BLASTX nr result

ID: Coptis23_contig00014496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014496
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis...   247   4e-63
ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis...   244   2e-62
ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|2...   235   1e-59
gb|ABK94888.1| unknown [Populus trichocarpa]                          234   3e-59
ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|2...   233   9e-59

>ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
            gi|296089330|emb|CBI39102.3| unnamed protein product
            [Vitis vinifera]
          Length = 200

 Score =  247 bits (631), Expect = 4e-63
 Identities = 129/198 (65%), Positives = 152/198 (76%), Gaps = 8/198 (4%)
 Frame = -2

Query: 1091 MPKVYPNAVAPQALKPA-----SDGQVQVLTVWKKSLLFNCKGFTVFDAKGNLVFRVDNY 927
            M KVYPNA A  +           G   VLTVWKKSLLFNC GFTVFD KGNLVFRVDNY
Sbjct: 1    MTKVYPNATAASSGSEGVKLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVFRVDNY 60

Query: 926  LCSNKTEILLMDATGKPLLTIRRKKLTLGDNWVVFDGETEVNPLFTVKKQVNLLNSRSLA 747
            +  NK EI+LMDA+GKPLLTIRRK+L+LGDNW+V+DGET  NP F ++K +NLL+S+SLA
Sbjct: 61   VAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGETAANPRFQMRKHLNLLSSKSLA 120

Query: 746  HVSVGSNNNV---LYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXXXXXXXXFRLVVQ 576
             VS GS++++   +Y+IEGSYSQRCCAVYDE+R+ VAEIKRKE           FRL+VQ
Sbjct: 121  RVSGGSSSSMRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMAGVALGVDVFRLIVQ 180

Query: 575  PEMDSTVAMALVILLDQM 522
            PEMD+ VAMALVILLDQM
Sbjct: 181  PEMDTPVAMALVILLDQM 198


>ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
            gi|147770903|emb|CAN65231.1| hypothetical protein
            VITISV_007600 [Vitis vinifera]
            gi|239056173|emb|CAQ58606.1| unknown gene [Vitis
            vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene
            [Vitis vinifera]
          Length = 216

 Score =  244 bits (624), Expect = 2e-62
 Identities = 135/213 (63%), Positives = 150/213 (70%), Gaps = 20/213 (9%)
 Frame = -2

Query: 1091 MPKVYPNAVAPQALKPASDG---------QVQVLTVWKKSLLFNCKGFTVFDAKGNLVFR 939
            M KVYPNA A       S+G            VLTVWKKSLLFNC GFTVFD KGNLVFR
Sbjct: 1    MTKVYPNATAASC---GSEGVNLCIGVGRDAAVLTVWKKSLLFNCNGFTVFDGKGNLVFR 57

Query: 938  VDNYLCSNKTEILLMDATGKPLLTIRRKKLTLGDNWVVFDGETEVNPLFTVKKQVNLLNS 759
            VDNY+  +K EI+LMDA+GKPLLTIRRK+L+LGDNW+V+DGET  NP F V+K  NLLNS
Sbjct: 58   VDNYVAGHKGEIVLMDASGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRKHANLLNS 117

Query: 758  RSLAHVSVG-----------SNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 612
            +SLA VS G           S  N +Y+IEGSYSQRCCAVYDE R+ VAEIKRKE     
Sbjct: 118  KSLARVSGGGGAGGSSSSSSSPRNAMYEIEGSYSQRCCAVYDETRRCVAEIKRKEAVAGV 177

Query: 611  XXXXXXFRLVVQPEMDSTVAMALVILLDQMCGS 513
                  FRLVVQPEMD+ VAMALVILLDQM GS
Sbjct: 178  ALGVDVFRLVVQPEMDTPVAMALVILLDQMFGS 210


>ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1|
            predicted protein [Populus trichocarpa]
          Length = 207

 Score =  235 bits (600), Expect = 1e-59
 Identities = 128/207 (61%), Positives = 154/207 (74%), Gaps = 17/207 (8%)
 Frame = -2

Query: 1091 MPKVYPNAVAPQA---------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDAKGN 951
            M KVYPN VAP           LKPA++        VLTVWKKSLLFNC GFTV+D +GN
Sbjct: 1    MTKVYPN-VAPTTTNKKQQLFNLKPANNALDVDHAVVLTVWKKSLLFNCHGFTVYDGRGN 59

Query: 950  LVFRVDNYLCS--NKTEILLMDATGKPLLTIRRKKLTLGDNWVVFDGETEVNPLFTVKKQ 777
            LVFRVDNY+ +  N  EI+LMDA GKPLLTIRRK+L+LGDNW+V++GET  NP F VKK 
Sbjct: 60   LVFRVDNYMATSGNNGEIVLMDAAGKPLLTIRRKRLSLGDNWLVYEGETTTNPRFLVKKH 119

Query: 776  VNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXXXXX 603
            VN+LN++ LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE        
Sbjct: 120  VNILNTKCLAHVSPASGSNKNVVYEIEGSYAQRCCAVYDEKKRRVAEIKQKESVGGVAFG 179

Query: 602  XXXFRLVVQPEMDSTVAMALVILLDQM 522
               FRL+V PEM +++AMA+VILLDQM
Sbjct: 180  VDVFRLIVGPEMGTSMAMAMVILLDQM 206


>gb|ABK94888.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  234 bits (597), Expect = 3e-59
 Identities = 127/213 (59%), Positives = 160/213 (75%), Gaps = 20/213 (9%)
 Frame = -2

Query: 1091 MPKVYPNAVAPQA------------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDA 960
            M KVYPN VAP A            LK +++        VLTVWKKSLLFNC GFTVFD+
Sbjct: 1    MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59

Query: 959  KGNLVFRVDNYLCSNKT--EILLMDATGKPLLTIRRKKLTLGDNWVVFDGETEVNPLFTV 786
            KGNL+FRVDNY+ ++ +  EI+LMDA GKPLLT+RRK+L+LGD+W+V+DGET +NP F+V
Sbjct: 60   KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119

Query: 785  KKQVNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 612
            KK V++LN + LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE     
Sbjct: 120  KKHVSILNKKCLAHVSQAAGSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGGV 179

Query: 611  XXXXXXFRLVVQPEMDSTVAMALVILLDQMCGS 513
                  FRL+V PE+DS++AMA+VI+LDQM GS
Sbjct: 180  AFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGS 212


>ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|222833453|gb|EEE71930.1|
            predicted protein [Populus trichocarpa]
          Length = 211

 Score =  233 bits (593), Expect = 9e-59
 Identities = 126/212 (59%), Positives = 159/212 (75%), Gaps = 20/212 (9%)
 Frame = -2

Query: 1091 MPKVYPNAVAPQA------------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDA 960
            M KVYPN VAP A            LK +++        VLTVWKKSLLFNC GFTVFD+
Sbjct: 1    MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59

Query: 959  KGNLVFRVDNYLCSNKT--EILLMDATGKPLLTIRRKKLTLGDNWVVFDGETEVNPLFTV 786
            KGNL+FRVDNY+ ++ +  EI+LMDA GKPLLT+RRK+L+LGD+W+V+DGET +NP F+V
Sbjct: 60   KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119

Query: 785  KKQVNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 612
            KK V++LN + LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE     
Sbjct: 120  KKHVSILNKKCLAHVSQAAGSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGGV 179

Query: 611  XXXXXXFRLVVQPEMDSTVAMALVILLDQMCG 516
                  FRL+V PE+DS++AMA+VI+LDQM G
Sbjct: 180  AFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFG 211


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