BLASTX nr result
ID: Coptis23_contig00014494
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014494
(228 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 147 1e-33
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 147 1e-33
gb|ABD61727.1| polyubiquitin [Lupinus albus] 147 1e-33
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 147 1e-33
ref|NP_001148453.1| LOC100282068 [Zea mays] gi|224059606|ref|XP_... 147 1e-33
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 150 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 209
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 210 TLTGKTITLEVESSD 224
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 226 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 285
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 286 TLTGKTITLEVESSD 300
Score = 124 bits (311), Expect = 8e-27
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 39 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKSITLEVE 218
GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK+ITLEVE
Sbjct: 86 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 145
Query: 219 SSD 227
SSD
Sbjct: 146 SSD 148
Score = 110 bits (274), Expect = 2e-22
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 302 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 355
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1|
Ubiquitin [Medicago truncatula]
Length = 533
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 82
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 83 TLTGKTITLEVESSD 97
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 99 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 159 TLTGKTITLEVESSD 173
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 175 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 234
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 235 TLTGKTITLEVESSD 249
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 310
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 311 TLTGKTITLEVESSD 325
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 403 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 462
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 463 TLTGKTITLEVESSD 477
Score = 143 bits (360), Expect = 2e-32
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 327 IDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 386
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 387 TLTGKTITLEVESSD 401
Score = 110 bits (274), Expect = 2e-22
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 479 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
>gb|ABD61727.1| polyubiquitin [Lupinus albus]
Length = 132
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 57 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 116
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 117 TLTGKTITLEVESSD 131
Score = 107 bits (266), Expect = 1e-21
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 63 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKSITLEVESSD 227
LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK+ITLEVESSD
Sbjct: 1 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 55
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 59 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 118
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 119 TLTGKTITLEVESSD 133
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 135 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 194
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 195 TLTGKTITLEVESSD 209
Score = 110 bits (276), Expect = 9e-23
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +3
Query: 57 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKSITLEVESSD 227
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK+ITLEVESSD
Sbjct: 1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 57
Score = 108 bits (270), Expect = 5e-22
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 211 IDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 264
>ref|NP_001148453.1| LOC100282068 [Zea mays] gi|224059606|ref|XP_002299930.1| predicted
protein [Populus trichocarpa]
gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago
truncatula] gi|902586|gb|AAC49014.1| ubiquitin [Zea
mays] gi|195619382|gb|ACG31521.1| polyubiquitin
containing 7 ubiquitin monomers [Zea mays]
gi|222847188|gb|EEE84735.1| predicted protein [Populus
trichocarpa] gi|238013752|gb|ACR37911.1| unknown [Zea
mays] gi|355508726|gb|AES89868.1| Ubiquitin [Medicago
truncatula] gi|413926508|gb|AFW66440.1| putative
ubiquitin family protein isoform 1 [Zea mays]
gi|413926509|gb|AFW66441.1| putative ubiquitin family
protein isoform 2 [Zea mays]
Length = 381
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 82
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 83 TLTGKTITLEVESSD 97
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 99 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 159 TLTGKTITLEVESSD 173
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 175 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 234
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 235 TLTGKTITLEVESSD 249
Score = 147 bits (370), Expect = 1e-33
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 182
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 251 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 310
Query: 183 TLTGKSITLEVESSD 227
TLTGK+ITLEVESSD
Sbjct: 311 TLTGKTITLEVESSD 325
Score = 110 bits (274), Expect = 2e-22
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +3
Query: 3 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 327 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380