BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015103
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like prote...    63   2e-08
gb|AFK41314.1| unknown [Lotus japonicus]                               62   5e-08
ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like prote...    62   5e-08
ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Me...    62   5e-08
ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycin...    62   5e-08

>ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus] gi|449498381|ref|XP_004160523.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus]
          Length = 92

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -2

Query: 332 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 240
           GQLKNKYGDAFIRGNNVLYISTSKRTL EGS
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGS 91


>gb|AFK41314.1| unknown [Lotus japonicus]
          Length = 90

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 332 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 240
           GQLKNKYGDAFIRGNNVLYISTSKRTL EG+
Sbjct: 60  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 90


>ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Glycine
           max]
          Length = 91

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 332 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 240
           GQLKNKYGDAFIRGNNVLYISTSKRTL EG+
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91


>ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Medicago truncatula]
           gi|355508672|gb|AES89814.1| U6 snRNA-associated Sm-like
           protein LSm6 [Medicago truncatula]
           gi|388502230|gb|AFK39181.1| unknown [Medicago
           truncatula]
          Length = 91

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 332 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 240
           GQLKNKYGDAFIRGNNVLYISTSKRTL EG+
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91


>ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycine max]
           gi|255627589|gb|ACU14139.1| unknown [Glycine max]
          Length = 91

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 332 GQLKNKYGDAFIRGNNVLYISTSKRTLPEGS 240
           GQLKNKYGDAFIRGNNVLYISTSKRTL EG+
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91