BLASTX nr result

ID: Coptis23_contig00014460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014460
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522998.1| Protein MOS2, putative [Ricinus communis] gi...    91   3e-16
ref|XP_003556598.1| PREDICTED: protein MOS2-like, partial [Glyci...    89   1e-15
ref|XP_003529331.1| PREDICTED: protein MOS2-like [Glycine max]         86   7e-15
ref|XP_003589709.1| Pre-mRNA-splicing factor spp2 [Medicago trun...    86   9e-15
ref|XP_002276861.1| PREDICTED: protein MOS2-like [Vitis vinifera]      85   1e-14

>ref|XP_002522998.1| Protein MOS2, putative [Ricinus communis]
           gi|223537810|gb|EEF39428.1| Protein MOS2, putative
           [Ricinus communis]
          Length = 479

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 27/150 (18%)
 Frame = +2

Query: 305 EFITEFNP-ETQTHQPNLIIQPLPNTWKXXXXXXXXXXXXXXXX---------------- 433
           +F+TEF+P +T T Q  +II P  N W+                                
Sbjct: 37  QFVTEFDPSKTLTKQNRIIIPPKENEWRPHKKMKNLALLPSLQSSDPDALRFEIATDADD 96

Query: 434 --------GLNIRPKKDMDVGKKPTNNV--ALELKLLEKFRADIKKFPDDKGLEEFIGVP 583
                   GLN+R   + D GK        + E  +LEK R D+++ P+D+G +EF  VP
Sbjct: 97  GDDKSMSYGLNVRAAGEDDGGKSQQQKKPESTENIMLEKLRYDLERLPEDRGFDEFKDVP 156

Query: 584 VNGYGKAVLAGYGWYEGRGIGKNAEGDVKV 673
           V G+G A+LAGYGW EGRGIG+NA+ DVKV
Sbjct: 157 VEGFGAALLAGYGWREGRGIGRNAKEDVKV 186


>ref|XP_003556598.1| PREDICTED: protein MOS2-like, partial [Glycine max]
          Length = 431

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 54/150 (36%), Positives = 71/150 (47%), Gaps = 29/150 (19%)
 Frame = +2

Query: 311 ITEFNPE--TQTHQPNLIIQPLPNTWKXXXXXXXXXXXXXXXX----------------- 433
           ITEF+P     T  P  +I P+ N W+                                 
Sbjct: 10  ITEFDPSKPAPTSAPKTLIPPIQNQWQPFKKMKNLHLPTAADAESLAFELHTDGDQPESD 69

Query: 434 ---GLNIRP-------KKDMDVGKKPTNNVALELKLLEKFRADIKKFPDDKGLEEFIGVP 583
              GLN+R         KD   G  P   V LE   L+K ++D+++ P+D+G+EEF  V 
Sbjct: 70  ISYGLNVRADKNPEGNNKDDSDGAAPRRRVPLEATALQKLKSDLERLPEDQGMEEFKDVA 129

Query: 584 VNGYGKAVLAGYGWYEGRGIGKNAEGDVKV 673
           V GYG A+LAGYGW EG GIG+NA+ DVKV
Sbjct: 130 VEGYGAALLAGYGWKEGMGIGRNAKEDVKV 159


>ref|XP_003529331.1| PREDICTED: protein MOS2-like [Glycine max]
          Length = 477

 Score = 85.9 bits (211), Expect = 7e-15
 Identities = 53/150 (35%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
 Frame = +2

Query: 311 ITEFNPE--TQTHQPNLIIQPLPNTWKXXXXXXXXXXXXXXXX----------------- 433
           ITEF+P     T  P  +I P+ N W+                                 
Sbjct: 55  ITEFDPSKPAPTSVPKTLIPPIQNQWQPFKKMKNLHLPTAADVESLAFELHTDGDQPESD 114

Query: 434 ---GLNIRP-------KKDMDVGKKPTNNVALELKLLEKFRADIKKFPDDKGLEEFIGVP 583
              GLN+R         KD      P   V LE   L+K ++D+++ P+D+G+EEF  V 
Sbjct: 115 ISYGLNVRADNNPEGNNKDDSDAAAPRRRVPLEATALQKLKSDLERLPEDQGMEEFKDVA 174

Query: 584 VNGYGKAVLAGYGWYEGRGIGKNAEGDVKV 673
           V GYG A+LAGYGW EG GIG+NA+ DVKV
Sbjct: 175 VEGYGAALLAGYGWKEGMGIGRNAKEDVKV 204


>ref|XP_003589709.1| Pre-mRNA-splicing factor spp2 [Medicago truncatula]
           gi|355478757|gb|AES59960.1| Pre-mRNA-splicing factor
           spp2 [Medicago truncatula]
          Length = 385

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
 Frame = +2

Query: 434 GLNIR-----PKKDMDVGKKPTNNVALELKLLEKFRADIKKFPDDKGLEEFIGVPVNGYG 598
           GLN+R     P+ D  V   P    ++E+ +L+KF+ D+++ PDD G +E+  VPV G+G
Sbjct: 35  GLNLRDNDKKPQSDDVVVDAPRPKASVEVSMLQKFKDDMERLPDDMGFDEYKDVPVEGFG 94

Query: 599 KAVLAGYGWYEGRGIGKNAEGDVKV 673
            A+L GYGW EG GIGKNA+ DVKV
Sbjct: 95  AALLGGYGWKEGMGIGKNAKEDVKV 119


>ref|XP_002276861.1| PREDICTED: protein MOS2-like [Vitis vinifera]
          Length = 422

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
 Frame = +2

Query: 434 GLNIRP--KKDMDVGKKPTNNVALELKLLEKFRADIKKFPDDKGLEEFIGVPVNGYGKAV 607
           GLNIR   K + +V      + ++E  LL+K + D+++ PDD+ LE+F  VPV G+G A+
Sbjct: 101 GLNIRENSKSENEVAAASHPDESVEATLLKKLKQDLRRLPDDQTLEDFAEVPVEGFGAAL 160

Query: 608 LAGYGWYEGRGIGKNAEGDVKV 673
           LAGYGW EGRGIG+NA+ DVK+
Sbjct: 161 LAGYGWTEGRGIGRNAKEDVKI 182


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