BLASTX nr result

ID: Coptis23_contig00014441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014441
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16825.3| unnamed protein product [Vitis vinifera]              354   2e-95
ref|XP_002282147.1| PREDICTED: myosin heavy chain kinase B-like ...   354   2e-95
ref|XP_002314580.1| predicted protein [Populus trichocarpa] gi|2...   354   2e-95
ref|XP_003532807.1| PREDICTED: myosin heavy chain kinase B-like ...   342   1e-91
ref|XP_002515050.1| F-box and wd40 domain protein, putative [Ric...   335   2e-89

>emb|CBI16825.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  354 bits (909), Expect = 2e-95
 Identities = 186/307 (60%), Positives = 227/307 (73%), Gaps = 2/307 (0%)
 Frame = -3

Query: 974 NLSLQTLPSVPSLQNTLLDHTSPTIFLSYHCLFSFKPQTWPVIVSCLAISGKLLYAASGN 795
           +LSLQTLPSVPSLQ   L   +  + +S+ C+ + KP+  PV ++CLA+S   LYAASG 
Sbjct: 109 SLSLQTLPSVPSLQK--LSPEALNLSVSHLCVATLKPR--PVHINCLAVSADSLYAASGY 164

Query: 794 EINVFDLTNYTHLDXXXXXXXXXXXXXXSK--DGKVFTAHQDCKIRVWFHTSTKRHQQHQ 621
           +I+VFDL NY HLD                  DGK+FT+HQ+ KIRVW  T +KRHQ   
Sbjct: 165 QIHVFDLKNYAHLDAFNTDDSSSGSVKSLAFCDGKIFTSHQNGKIRVWQMTISKRHQ--- 221

Query: 620 HQLIATLPTVQDRLHRFVLPRNYVSIRRHKKRLWIDHVDAVSGLEVSNGLIYSVSWDKYL 441
             L+ATLPTV DRL  F+LP+NYVS+RRHKKRLWIDH DAVSGL VS+G I SVSWDK  
Sbjct: 222 --LVATLPTVNDRLRHFMLPKNYVSVRRHKKRLWIDHADAVSGLSVSDGFICSVSWDKCF 279

Query: 440 KIWSSKDLVCLESVKAHEDAVNALVVSKDGTVYTGSADTRIRVWAKAAVSFGDNKKQKRQ 261
           KIW + DL CLESVKAH+DAVNA+ +S +G +YTGSAD RI+VWAKA+           +
Sbjct: 280 KIWRASDLRCLESVKAHQDAVNAVAISGNGIIYTGSADCRIKVWAKAS---------GEK 330

Query: 260 RHRLIATLEKHKSAINALAISHDGSVLFSGACDRSILVWEREHSAHHMVVTGALRGHRGA 81
           RH ++ATLEKHKSA+NALA++ DGS+LFSGACDRSILVWERE SA+HMVVTGALRGH  A
Sbjct: 331 RHTVVATLEKHKSAVNALALTGDGSILFSGACDRSILVWEREDSANHMVVTGALRGHSKA 390

Query: 80  ILCLVNI 60
           ILCL+++
Sbjct: 391 ILCLISV 397


>ref|XP_002282147.1| PREDICTED: myosin heavy chain kinase B-like [Vitis vinifera]
          Length = 432

 Score =  354 bits (909), Expect = 2e-95
 Identities = 186/307 (60%), Positives = 227/307 (73%), Gaps = 2/307 (0%)
 Frame = -3

Query: 974 NLSLQTLPSVPSLQNTLLDHTSPTIFLSYHCLFSFKPQTWPVIVSCLAISGKLLYAASGN 795
           +LSLQTLPSVPSLQ   L   +  + +S+ C+ + KP+  PV ++CLA+S   LYAASG 
Sbjct: 61  SLSLQTLPSVPSLQK--LSPEALNLSVSHLCVATLKPR--PVHINCLAVSADSLYAASGY 116

Query: 794 EINVFDLTNYTHLDXXXXXXXXXXXXXXSK--DGKVFTAHQDCKIRVWFHTSTKRHQQHQ 621
           +I+VFDL NY HLD                  DGK+FT+HQ+ KIRVW  T +KRHQ   
Sbjct: 117 QIHVFDLKNYAHLDAFNTDDSSSGSVKSLAFCDGKIFTSHQNGKIRVWQMTISKRHQ--- 173

Query: 620 HQLIATLPTVQDRLHRFVLPRNYVSIRRHKKRLWIDHVDAVSGLEVSNGLIYSVSWDKYL 441
             L+ATLPTV DRL  F+LP+NYVS+RRHKKRLWIDH DAVSGL VS+G I SVSWDK  
Sbjct: 174 --LVATLPTVNDRLRHFMLPKNYVSVRRHKKRLWIDHADAVSGLSVSDGFICSVSWDKCF 231

Query: 440 KIWSSKDLVCLESVKAHEDAVNALVVSKDGTVYTGSADTRIRVWAKAAVSFGDNKKQKRQ 261
           KIW + DL CLESVKAH+DAVNA+ +S +G +YTGSAD RI+VWAKA+           +
Sbjct: 232 KIWRASDLRCLESVKAHQDAVNAVAISGNGIIYTGSADCRIKVWAKAS---------GEK 282

Query: 260 RHRLIATLEKHKSAINALAISHDGSVLFSGACDRSILVWEREHSAHHMVVTGALRGHRGA 81
           RH ++ATLEKHKSA+NALA++ DGS+LFSGACDRSILVWERE SA+HMVVTGALRGH  A
Sbjct: 283 RHTVVATLEKHKSAVNALALTGDGSILFSGACDRSILVWEREDSANHMVVTGALRGHSKA 342

Query: 80  ILCLVNI 60
           ILCL+++
Sbjct: 343 ILCLISV 349


>ref|XP_002314580.1| predicted protein [Populus trichocarpa] gi|222863620|gb|EEF00751.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  354 bits (909), Expect = 2e-95
 Identities = 202/372 (54%), Positives = 238/372 (63%), Gaps = 12/372 (3%)
 Frame = -3

Query: 1139 MKVRPWFPICSSVSCTNSTCDAT-----TDPAPPQ---KTTPYRXXXXXXXXXXXXXXXX 984
            M+VR W    +S   TNST D+T         PP+     T                   
Sbjct: 1    MRVRSWL---ASTCATNSTLDSTFSFSNNQSQPPKHLASDTSSSSNSTPSTTSTATSSVS 57

Query: 983  XXSNLSLQTLPSVPSLQNTLLDHTSPTIFLSYHCLFSFKPQTWPVIVSCLAISGKLLYAA 804
              SNLSLQTLPSVPSLQ      T  T+ +S  C+ S KPQ   + ++CL +   LLYAA
Sbjct: 58   LQSNLSLQTLPSVPSLQKI----TPETLNVSSLCINSLKPQQNHLPITCLVVQDNLLYAA 113

Query: 803  SGNEINVFDLTNYTHLDXXXXXXXXXXXXXXSK--DGKVFTAHQDCKIRVWFHTSTKRHQ 630
            S +EINV+D TN + +D                  DGK+FTAHQDCKIR W  +ST +H 
Sbjct: 114  SSHEINVYDRTNLSLVDSFNDKDSSLGSVKSVSFCDGKIFTAHQDCKIRAWKISSTTKH- 172

Query: 629  QHQHQLIATLPTVQDRLHRFVLPRNYVSIRRHKKRLWIDHVDAVSGLEVS--NGLIYSVS 456
               H+L+  LPT+ DRL RFVLP+NYV++RRHKK LWI H DAV+GL V+  NGLIYSVS
Sbjct: 173  ---HKLVTVLPTLNDRLRRFVLPKNYVNVRRHKKLLWIKHADAVTGLAVNDNNGLIYSVS 229

Query: 455  WDKYLKIWSSKDLVCLESVKAHEDAVNALVVSKDGTVYTGSADTRIRVWAKAAVSFGDNK 276
            WDK LKIW + DL CLES+KAHEDAVNA+ VS DG VYTGSAD RIRVW K         
Sbjct: 230  WDKSLKIWRASDLQCLESIKAHEDAVNAVAVSVDGMVYTGSADCRIRVWGKPL------- 282

Query: 275  KQKRQRHRLIATLEKHKSAINALAISHDGSVLFSGACDRSILVWEREHSAHHMVVTGALR 96
                +RH L+ATLEKHKSA+NALA+  DGSVLFSGACDRSILVWERE SA+HMVVTGALR
Sbjct: 283  --NEKRHVLVATLEKHKSAVNALALKDDGSVLFSGACDRSILVWEREDSANHMVVTGALR 340

Query: 95   GHRGAILCLVNI 60
            GH  AIL L+N+
Sbjct: 341  GHNKAILSLINV 352


>ref|XP_003532807.1| PREDICTED: myosin heavy chain kinase B-like [Glycine max]
          Length = 431

 Score =  342 bits (876), Expect = 1e-91
 Identities = 192/383 (50%), Positives = 241/383 (62%), Gaps = 23/383 (6%)
 Frame = -3

Query: 1139 MKVRPWFPICSSVSCTNST--------------CD-----ATTDPAPPQKTTPYRXXXXX 1017
            M+++ W   CSS +C  +T              CD     ++   AP   TT        
Sbjct: 1    MRIQWWLNTCSSANCATATHHSTISLPKQKEHACDDSISYSSISEAPASSTTSNNSTSSL 60

Query: 1016 XXXXXXXXXXXXXSNLSLQTLPSVPSLQNTLLDHTSPTIFLSYHCLFSFKPQTWPVIVSC 837
                          NLS+QTLPSVPSLQ+  L   + T  +S+HC+ + +P     + S 
Sbjct: 61   ES------------NLSIQTLPSVPSLQS--LSPQNFTFSVSHHCVTTLEPHLSRPVTS- 105

Query: 836  LAISGKLLYAASGNEINVFDLTNYTHLDXXXXXXXXXXXXXXS----KDGKVFTAHQDCK 669
            LA++  LLYAA+ +EINV+D    T +               +     +  V T HQDCK
Sbjct: 106  LAVNNNLLYAATDHEINVYDRHTCTTIHAFNTQPTSTSNSTKTIAFSNNNTVITTHQDCK 165

Query: 668  IRVWFHTSTKRHQQHQHQLIATLPTVQDRLHRFVLPRNYVSIRRHKKRLWIDHVDAVSGL 489
            IRVW     + H+   H+++ATLPTV DRLHRF+LP+NYV+IRRH+KRLWI+H DAV+GL
Sbjct: 166  IRVW-----QNHKNIHHRMLATLPTVNDRLHRFLLPKNYVAIRRHEKRLWIEHADAVTGL 220

Query: 488  EVSNGLIYSVSWDKYLKIWSSKDLVCLESVKAHEDAVNALVVSKDGTVYTGSADTRIRVW 309
             VSNG IYSVSWD+ LKIW   D  C+ES+KAHEDAVNA+ VS DGTVYTGSAD RIRVW
Sbjct: 221  AVSNGAIYSVSWDRTLKIWRLSDFRCVESLKAHEDAVNAVAVSNDGTVYTGSADKRIRVW 280

Query: 308  AKAAVSFGDNKKQKRQRHRLIATLEKHKSAINALAISHDGSVLFSGACDRSILVWEREHS 129
            A+ A           +RH L+ATLEKHKSA+NALA++ D SVLFSGACDRSILVWERE S
Sbjct: 281  ARPA---------GEKRHVLVATLEKHKSAVNALALNDDASVLFSGACDRSILVWEREDS 331

Query: 128  AHHMVVTGALRGHRGAILCLVNI 60
            A+HMVV+GALRGH+ AILCLVN+
Sbjct: 332  ANHMVVSGALRGHQKAILCLVNV 354


>ref|XP_002515050.1| F-box and wd40 domain protein, putative [Ricinus communis]
            gi|223546101|gb|EEF47604.1| F-box and wd40 domain
            protein, putative [Ricinus communis]
          Length = 438

 Score =  335 bits (858), Expect = 2e-89
 Identities = 197/374 (52%), Positives = 238/374 (63%), Gaps = 14/374 (3%)
 Frame = -3

Query: 1139 MKVRPWFPI-CSSVSCTNSTCDATT---------DPAPPQKTTPYRXXXXXXXXXXXXXX 990
            MKVR W    CSS + T +    TT         D +    ++P                
Sbjct: 1    MKVRSWLATTCSSTTTTATATQNTTFSSAKHLYSDTSSASDSSP-----------ATSSM 49

Query: 989  XXXXSNLSLQTLPSVPSLQNTLLDHTSPTIFLSYHCLFSFK--PQTWPVIVSCLAISGKL 816
                SNLSLQTLPSVPSLQ   L   +  + +SYH   S K  P    + ++CLA+   L
Sbjct: 50   SSLQSNLSLQTLPSVPSLQK--LTPETLNVSISYHSTTSLKLIPN---LQITCLALHDNL 104

Query: 815  LYAASGNEINVFDLTNYTHLDXXXXXXXXXXXXXXSK--DGKVFTAHQDCKIRVWFHTST 642
            LYAAS + +NV+D T   HL                   +GK+FTAHQDCKIRVW     
Sbjct: 105  LYAASTHIVNVYDRTTCHHLHSFSANNSSSGSIKSITFCNGKIFTAHQDCKIRVW----- 159

Query: 641  KRHQQHQHQLIATLPTVQDRLHRFVLPRNYVSIRRHKKRLWIDHVDAVSGLEVSNGLIYS 462
            K  Q +QH+L+  LPTV+DRL + +LP+NYV++RRHKK LWI H DAV+ L V+NG IYS
Sbjct: 160  KLIQNYQHKLLTVLPTVKDRLSKSMLPKNYVNVRRHKKMLWIQHADAVTSLAVNNGFIYS 219

Query: 461  VSWDKYLKIWSSKDLVCLESVKAHEDAVNALVVSKDGTVYTGSADTRIRVWAKAAVSFGD 282
            VSWDK LKIW + DL CLESVKAHEDA+NA+VVS +GTVYTGSAD +IRVWAK      D
Sbjct: 220  VSWDKCLKIWRASDLRCLESVKAHEDAINAVVVSVNGTVYTGSADCKIRVWAKPL----D 275

Query: 281  NKKQKRQRHRLIATLEKHKSAINALAISHDGSVLFSGACDRSILVWEREHSAHHMVVTGA 102
             KK     H L+ATLEKHKSA+NALA++ DGSVLFSGACDRSILVWERE SA+HMVV+GA
Sbjct: 276  GKK-----HTLVATLEKHKSAVNALALNDDGSVLFSGACDRSILVWEREDSANHMVVSGA 330

Query: 101  LRGHRGAILCLVNI 60
            LRGH  AIL L+N+
Sbjct: 331  LRGHGKAILSLINV 344


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