BLASTX nr result
ID: Coptis23_contig00014464
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014464
(732 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-contai... 139 7e-32
emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera] 139 7e-32
emb|CBI19798.3| unnamed protein product [Vitis vinifera] 125 7e-32
ref|XP_002300731.1| predicted protein [Populus trichocarpa] gi|2... 123 6e-30
ref|XP_004164050.1| PREDICTED: uncharacterized TPR repeat-contai... 135 9e-30
>ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like [Vitis vinifera]
Length = 799
Score = 125 bits (315), Expect(2) = 7e-32
Identities = 69/139 (49%), Positives = 83/139 (59%), Gaps = 14/139 (10%)
Frame = +2
Query: 56 CSCPPDKRKRIAFDALLWRPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMSEIHGEA 235
C PDKRKR+A+DALLWRPVNE +Q+R+ADAL YIKLLR +YIPSHG SEM E+HGEA
Sbjct: 626 CGGSPDKRKRVAYDALLWRPVNEGSAQIRKADALKYIKLLRAIYIPSHGVSEMLEVHGEA 685
Query: 236 DXXXXXXXXXXXXXMIRIGVLES*PLW*SLKQGIGLGMVIML--------------ACSV 373
D + ++ P W G G++ L ACSV
Sbjct: 686 D--------VSMVSLSEFLLMFDDPDW-------GFGIMSSLVKLETGDRTRHGRYACSV 730
Query: 374 CHYPVIGSRFKEMKSHYIL 430
C YP+IGSRFKEMKSH+ L
Sbjct: 731 CRYPIIGSRFKEMKSHFSL 749
Score = 37.7 bits (86), Expect(2) = 7e-32
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 3 SVLDASGSGRVDLGMFFVVLA 65
SVLD +GSGRVDLGMFF VLA
Sbjct: 603 SVLDETGSGRVDLGMFFSVLA 623
Score = 139 bits (350), Expect = 6e-31
Identities = 68/110 (61%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Frame = +1
Query: 259 EFVVMFDDSDWGFGIMTTMVKLETGDRTRHGHHAGLLCVPLSRYWVT-LQGDEISLYFSL 435
EF++MFDD DWGFGIM+++VKLETGDRTRHG +A +C RY + + E+ +FSL
Sbjct: 694 EFLLMFDDPDWGFGIMSSLVKLETGDRTRHGRYACSVC----RYPIIGSRFKEMKSHFSL 749
Query: 436 CNQCYSEGKVASSCK*EEYKFKEYGSEAEAVKDKCMIFSLHLKNNSENDP 585
CNQCYSEGKV S+ K EEY+FKEYGSE+EA+KDKC+ F+L K++S NDP
Sbjct: 750 CNQCYSEGKVPSTFKQEEYRFKEYGSESEAMKDKCLCFNLQSKSSSYNDP 799
>emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera]
Length = 799
Score = 125 bits (315), Expect(2) = 7e-32
Identities = 69/139 (49%), Positives = 83/139 (59%), Gaps = 14/139 (10%)
Frame = +2
Query: 56 CSCPPDKRKRIAFDALLWRPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMSEIHGEA 235
C PDKRKR+A+DALLWRPVNE +Q+R+ADAL YIKLLR +YIPSHG SEM E+HGEA
Sbjct: 626 CGGSPDKRKRVAYDALLWRPVNEGSAQIRKADALKYIKLLRAIYIPSHGVSEMLEVHGEA 685
Query: 236 DXXXXXXXXXXXXXMIRIGVLES*PLW*SLKQGIGLGMVIML--------------ACSV 373
D + ++ P W G G++ L ACSV
Sbjct: 686 D--------VSMVSLSEFLLMFDDPDW-------GFGIMSSLVKLETGDRTRHGRYACSV 730
Query: 374 CHYPVIGSRFKEMKSHYIL 430
C YP+IGSRFKEMKSH+ L
Sbjct: 731 CRYPIIGSRFKEMKSHFSL 749
Score = 37.7 bits (86), Expect(2) = 7e-32
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 3 SVLDASGSGRVDLGMFFVVLA 65
SVLD +GSGRVDLGMFF VLA
Sbjct: 603 SVLDETGSGRVDLGMFFSVLA 623
Score = 139 bits (350), Expect = 6e-31
Identities = 68/110 (61%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Frame = +1
Query: 259 EFVVMFDDSDWGFGIMTTMVKLETGDRTRHGHHAGLLCVPLSRYWVT-LQGDEISLYFSL 435
EF++MFDD DWGFGIM+++VKLETGDRTRHG +A +C RY + + E+ +FSL
Sbjct: 694 EFLLMFDDPDWGFGIMSSLVKLETGDRTRHGRYACSVC----RYPIIGSRFKEMKSHFSL 749
Query: 436 CNQCYSEGKVASSCK*EEYKFKEYGSEAEAVKDKCMIFSLHLKNNSENDP 585
CNQCYSEGKV S+ K EEY+FKEYGSE+EA+KDKC+ F+L K++S NDP
Sbjct: 750 CNQCYSEGKVPSTFKQEEYRFKEYGSESEAMKDKCLCFNLQSKSSSYNDP 799
>emb|CBI19798.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 125 bits (315), Expect(2) = 7e-32
Identities = 69/139 (49%), Positives = 83/139 (59%), Gaps = 14/139 (10%)
Frame = +2
Query: 56 CSCPPDKRKRIAFDALLWRPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMSEIHGEA 235
C PDKRKR+A+DALLWRPVNE +Q+R+ADAL YIKLLR +YIPSHG SEM E+HGEA
Sbjct: 573 CGGSPDKRKRVAYDALLWRPVNEGSAQIRKADALKYIKLLRAIYIPSHGVSEMLEVHGEA 632
Query: 236 DXXXXXXXXXXXXXMIRIGVLES*PLW*SLKQGIGLGMVIML--------------ACSV 373
D + ++ P W G G++ L ACSV
Sbjct: 633 D--------VSMVSLSEFLLMFDDPDW-------GFGIMSSLVKLETGDRTRHGRYACSV 677
Query: 374 CHYPVIGSRFKEMKSHYIL 430
C YP+IGSRFKEMKSH+ L
Sbjct: 678 CRYPIIGSRFKEMKSHFSL 696
Score = 37.7 bits (86), Expect(2) = 7e-32
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 3 SVLDASGSGRVDLGMFFVVLA 65
SVLD +GSGRVDLGMFF VLA
Sbjct: 550 SVLDETGSGRVDLGMFFSVLA 570
Score = 125 bits (314), Expect = 9e-27
Identities = 61/96 (63%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Frame = +1
Query: 259 EFVVMFDDSDWGFGIMTTMVKLETGDRTRHGHHAGLLCVPLSRYWVT-LQGDEISLYFSL 435
EF++MFDD DWGFGIM+++VKLETGDRTRHG +A +C RY + + E+ +FSL
Sbjct: 641 EFLLMFDDPDWGFGIMSSLVKLETGDRTRHGRYACSVC----RYPIIGSRFKEMKSHFSL 696
Query: 436 CNQCYSEGKVASSCK*EEYKFKEYGSEAEAVKDKCM 543
CNQCYSEGKV S+ K EEY+FKEYGSE+EA+KDKC+
Sbjct: 697 CNQCYSEGKVPSTFKQEEYRFKEYGSESEAMKDKCL 732
>ref|XP_002300731.1| predicted protein [Populus trichocarpa] gi|222842457|gb|EEE80004.1|
predicted protein [Populus trichocarpa]
Length = 797
Score = 123 bits (308), Expect(2) = 6e-30
Identities = 71/156 (45%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Frame = +2
Query: 56 CSCPPDKRKRIAFDALLWRPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMSEIHGEA 235
CS P+KRKR+AFDALLWRPV+ES SQ++ ADA+T+IK LR +Y+PSHG SEM E+HGEA
Sbjct: 628 CSGNPEKRKRVAFDALLWRPVSESGSQIKAADAVTFIKFLRAIYVPSHGVSEMLEVHGEA 687
Query: 236 DXXXXXXXXXXXXXMIRIGVLES*PLW*SLKQGIGLGMVIM------------LACSVCH 379
D V+ P W G G+ +M CSVC
Sbjct: 688 DSSMVSFKEFL--------VMFDDPDW-----GFGIMSTLMKLESGDRNRHGHYVCSVCR 734
Query: 380 YPVIGSRFKEMKSHYILACVINVTVKERWHPPASRK 487
YP+IGSRFKE+KSH+ L N E PPA ++
Sbjct: 735 YPIIGSRFKEIKSHFSLC---NQCYSEGKVPPAFKQ 767
Score = 33.9 bits (76), Expect(2) = 6e-30
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 3 SVLDASGSGRVDLGMFFVVLA 65
SV D +G GRVDLGMF+ +LA
Sbjct: 605 SVFDETGQGRVDLGMFYAILA 625
Score = 123 bits (309), Expect = 3e-26
Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Frame = +1
Query: 259 EFVVMFDDSDWGFGIMTTMVKLETGDRTRHGHHAGLLCVPLSRYWVT-LQGDEISLYFSL 435
EF+VMFDD DWGFGIM+T++KLE+GDR RHGH+ +C RY + + EI +FSL
Sbjct: 696 EFLVMFDDPDWGFGIMSTLMKLESGDRNRHGHYVCSVC----RYPIIGSRFKEIKSHFSL 751
Query: 436 CNQCYSEGKVASSCK*EEYKFKEYGSEAEAVKDKCMIFSLHLKNN 570
CNQCYSEGKV + K +EY FKEYGSEAEA+KDKC L N+
Sbjct: 752 CNQCYSEGKVPPAFKQDEYIFKEYGSEAEAMKDKCTCLPLQSHND 796
>ref|XP_004164050.1| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like [Cucumis sativus]
Length = 798
Score = 135 bits (340), Expect = 9e-30
Identities = 66/106 (62%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +1
Query: 259 EFVVMFDDSDWGFGIMTTMVKLETGDRTRHGHHAGLLCVPLSRYWVT-LQGDEISLYFSL 435
EF+VMF+DSDWGFGIM+T++KLE GDR RHG+H +C RY + + EI +FSL
Sbjct: 697 EFLVMFNDSDWGFGIMSTLLKLEAGDRNRHGNHVCSVC----RYPIIGSRFKEIKSHFSL 752
Query: 436 CNQCYSEGKVASSCK*EEYKFKEYGSEAEAVKDKCMIFSLHLKNNS 573
CNQCYSEGKV SCK EEY+FKEYGSE EAVKDKC FS+ +++S
Sbjct: 753 CNQCYSEGKVPPSCKQEEYRFKEYGSEGEAVKDKCFCFSMQSRDDS 798
Score = 103 bits (257), Expect(2) = 2e-25
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 12/156 (7%)
Frame = +2
Query: 56 CSCPPDKRKRIAFDALLWRPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMSEIHGEA 235
C+ P +KRKR+A+DAL+WRPVN+ +Q+R+ DA+ YIKLLR +Y+P+ +SE+ E+HG+
Sbjct: 629 CTGPTEKRKRVAYDALVWRPVNDGGTQIRKFDAVRYIKLLRSIYVPTQRSSEILEVHGQT 688
Query: 236 DXXXXXXXXXXXXXMIRIGVLES*PLW*SLKQGIGLGMVIML------------ACSVCH 379
D + E ++ G G+ ++ CSVC
Sbjct: 689 DNSI-------------VSFTEFLVMFNDSDWGFGIMSTLLKLEAGDRNRHGNHVCSVCR 735
Query: 380 YPVIGSRFKEMKSHYILACVINVTVKERWHPPASRK 487
YP+IGSRFKE+KSH+ L N E PP+ ++
Sbjct: 736 YPIIGSRFKEIKSHFSLC---NQCYSEGKVPPSCKQ 768
Score = 38.5 bits (88), Expect(2) = 2e-25
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 3 SVLDASGSGRVDLGMFFVVLA 65
SVLD SGSGRVDLG+FF VLA
Sbjct: 606 SVLDESGSGRVDLGLFFAVLA 626