BLASTX nr result

ID: Coptis23_contig00014437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014437
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_180244.1| cyclin-B1-4 [Arabidopsis thaliana] gi|75277932|...    62   5e-08
ref|XP_002298451.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002879008.1| CYCB1_4 [Arabidopsis lyrata subsp. lyrata] g...    61   1e-07
ref|XP_003617201.1| Cyclin [Medicago truncatula] gi|355518536|gb...    60   1e-07
ref|XP_002268488.1| PREDICTED: G2/mitotic-specific cyclin-1 [Vit...    60   1e-07

>ref|NP_180244.1| cyclin-B1-4 [Arabidopsis thaliana]
           gi|75277932|sp|O48790.1|CCB14_ARATH RecName:
           Full=Cyclin-B1-4; AltName: Full=G2/mitotic-specific
           cyclin-B1-4; Short=CycB1;4 gi|2760842|gb|AAB95310.1|
           putative cyclin [Arabidopsis thaliana]
           gi|15292695|gb|AAK92716.1| putative cyclin [Arabidopsis
           thaliana] gi|50198987|gb|AAT70494.1| At2g26760
           [Arabidopsis thaliana] gi|330252789|gb|AEC07883.1|
           cyclin-B1-4 [Arabidopsis thaliana]
          Length = 387

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 164 KHEEIWAPEVNDFVCIVDNAYGRAQILAMEKLIL 63
           K+EEIWAPEVNDFVCI DNAY R Q+LAMEK IL
Sbjct: 217 KYEEIWAPEVNDFVCISDNAYNRKQVLAMEKSIL 250


>ref|XP_002298451.1| predicted protein [Populus trichocarpa] gi|222845709|gb|EEE83256.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 164 KHEEIWAPEVNDFVCIVDNAYGRAQILAMEKLIL 63
           K+EEIWAPEVNDFVCI DNAY R Q+LAMEK IL
Sbjct: 138 KYEEIWAPEVNDFVCISDNAYTREQVLAMEKAIL 171


>ref|XP_002879008.1| CYCB1_4 [Arabidopsis lyrata subsp. lyrata]
           gi|297324847|gb|EFH55267.1| CYCB1_4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 385

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 164 KHEEIWAPEVNDFVCIVDNAYGRAQILAMEKLIL 63
           K+E+IWAPEVNDFVCI DNAY R Q+LAMEK IL
Sbjct: 215 KYEDIWAPEVNDFVCISDNAYSRKQVLAMEKSIL 248


>ref|XP_003617201.1| Cyclin [Medicago truncatula] gi|355518536|gb|AET00160.1| Cyclin
           [Medicago truncatula]
          Length = 421

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 164 KHEEIWAPEVNDFVCIVDNAYGRAQILAMEKLILK 60
           K+EEIWAPEVNDFVCI DNAY R Q+L MEK IL+
Sbjct: 252 KYEEIWAPEVNDFVCISDNAYVREQVLVMEKTILR 286


>ref|XP_002268488.1| PREDICTED: G2/mitotic-specific cyclin-1 [Vitis vinifera]
           gi|296083932|emb|CBI24320.3| unnamed protein product
           [Vitis vinifera]
          Length = 460

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = -3

Query: 164 KHEEIWAPEVNDFVCIVDNAYGRAQILAMEKLIL 63
           K+EEIWAPEVNDFVCI DNAY R QIL MEK IL
Sbjct: 292 KYEEIWAPEVNDFVCISDNAYAREQILQMEKSIL 325


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