BLASTX nr result

ID: Coptis23_contig00015237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015237
         (1397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274167.1| PREDICTED: uncharacterized protein LOC100245...   281   4e-73
emb|CCA29110.1| putative MYB transcription factor [Rosa hybrid c...   278   3e-72
ref|XP_002511974.1| DNA binding protein, putative [Ricinus commu...   275   2e-71
ref|NP_001235894.1| MYB transcription factor MYB109 [Glycine max...   274   5e-71
emb|CBI15416.3| unnamed protein product [Vitis vinifera]              266   7e-69

>ref|XP_002274167.1| PREDICTED: uncharacterized protein LOC100245771 [Vitis vinifera]
          Length = 296

 Score =  281 bits (718), Expect = 4e-73
 Identities = 146/268 (54%), Positives = 169/268 (63%), Gaps = 15/268 (5%)
 Frame = +1

Query: 274  WTREEDKAFENAIAAHWLEDSKDKWEKIATSVPRKTVAEVKRHYDILVEDLKAIEAGHVP 453
            W+REE+KAFENAIA HW ED K+ W+KIA+ VP K+V E+K+HY  LVED+ AIEAGH+P
Sbjct: 8    WSREEEKAFENAIAMHWTEDCKEVWDKIASMVPGKSVDELKQHYQFLVEDVNAIEAGHIP 67

Query: 454  VPNYVGDETTT---KEHQ------EDSKMNYNYANGFYXXXXXXXXXXXXXXXXXEQERR 606
            +PNY  DE ++   K+H        D + N  +  GF                  EQERR
Sbjct: 68   LPNYAADEASSSSVKDHHALPSATSDKRSNCGFGGGFSGLGHDSAVQGGKGGSRSEQERR 127

Query: 607  KGIPWTEEEHRXXXXXXXXXXXXXWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRR 786
            KGIPWTEEEHR             WRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRR
Sbjct: 128  KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRR 187

Query: 787  RSSIHDITSINGTDVSSP----XXXXXXXXXXXXXXXXXXPSMKHRPMPPNMP--GVGMY 948
            RSSIHDITS+N  DVS+P                      P +KH    P+MP   +GMY
Sbjct: 188  RSSIHDITSVNNGDVSTPQAPITGQQGNGNPASAAAAGVGPPLKHHRAQPSMPAGALGMY 247

Query: 949  GAPMGQPISGPGAHMVSAVGTPVMLPPG 1032
            G PMG P++ P  HM SAVGTPVMLPPG
Sbjct: 248  GTPMGHPVAAPPGHMASAVGTPVMLPPG 275


>emb|CCA29110.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 302

 Score =  278 bits (710), Expect = 3e-72
 Identities = 148/271 (54%), Positives = 174/271 (64%), Gaps = 19/271 (7%)
 Frame = +1

Query: 274  WTREEDKAFENAIAAHWLEDSKDK-WEKIATSVPRKTVAEVKRHYDILVEDLKAIEAGHV 450
            WTREEDK FENAIA HW+ED ++  W+KIA+ VP K++ E+KRHY +LVED+ AI +G++
Sbjct: 4    WTREEDKTFENAIALHWIEDDEESSWDKIASLVPSKSMEELKRHYQMLVEDVSAIVSGNI 63

Query: 451  PVPNYVGDETTTKEHQE------------DSKMNYNYANG--FYXXXXXXXXXXXXXXXX 588
            PVPNY G+E TT   +E            D +++  + NG  F                 
Sbjct: 64   PVPNYGGEEATTSVSKESSSARASSSGVSDKRLSSGHGNGGGFSALGHDSSGHGSKGGSR 123

Query: 589  XEQERRKGIPWTEEEHRXXXXXXXXXXXXXWRSISRNFVISRTPTQVASHAQKYFIRLNS 768
             +QER+KGIPWTEEEHR             WRSISRNFVISRTPTQVASHAQKYFIRLNS
Sbjct: 124  SDQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 183

Query: 769  MNRDRRRSSIHDITSI-NGTDVSS---PXXXXXXXXXXXXXXXXXXPSMKHRPMPPNMPG 936
            MNRDRRRSSIHDITS+ NG DV S   P                  PS+KHRP  P+M G
Sbjct: 184  MNRDRRRSSIHDITSVNNGGDVPSHQAPITGQQSNAYAPSAAAIGPPSVKHRPHQPHMAG 243

Query: 937  VGMYGAPMGQPISGPGAHMVSAVGTPVMLPP 1029
            +GMYGAPMG P+S P  HM SAVGTPVMLPP
Sbjct: 244  LGMYGAPMGHPVSAPPGHMASAVGTPVMLPP 274


>ref|XP_002511974.1| DNA binding protein, putative [Ricinus communis]
            gi|223549154|gb|EEF50643.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 297

 Score =  275 bits (704), Expect = 2e-71
 Identities = 142/266 (53%), Positives = 175/266 (65%), Gaps = 14/266 (5%)
 Frame = +1

Query: 274  WTREEDKAFENAIAAHWLED-SKDKWEKIATSVPRKTVAEVKRHYDILVEDLKAIEAGHV 450
            W+REED AFENAIA HW+ED S+++WEKIA+ VP + + E+K+HY +LVED+ AIEAG+V
Sbjct: 8    WSREEDIAFENAIATHWIEDDSEEQWEKIASMVPSRNIEELKQHYRLLVEDVDAIEAGNV 67

Query: 451  PVPNYVGDETTTKEHQE----------DSKMNYNYANGFYXXXXXXXXXXXXXXXXXEQE 600
            P+PNYVG+ETT+   ++          D ++N  + +GF                  +QE
Sbjct: 68   PLPNYVGEETTSSSSKDSHGFSGAVTTDKRLNCGFGSGFMGLGPNSSGHGGKGGSRADQE 127

Query: 601  RRKGIPWTEEEHRXXXXXXXXXXXXXWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRD 780
            RRKGIPWTEEEHR             WRSISRNFV+SRTPTQVASHAQKYFIRLNSMNRD
Sbjct: 128  RRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVLSRTPTQVASHAQKYFIRLNSMNRD 187

Query: 781  RRRSSIHDITSINGTDVSS---PXXXXXXXXXXXXXXXXXXPSMKHRPMPPNMPGVGMYG 951
            RRRSSIHDITS+N  +VSS   P                   ++KHR    +MP +GMYG
Sbjct: 188  RRRSSIHDITSVNNGEVSSHQAPITGQQGNTNPAAGAPAMGSAVKHRAQ-HHMPSIGMYG 246

Query: 952  APMGQPISGPGAHMVSAVGTPVMLPP 1029
            AP+G P++ P  HM SAVGTPVMLPP
Sbjct: 247  APVGHPVAAPPGHMASAVGTPVMLPP 272


>ref|NP_001235894.1| MYB transcription factor MYB109 [Glycine max]
            gi|356511607|ref|XP_003524515.1| PREDICTED:
            uncharacterized protein LOC100812196 [Glycine max]
            gi|110931704|gb|ABH02851.1| MYB transcription factor
            MYB109 [Glycine max]
          Length = 307

 Score =  274 bits (700), Expect = 5e-71
 Identities = 148/275 (53%), Positives = 173/275 (62%), Gaps = 16/275 (5%)
 Frame = +1

Query: 256  MSDDGQ-WTREEDKAFENAIAAHWLEDS-KDKWEKIATSVPRKTVAEVKRHYDILVEDLK 429
            MS  G  W+ +E+KAFENAIA HW+E+S K++WEKIA++VP K++ EVK+HY +LVED+ 
Sbjct: 1    MSSSGTIWSYDEEKAFENAIAMHWIEESSKEQWEKIASAVPSKSMEEVKQHYQVLVEDVS 60

Query: 430  AIEAGHVPVPNYVGDETTT---------KEHQEDSKMNYNYANGFYXXXXXXXXXXXXXX 582
            AIEAGH+  PNY  DETT+         K    D + N NY +GF               
Sbjct: 61   AIEAGHISFPNYASDETTSSNKDFHGSSKATSSDKRSNCNYGSGFSGLGLDSTTHSSGKG 120

Query: 583  XXX---EQERRKGIPWTEEEHRXXXXXXXXXXXXXWRSISRNFVISRTPTQVASHAQKYF 753
                  EQERRKGIPWTEEEHR             WRSISRNFVISRTPTQVASHAQKYF
Sbjct: 121  GLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 180

Query: 754  IRLNSMNRDRRRSSIHDITSINGTDVSS--PXXXXXXXXXXXXXXXXXXPSMKHRPMPPN 927
            IRLNSMNRDRRRSSIHDITS+N  DV+S                      S+KHR     
Sbjct: 181  IRLNSMNRDRRRSSIHDITSVNNGDVASSQAPITGLHSSTISSNTMGVGQSLKHRVQGHI 240

Query: 928  MPGVGMYGAPMGQPISGPGAHMVSAVGTPVMLPPG 1032
             PG+GMYG P+G P++ P  HM SAVGTPVMLPPG
Sbjct: 241  PPGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPG 275


>emb|CBI15416.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  266 bits (681), Expect = 7e-69
 Identities = 140/259 (54%), Positives = 160/259 (61%), Gaps = 6/259 (2%)
 Frame = +1

Query: 274  WTREEDKAFENAIAAHWLEDSKDKWEKIATSVPRKTVAEVKRHYDILVEDLKAIEAGHVP 453
            W+REE+KAFENAIA HW ED K+ W+KIA+ VP K+V E+K+HY  LVED+ AIEAGH+P
Sbjct: 8    WSREEEKAFENAIAMHWTEDCKEVWDKIASMVPGKSVDELKQHYQFLVEDVNAIEAGHIP 67

Query: 454  VPNYVGDETTTKEHQEDSKMNYNYANGFYXXXXXXXXXXXXXXXXXEQERRKGIPWTEEE 633
            +PNY  DE ++                                   EQERRKGIPWTEEE
Sbjct: 68   LPNYAADEASS-----------------------------------EQERRKGIPWTEEE 92

Query: 634  HRXXXXXXXXXXXXXWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITS 813
            HR             WRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITS
Sbjct: 93   HRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITS 152

Query: 814  INGTDVSSP----XXXXXXXXXXXXXXXXXXPSMKHRPMPPNMP--GVGMYGAPMGQPIS 975
            +N  DVS+P                      P +KH    P+MP   +GMYG PMG P++
Sbjct: 153  VNNGDVSTPQAPITGQQGNGNPASAAAAGVGPPLKHHRAQPSMPAGALGMYGTPMGHPVA 212

Query: 976  GPGAHMVSAVGTPVMLPPG 1032
             P  HM SAVGTPVMLPPG
Sbjct: 213  APPGHMASAVGTPVMLPPG 231


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