BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014449
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    64   2e-08
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    62   1e-07
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    59   6e-07
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    58   1e-06
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    57   3e-06

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 12/209 (5%)
 Frame = +1

Query: 40   RDLHLYSAVTSAGHNNNP---VVIVRSFGRKMLFFTRPGRDNKWIPIQGDD-MYRDVTLY 207
            +D+ +Y AV S+  ++     ++I   +GR  L FT+PG    W  ++ +     D+  +
Sbjct: 1059 KDIFIYKAVLSSAPSSPDCAVMIIYSDYGR--LAFTKPGHQT-WTLLESESGPVDDIIYF 1115

Query: 208  GGEFYALKLYGEVDV-------IKGLDXXXXXXXXXXXGLQCXXXXXXXXXXXXXXXXXX 366
             G F A+ L  EV +       +K +             ++                   
Sbjct: 1116 NGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRN 1175

Query: 367  XXXIRYKDDRVQSCMTTSFKVRKLDFVESKWVEVENLRDCALFVGFNNSFCVVASDFPGY 546
                  +D  +    T +F V KLD    +W EVENL  C+ F+G N+SF   ASD+P +
Sbjct: 1176 LYDTARRD--IPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEF 1233

Query: 547  RGNCIFFSVD-GGDCESCSGHDKGVFNIR 630
            R N I+F+ D  G        D G++N +
Sbjct: 1234 RKNSIYFTDDYCGFLNIPRNFDMGIYNFQ 1262


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
 Frame = +1

Query: 376 IRYKDDRVQSCMTTSFKVRKLDFVESKWVEVENLRDCALFVGFNNSFCVVASDFPGYRGN 555
           ++Y  +R     T  FKV KL+     W+EV+NL D  LF+G +++F   AS+  G +GN
Sbjct: 281 VQYMSER-----TVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGN 335

Query: 556 CIFF------SVDGGDCESCSGHDKGVFNI 627
           CIFF      S + GD  S  G D GVF +
Sbjct: 336 CIFFEDNFFYSREEGDDGSMIGRDIGVFEL 365


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
 Frame = +1

Query: 412 TTSFKVRKLDFVESKWVEVENLRDCALFVGFNNSFCVVASDFPGYRGNCIFF-------- 567
           T  FKV KLD     W+EV++L D  LF+G +++F    SD  G +GNCIFF        
Sbjct: 227 TVRFKVFKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFFVDNFFYSR 286

Query: 568 ----SVDGGDCESCSGHDKGVFNI 627
                 +GGD    +G D GVF++
Sbjct: 287 DENLRANGGDDGVLAGRDIGVFDL 310


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +1

Query: 412 TTSFKVRKLDFVESKWVEVENLRDCALFVGFNNSFCVVASDFPGYRGNCIFFSVD---GG 582
           T  F+V K+++    W  VE L +  LFVG N+S    ASDF G   +CI+F+ D     
Sbjct: 287 TVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESN 346

Query: 583 DCESCSGHDKGVFNIR 630
           D ++C  HD GVF +R
Sbjct: 347 DDDACGKHDLGVFRLR 362


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
 Frame = +1

Query: 412 TTSFKVRKLDFVESKWVEVENLRDCALFVGFNNSFCVVASDFPGYRGNCIFFSVD--GGD 585
           TT+FKV   DF + KW  ++N+++ AL +G N +  +    F G++ N I+F  D   G 
Sbjct: 291 TTTFKVYNFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDGFKSNHIYFLDDYKEGY 350

Query: 586 CESCSG-HDKGVFNIR 630
            E+  G HD GVFNI+
Sbjct: 351 FENTYGCHDMGVFNIK 366