEKPGIPKKDWKPEVTAVNPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 72

Query: 399 TLVKLVSTIPFKWEEKPGKPLPIFT 325
             +KL+++IPF WEEKPGKPLP F+
Sbjct: 73  PPIKLIASIPFTWEEKPGKPLPFFS 97


>ref|XP_002321853.1| predicted protein [Populus trichocarpa] gi|222868849|gb|EEF05980.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = -2

Query: 498 VRQEGTVPFLWEEKPGTPKKDWKMETVSVNTVP-TLVKLVSTIPFKWEEKPGKPLPIFTK 322
           +RQ  +VPFLWE +PG  K+DWK E  SV  V    VKL++++PF WEEKPGKPL  F++
Sbjct: 34  IRQPPSVPFLWEVRPGVAKRDWKPEVSSVTPVQLPPVKLIASVPFNWEEKPGKPLSCFSQ 93

Query: 321 S 319
           S
Sbjct: 94  S 94


>gb|ACU21406.1| unknown [Glycine max]
          Length = 222

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/58 (56%), Positives = 42/58 (72%)
 Frame = -2

Query: 498 VRQEGTVPFLWEEKPGTPKKDWKMETVSVNTVPTLVKLVSTIPFKWEEKPGKPLPIFT 325
           VR+  +VPF+WE KPG PKKDWK E        T +KL++++PF WEEKPGKPLP F+
Sbjct: 10  VREPPSVPFIWEVKPGIPKKDWKPEP-EPEVPKTPLKLIASVPFVWEEKPGKPLPNFS 66


>ref|XP_003558913.1| PREDICTED: uncharacterized protein LOC100832590 [Brachypodium
           distachyon]
          Length = 234

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
 Frame = -2

Query: 510 PVTSVRQEGTVPFLWEEKPGTPKKDWKME--TVSVNTVPTLVKLVSTIPFKWEEKPGKPL 337
           P   VRQ+ +VPFLWE KPG PK+DW +     SV + P+  KLV ++PF+WEEKPGKPL
Sbjct: 12  PRERVRQQISVPFLWEVKPGAPKRDWVISKPVSSVFSCPSPAKLVVSVPFQWEEKPGKPL 71


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