BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014461
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   134   3e-29
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...   134   4e-29
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   134   4e-29
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   133   7e-29
ref|NP_176127.1| F-box protein [Arabidopsis thaliana] gi|3740953...   125   2e-26

>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
            Full=F-box/LRR-repeat protein At4g14096
            gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
            thaliana] gi|22136112|gb|AAM91134.1| unknown protein
            [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
            F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score =  134 bits (338), Expect = 3e-29
 Identities = 98/287 (34%), Positives = 149/287 (51%), Gaps = 16/287 (5%)
 Frame = -1

Query: 1064 PTKYAVGSSVLSTKWKYLWTSVPKLELSDSLLYSTKIKSGDPMVKASFMNFVDRVLLLHE 885
            PTK A  +SVLS KW+YL+  VP L+L +S+  + +    +  V +SFM+FVDRVL L  
Sbjct: 26   PTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPE---NETEVSSSFMDFVDRVLALQG 82

Query: 884  ASSIHKFSLECAEAYDVTRFNAWISAVLKRNVQELILSVCMD-PFVFPLCLFNCQSLTTL 708
             S +HKFSL+  +  +  R   WI+ VL+R V +L L V M+  FVFP  +F  ++L  L
Sbjct: 83   NSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMETEFVFPSEMFLSKTLVRL 142

Query: 707  KIDVGSACFWSPTSMCFPKLKVLNLKDVIF-CGDLSIQQAFFSFPVLEEFHAYSIEWEKF 531
            K+ +     +    +  PKLK L +    F    + + +     P+LE+     I W  +
Sbjct: 143  KLMLYPLLEFE--DVYLPKLKTLYIDSCYFEKYGIGLTKLLSGCPILEDLVLDDIPWCTW 200

Query: 530  NTVNISAPALKKL-----ILDVFDDSYTVEDCKINIYAESLIYLELASQLAYWYNLHNLS 366
            +  ++S P LK+L     + D F  S       ++I   +L+YL+    +A  Y   N  
Sbjct: 201  DFASVSVPTLKRLTFSTQVRDEFPKS-------VSIDTPNLVYLKFTDTVAGKYPKVNFD 253

Query: 365  SLVEARIDCKF--GHNYH-------RISKFFGKICNVKVLHLSIHTI 252
            SLVEA ID +   GH  +         + F  +ICNVK L+LS +T+
Sbjct: 254  SLVEAHIDLRLLQGHQGYGENDMVGNATDFIMRICNVKTLYLSSNTL 300


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
            [Arabidopsis thaliana]
          Length = 443

 Score =  134 bits (337), Expect = 4e-29
 Identities = 97/292 (33%), Positives = 148/292 (50%), Gaps = 21/292 (7%)
 Frame = -1

Query: 1064 PTKYAVGSSVLSTKWKYLWTSVPKLELSDSLLYSTKIKSGDPMVKASFMNFVDRVLLLHE 885
            PTK A  +SVLS KW+YL+  VP L+L DS+  + +    +  +  SFM+FVDRVL L  
Sbjct: 26   PTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPE---NETEISTSFMDFVDRVLALQG 82

Query: 884  ASSIHKFSLECAEAYDVTRFNAWISAVLKRNVQELILSVCMD-PFVFPLCLFNCQSLTTL 708
             S +HKFSL+  +  D  R   WI+ VL+R V +L L + ++  F+ P  ++ C++L  L
Sbjct: 83   NSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESEFLLPSQVYLCKTLVWL 142

Query: 707  KIDVGSACFWSPTSMCFPKLKVLNLKDVIF-CGDLSIQQAFFSFPVLEEFHAYSIEWEKF 531
            K+  G         +  PKLK L ++   F    + + +     P+LE+     I W  +
Sbjct: 143  KLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLSGCPMLEDLVLDDISWFIW 202

Query: 530  NTVNISAPALKKLIL-----DVFDDSYTVEDCKINIYAESLIYLELASQLAYWYNLHNLS 366
            +  ++S P LK+L       D F  S  ++         +L+YL+    +A  Y   NL 
Sbjct: 203  DFASVSVPTLKRLRFSWQERDEFPKSVLLD-------TPNLVYLKFTDTVAGKYPKVNLD 255

Query: 365  SLVEARIDCKFGH----NYHR----------ISKFFGKICNVKVLHLSIHTI 252
            SLVEA ID +       NYH+           + F  +ICNVK L+LS +T+
Sbjct: 256  SLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNVKTLYLSANTL 307


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
            Full=F-box/LRR-repeat protein At4g14103
            gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
            thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
            protein [Arabidopsis thaliana]
          Length = 381

 Score =  134 bits (337), Expect = 4e-29
 Identities = 97/292 (33%), Positives = 148/292 (50%), Gaps = 21/292 (7%)
 Frame = -1

Query: 1064 PTKYAVGSSVLSTKWKYLWTSVPKLELSDSLLYSTKIKSGDPMVKASFMNFVDRVLLLHE 885
            PTK A  +SVLS KW+YL+  VP L+L DS+  + +    +  +  SFM+FVDRVL L  
Sbjct: 26   PTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPE---NETEISTSFMDFVDRVLALQG 82

Query: 884  ASSIHKFSLECAEAYDVTRFNAWISAVLKRNVQELILSVCMD-PFVFPLCLFNCQSLTTL 708
             S +HKFSL+  +  D  R   WI+ VL+R V +L L + ++  F+ P  ++ C++L  L
Sbjct: 83   NSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESEFLLPSQVYLCKTLVWL 142

Query: 707  KIDVGSACFWSPTSMCFPKLKVLNLKDVIF-CGDLSIQQAFFSFPVLEEFHAYSIEWEKF 531
            K+  G         +  PKLK L ++   F    + + +     P+LE+     I W  +
Sbjct: 143  KLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLSGCPMLEDLVLDDISWFIW 202

Query: 530  NTVNISAPALKKLIL-----DVFDDSYTVEDCKINIYAESLIYLELASQLAYWYNLHNLS 366
            +  ++S P LK+L       D F  S  ++         +L+YL+    +A  Y   NL 
Sbjct: 203  DFASVSVPTLKRLRFSWQERDEFPKSVLLD-------TPNLVYLKFTDTVAGKYPKVNLD 255

Query: 365  SLVEARIDCKFGH----NYHR----------ISKFFGKICNVKVLHLSIHTI 252
            SLVEA ID +       NYH+           + F  +ICNVK L+LS +T+
Sbjct: 256  SLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNVKTLYLSANTL 307


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  133 bits (335), Expect = 7e-29
 Identities = 106/290 (36%), Positives = 152/290 (52%), Gaps = 23/290 (7%)
 Frame = -1

Query: 1064 PTKYAVGSSVLSTKWKYLWTSVPKLELSDSLLY--STKIKSGDPMVKASFMNFVDRVLLL 891
            PTK+AVG+S+LS +W+YLW SVP L+  D L    ST ++  + ++   F NFVD VL  
Sbjct: 28   PTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELEERII--MFQNFVDGVLRH 85

Query: 890  HEASSIHKFSLECAEAYDVTRFNAWISAVLKRNVQELILSVCMDPFV-FPLCLFNCQSLT 714
             E S I KF L   +  ++    +WI   L+R VQEL L + +D  V  P   F C++L 
Sbjct: 86   SEVSCIKKFRLGYRD-NNLDSVYSWICIALERRVQELDLHLLIDWRVELPPMFFICKTLV 144

Query: 713  TLKIDVGSACFWS-PTSMCFPKLKVLNLKDVIFCGDLSIQQAFFSFPVLEEFHAYSIEWE 537
             +K+    A F   PT++  P LK L+LK V +  D SIQ+     PVLEE      E +
Sbjct: 145  VVKL--SCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERD 202

Query: 536  KFNTVNISAPALKKLILDVFDDSYT------VEDCKINIYAESLIYLELASQLAYWYNLH 375
                VN+S P+LK L +  F D +        +D K+ + A +L YL +   L+  Y + 
Sbjct: 203  NQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVK 262

Query: 374  NLSSLVEARIDCK------------FGHNYH-RISKFFGKICNVKVLHLS 264
            +L SLV+A ID +             G +YH  I +  G+I NVK L L+
Sbjct: 263  DLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVKCLSLT 312


>ref|NP_176127.1| F-box protein [Arabidopsis thaliana]
            gi|374095392|sp|Q9LQC1.2|FB65_ARATH RecName:
            Full=Putative F-box protein At1g58310
            gi|332195413|gb|AEE33534.1| F-box protein [Arabidopsis
            thaliana]
          Length = 505

 Score =  125 bits (313), Expect = 2e-26
 Identities = 91/306 (29%), Positives = 144/306 (47%), Gaps = 36/306 (11%)
 Frame = -1

Query: 1061 TKYAVGSSVLSTKWKYLWTSVPKLELSDSLL--------------YSTKIKSGDPMVKAS 924
            TK A  +SVL+ KW+YL+ SVP L+  DS+               Y   I      +  S
Sbjct: 27   TKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKRNPAVSGEDYLKMINERSDQLSTS 86

Query: 923  FMNFVDRVLLLHEASSIHKFSLECAEAYDVTRFNAWISAVLKRNVQELILSVCMD-PFVF 747
            FM+FVD+VL L + S +HKFSL+  +  D+ R   WI  VL+R V +L L + +      
Sbjct: 87   FMDFVDQVLRLQDNSPLHKFSLKIRDCVDIVRIICWILKVLERGVSDLELDMHLKWKSSL 146

Query: 746  PLCLFNCQSLTTLKIDVGSACFWSPTSMCFPKLKVLNLKDVIF-CGDLSIQQAFFSFPVL 570
            P  +F  ++L  LK+ V    F     +  PKLK L++  V F    + + +      +L
Sbjct: 147  PSKIFLSETLVRLKLSVERGPFIDVEDVHLPKLKTLHIVSVKFEKHGIGLNKLLSGCHIL 206

Query: 569  EEFHAYSIEWEKFNTVNISAPALKKLIL--DVFDDSYTVEDCKINIYAESLIYLELASQL 396
            EE +   I W  ++ V++S   LK+L    +V  D   +    ++    +L+YL     +
Sbjct: 207  EELNLEYISWCLWDFVSVSLTTLKRLTFCGEVMQDENPI---SVSFNTPNLVYLMFTDAI 263

Query: 395  AYWYNLHNLSSLVEARIDCKFGHNYHRISKFFGK------------------ICNVKVLH 270
            A  Y+  N  SLVEA I+ +   +    ++F                     ICNVK+L+
Sbjct: 264  ADEYSTVNFDSLVEAHINLQMSEDQVEQTRFSDSEGNMEGCMVANATELIMGICNVKILY 323

Query: 269  LSIHTI 252
            LS++T+
Sbjct: 324  LSVYTL 329