BLASTX nr result

ID: Coptis23_contig00014495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014495
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig...    80   2e-13
ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein lig...    80   2e-13
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002334259.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002334258.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +1

Query: 127 GLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLI 258
           G  QSKDELLYQQV+YGN EGIKALCR+GA LEWIDKE KTPLI
Sbjct: 2   GQQQSKDELLYQQVSYGNTEGIKALCRDGAGLEWIDKEAKTPLI 45


>ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +1

Query: 127 GLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLI 258
           G  QSKDELLYQQV+YGN EGIKALCR+GA LEWIDKE KTPLI
Sbjct: 2   GQQQSKDELLYQQVSYGNTEGIKALCRDGAGLEWIDKEAKTPLI 45


>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/44 (86%), Positives = 38/44 (86%)
 Frame = +1

Query: 127 GLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLI 258
           G  QSKDELLYQQVN  N EGIK LCREGARLEWIDKEGKTPLI
Sbjct: 2   GQQQSKDELLYQQVNCSNIEGIKNLCREGARLEWIDKEGKTPLI 45


>ref|XP_002334259.1| predicted protein [Populus trichocarpa] gi|222870334|gb|EEF07465.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/44 (84%), Positives = 37/44 (84%)
 Frame = +1

Query: 127 GLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLI 258
           G  QSK ELLYQQV  GN EGIK LCREGARLEWIDKEGKTPLI
Sbjct: 2   GQQQSKHELLYQQVKNGNIEGIKKLCREGARLEWIDKEGKTPLI 45


>ref|XP_002334258.1| predicted protein [Populus trichocarpa] gi|222870333|gb|EEF07464.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/44 (84%), Positives = 37/44 (84%)
 Frame = +1

Query: 127 GLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLI 258
           G  QSK ELLYQQV  GN EGIK LCREGARLEWIDKEGKTPLI
Sbjct: 2   GQQQSKHELLYQQVKNGNIEGIKKLCREGARLEWIDKEGKTPLI 45


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