BLASTX nr result

ID: Coptis23_contig00014489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014489
         (1958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277472.1| PREDICTED: F-box/kelch-repeat protein At1g30...   305   4e-80
ref|XP_003546081.1| PREDICTED: F-box/kelch-repeat protein At1g30...   297   6e-78
ref|XP_003593908.1| F-box/kelch-repeat protein [Medicago truncat...   296   1e-77
ref|XP_002309296.1| predicted protein [Populus trichocarpa] gi|2...   296   2e-77
ref|XP_004163017.1| PREDICTED: F-box/kelch-repeat protein At1g30...   291   3e-76

>ref|XP_002277472.1| PREDICTED: F-box/kelch-repeat protein At1g30090 [Vitis vinifera]
            gi|147822560|emb|CAN75078.1| hypothetical protein
            VITISV_005005 [Vitis vinifera]
          Length = 405

 Score =  305 bits (780), Expect = 4e-80
 Identities = 144/208 (69%), Positives = 167/208 (80%)
 Frame = +2

Query: 740  SFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMACYDAAVHNGKL 919
            SFFA G+IDGM+Y AGGNSSDLFEL+ A+VLDP+KG W PIASMG NMA YDAAV NGKL
Sbjct: 197  SFFATGVIDGMIYAAGGNSSDLFELDLAEVLDPVKGIWSPIASMGTNMASYDAAVLNGKL 256

Query: 920  LVTEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLK 1099
            LVTEGWLWPF  SPRGQVYDPR N WE M+A LREGWTG S VV GHLFVVSEHERMKLK
Sbjct: 257  LVTEGWLWPFFVSPRGQVYDPRTNNWENMAAGLREGWTGSSVVVYGHLFVVSEHERMKLK 316

Query: 1100 VYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKE 1279
            VYD+++D+WE V G  +PEQI KPFSVN+ D +I+VVG NLHVA+GH+ +L+ K    K 
Sbjct: 317  VYDMESDNWETVEGPALPEQICKPFSVNACDCKIYVVGRNLHVAVGHIWRLNQKGNCEKN 376

Query: 1280 WCFFVEWKIVNAPKTLCGWSPASSQVLF 1363
            W F V W +V+AP+     +P+SSQVLF
Sbjct: 377  WSFGVRWHVVDAPEAFADLTPSSSQVLF 404



 Score =  208 bits (529), Expect = 5e-51
 Identities = 96/156 (61%), Positives = 111/156 (71%)
 Frame = +1

Query: 184 MQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 363
           MQ VR S  QAPV KLGDS+MTLSPKFR+A                             D
Sbjct: 1   MQRVRISSQQAPVHKLGDSQMTLSPKFRLAVIQSNLLNPSLELELSLRGEPLIPGLP--D 58

Query: 364 DVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSK 543
           D+AL+CLLRLPV+SH +CR VCKRWHLLLG KERFF+RRKELG+QDPWLF+  + KCT K
Sbjct: 59  DIALNCLLRLPVQSHAACRAVCKRWHLLLGNKERFFTRRKELGFQDPWLFVFAFHKCTGK 118

Query: 544 IQWQVLDLTNLSWHTIPLMPCKERICPHGFRCISTP 651
           IQWQVLDL + SWHTIP MPCK+++CPHGFRC+S P
Sbjct: 119 IQWQVLDLNHFSWHTIPAMPCKDKVCPHGFRCVSIP 154


>ref|XP_003546081.1| PREDICTED: F-box/kelch-repeat protein At1g30090-like [Glycine max]
          Length = 405

 Score =  297 bits (761), Expect = 6e-78
 Identities = 139/208 (66%), Positives = 170/208 (81%)
 Frame = +2

Query: 740  SFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMACYDAAVHNGKL 919
            SFFA G+IDGM+YVAGGNS+DL+EL+SA+VLDP+ GSW+PIA+MG NMA YDAAV NGKL
Sbjct: 197  SFFASGVIDGMIYVAGGNSTDLYELDSAEVLDPLNGSWRPIANMGTNMASYDAAVLNGKL 256

Query: 920  LVTEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLK 1099
            LVTEGWLWPF  SPRGQVYDPR N WE M+  LREGWTG S VV GHLFVVSE ERMKLK
Sbjct: 257  LVTEGWLWPFYVSPRGQVYDPRTNNWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLK 316

Query: 1100 VYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKE 1279
            VYD +TDSWE + G P+PEQIRKPF+VN+ D  I+VVG NL V +GH+ +L+ K +  ++
Sbjct: 317  VYDPETDSWEAIEGLPLPEQIRKPFAVNACDCHIYVVGQNLVVGVGHITRLNPKESCKEK 376

Query: 1280 WCFFVEWKIVNAPKTLCGWSPASSQVLF 1363
            W F V W +++AP+++   +P+SSQVLF
Sbjct: 377  WNFSVRWHVIDAPESVSDLTPSSSQVLF 404



 Score =  203 bits (517), Expect = 1e-49
 Identities = 94/156 (60%), Positives = 109/156 (69%)
 Frame = +1

Query: 184 MQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 363
           MQ VRFS  QAPV KLGD +MTLSPKFR+A                             D
Sbjct: 1   MQRVRFSSQQAPVHKLGDPQMTLSPKFRLAVIQSSLANPSPELELSLREEPLIPGLP--D 58

Query: 364 DVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSK 543
           DVAL+CLLRLPV+SH SCR VCKRWH+LLG KERFF+ RK+ G +DPWLF+  Y KCT K
Sbjct: 59  DVALNCLLRLPVQSHSSCRAVCKRWHMLLGNKERFFTNRKQFGLKDPWLFVFAYHKCTGK 118

Query: 544 IQWQVLDLTNLSWHTIPLMPCKERICPHGFRCISTP 651
           I+WQVLDLT+ SWHTIP MPCK+++CPHGFRC+S P
Sbjct: 119 IKWQVLDLTHFSWHTIPAMPCKDKVCPHGFRCVSIP 154


>ref|XP_003593908.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355482956|gb|AES64159.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 405

 Score =  296 bits (759), Expect = 1e-77
 Identities = 141/208 (67%), Positives = 170/208 (81%)
 Frame = +2

Query: 740  SFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMACYDAAVHNGKL 919
            SFFA G+IDGMVY AGGNS+DL+EL+SA+VLDPI G+W+ IA+MG NMA YDAAV NGKL
Sbjct: 197  SFFASGVIDGMVYAAGGNSTDLYELDSAEVLDPISGNWRAIANMGTNMASYDAAVLNGKL 256

Query: 920  LVTEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLK 1099
            LVTEGWLWPF  SPRGQVYDPR N WETM+  LREGWTG S VV GHLFVVSE ERMKLK
Sbjct: 257  LVTEGWLWPFYVSPRGQVYDPRTNSWETMAVGLREGWTGSSVVVYGHLFVVSELERMKLK 316

Query: 1100 VYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKE 1279
            VY+ + DSWE + GSP+PEQI KPF+VN+ D +I+VVG NL VA+GH+ KL+ K +  ++
Sbjct: 317  VYNQEADSWEAIDGSPLPEQICKPFAVNACDCQIYVVGRNLLVAVGHISKLNPKESCKEK 376

Query: 1280 WCFFVEWKIVNAPKTLCGWSPASSQVLF 1363
            W F V+W ++ APK+L   +P+SSQVLF
Sbjct: 377  WNFGVQWHVIEAPKSLSNLTPSSSQVLF 404



 Score =  207 bits (527), Expect = 8e-51
 Identities = 95/156 (60%), Positives = 111/156 (71%)
 Frame = +1

Query: 184 MQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 363
           MQ VRFS  QAPV KLGD +MTLSPKFR+A                             D
Sbjct: 1   MQRVRFSSQQAPVHKLGDPQMTLSPKFRLAVVQSNLTSQMPELDHSLREELLIPGLP--D 58

Query: 364 DVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSK 543
           DVAL+CLLRLPV+SH SCR VCKRWH+LLG KERFF+ RK++G++DPWLF+  Y KCT K
Sbjct: 59  DVALNCLLRLPVQSHSSCRAVCKRWHMLLGNKERFFTNRKQMGFKDPWLFVFAYHKCTGK 118

Query: 544 IQWQVLDLTNLSWHTIPLMPCKERICPHGFRCISTP 651
           IQWQVLDLT+ SWHTIP MPCK+++CPHGFRC+S P
Sbjct: 119 IQWQVLDLTHFSWHTIPAMPCKDKVCPHGFRCVSMP 154


>ref|XP_002309296.1| predicted protein [Populus trichocarpa] gi|222855272|gb|EEE92819.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  296 bits (757), Expect = 2e-77
 Identities = 137/208 (65%), Positives = 168/208 (80%)
 Frame = +2

Query: 740  SFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMACYDAAVHNGKL 919
            SFFA G+I+GM+YVAGGNSSDLFEL+SA+VLDP+KG+W+ IA+MG NMA YDAAV +GKL
Sbjct: 197  SFFASGVIEGMIYVAGGNSSDLFELDSAEVLDPVKGNWRRIANMGTNMASYDAAVLDGKL 256

Query: 920  LVTEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLK 1099
            LVTEGWLWPF FSPRGQ+YDPR + WE M+  LREGWTG S VV G LFVVS+ ERMKLK
Sbjct: 257  LVTEGWLWPFFFSPRGQIYDPRTDKWENMAFGLREGWTGSSVVVYGRLFVVSDLERMKLK 316

Query: 1100 VYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKE 1279
            VYD ++DSWE + GSP+PEQI KPF+VN+ D +I+VVG NLHV +GH+ +L  K    K+
Sbjct: 317  VYDAESDSWETIEGSPLPEQISKPFAVNAWDCKIYVVGRNLHVVVGHISRLQQKGICEKK 376

Query: 1280 WCFFVEWKIVNAPKTLCGWSPASSQVLF 1363
            W F V W +V+ P + C  +P+SSQVLF
Sbjct: 377  WGFSVRWHVVDPPDSFCDLTPSSSQVLF 404



 Score =  201 bits (511), Expect = 6e-49
 Identities = 92/154 (59%), Positives = 109/154 (70%)
 Frame = +1

Query: 184 MQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 363
           MQ VR S  QAPV KLGDS++TLSPKFRV                              D
Sbjct: 1   MQRVRLSSQQAPVHKLGDSQITLSPKFRVGVIQSSLLNPSPEFESSLQCEPLIPGLP--D 58

Query: 364 DVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSK 543
           D+AL+CLLR+PV+SH +C+ VCKRWHLLLG KERFF+RRKELG++DPWLF+ ++ KCT K
Sbjct: 59  DIALNCLLRVPVQSHAACKAVCKRWHLLLGNKERFFTRRKELGFKDPWLFVFSFHKCTGK 118

Query: 544 IQWQVLDLTNLSWHTIPLMPCKERICPHGFRCIS 645
           IQWQVLDL N SWHTIP MPCK ++CPHGFRC+S
Sbjct: 119 IQWQVLDLINFSWHTIPAMPCKHKVCPHGFRCVS 152


>ref|XP_004163017.1| PREDICTED: F-box/kelch-repeat protein At1g30090-like, partial
            [Cucumis sativus]
          Length = 290

 Score =  291 bits (746), Expect = 3e-76
 Identities = 140/208 (67%), Positives = 164/208 (78%)
 Frame = +2

Query: 740  SFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMACYDAAVHNGKL 919
            SFFA G+IDG +YVAGGNS+DLFEL+SA+VLDPI+G+W  IASMG NMA YDAAV NGKL
Sbjct: 82   SFFASGVIDGKIYVAGGNSTDLFELDSAEVLDPIQGNWNSIASMGTNMASYDAAVLNGKL 141

Query: 920  LVTEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLK 1099
            LVTEGWLWPF  +PRGQVYDP  N WETM+  LREGWTG S VV GHLFVVSE ERMKLK
Sbjct: 142  LVTEGWLWPFYVAPRGQVYDPTTNNWETMAIGLREGWTGSSVVVYGHLFVVSELERMKLK 201

Query: 1100 VYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKE 1279
            VYD  +DSWE + G P+PEQI KPF+VN+ DS I+VVG NLHVA+G + +L  K T   +
Sbjct: 202  VYDAASDSWEAIEGPPLPEQICKPFAVNACDSTIYVVGRNLHVAVGRISQLIKKGTCENK 261

Query: 1280 WCFFVEWKIVNAPKTLCGWSPASSQVLF 1363
            W F V W +V+AP+     +P+SSQVLF
Sbjct: 262  WSFNVSWHVVDAPECFSDLTPSSSQVLF 289



 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +1

Query: 535 TSKIQWQVLDLTNLSWHTIPLMPCKERICPHGFRCISTP 651
           T KIQWQVLDLT+ SWH+IPLMPCK+++CPHGFRC+S P
Sbjct: 1   TGKIQWQVLDLTHFSWHSIPLMPCKDKVCPHGFRCVSIP 39


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