BLASTX nr result

ID: Coptis23_contig00014433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014433
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511539.1| conserved hypothetical protein [Ricinus comm...   117   8e-25
ref|XP_002273979.1| PREDICTED: uncharacterized protein LOC100241...   115   4e-24
emb|CAN62104.1| hypothetical protein VITISV_033313 [Vitis vinifera]   115   4e-24
ref|XP_003523039.1| PREDICTED: uncharacterized protein LOC100815...   107   8e-22
emb|CCM07276.1| Putative expressed protein [Musa balbisiana]          105   4e-21

>ref|XP_002511539.1| conserved hypothetical protein [Ricinus communis]
           gi|223550654|gb|EEF52141.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 357

 Score =  117 bits (294), Expect = 8e-25
 Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = -1

Query: 288 RERAASNVSKSVSVLDLSGKEKS-AKPPRRLSIPSKSAVSPLPRPTGTITPISETRMKRL 112
           R R+  +VS+S+ VLDL GKEKS AKPPRRLS+P KS V+   +P GTITPISE R KR 
Sbjct: 48  RARSVPSVSRSMGVLDLPGKEKSSAKPPRRLSVPIKSGVAATAKPLGTITPISEARAKRS 107

Query: 111 TTGQGRSGTPSSDVTKSINQRKFSVLYSASYWLSQIK 1
           T GQG+S TP SDV+++ +++KF+ L S+SYWLSQIK
Sbjct: 108 TNGQGKSETPLSDVSRTSSRKKFNALASSSYWLSQIK 144


>ref|XP_002273979.1| PREDICTED: uncharacterized protein LOC100241687 [Vitis vinifera]
           gi|297734009|emb|CBI15256.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/96 (63%), Positives = 71/96 (73%)
 Frame = -1

Query: 288 RERAASNVSKSVSVLDLSGKEKSAKPPRRLSIPSKSAVSPLPRPTGTITPISETRMKRLT 109
           R R  S VS+SVSVLD S K+ +AKPPRR SIP+KS VSP  +P G ITPISETR KR  
Sbjct: 45  RGRIVSKVSQSVSVLDSSTKDTAAKPPRRFSIPAKSNVSPHMKPAGNITPISETRAKRSV 104

Query: 108 TGQGRSGTPSSDVTKSINQRKFSVLYSASYWLSQIK 1
           T QG+  TP SDV+KS N+R  S + SA+YWLSQIK
Sbjct: 105 TNQGKIATPVSDVSKSGNRRNSSYISSATYWLSQIK 140


>emb|CAN62104.1| hypothetical protein VITISV_033313 [Vitis vinifera]
          Length = 233

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/96 (63%), Positives = 71/96 (73%)
 Frame = -1

Query: 288 RERAASNVSKSVSVLDLSGKEKSAKPPRRLSIPSKSAVSPLPRPTGTITPISETRMKRLT 109
           R R  S VS+SVSVLD S K+ +AKPPRR SIP+KS VSP  +P G ITPISETR KR  
Sbjct: 69  RGRIVSKVSQSVSVLDSSTKDTAAKPPRRFSIPAKSNVSPHMKPAGNITPISETRAKRSV 128

Query: 108 TGQGRSGTPSSDVTKSINQRKFSVLYSASYWLSQIK 1
           T QG+  TP SDV+KS N+R  S + SA+YWLSQIK
Sbjct: 129 TSQGKIATPVSDVSKSGNRRNSSYISSATYWLSQIK 164


>ref|XP_003523039.1| PREDICTED: uncharacterized protein LOC100815390 [Glycine max]
          Length = 361

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/98 (59%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = -1

Query: 288 RERAASNVSKSVSVLDLSGKEKS--AKPPRRLSIPSKSAVSPLPRPTGTITPISETRMKR 115
           R   AS+VSKSVSVLD SGK+KS  AKPPRRLSIP+K+  +  P+  G  TPI+ETR  R
Sbjct: 55  RSVGASSVSKSVSVLDFSGKDKSGSAKPPRRLSIPAKTPATSRPKLGGNSTPITETRTGR 114

Query: 114 LTTGQGRSGTPSSDVTKSINQRKFSVLYSASYWLSQIK 1
              GQGRS TP SD++K+ ++ K ++L SASYWL+QIK
Sbjct: 115 SAFGQGRSKTPISDISKTSSRTKLNLLTSASYWLNQIK 152


>emb|CCM07276.1| Putative expressed protein [Musa balbisiana]
          Length = 349

 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/96 (61%), Positives = 74/96 (77%)
 Frame = -1

Query: 288 RERAASNVSKSVSVLDLSGKEKSAKPPRRLSIPSKSAVSPLPRPTGTITPISETRMKRLT 109
           R R++  VSKSV+VLDLSGK+KSAKP RRLSIP+K+A  P   P  ++TPISE R  R+ 
Sbjct: 49  RGRSSPAVSKSVNVLDLSGKDKSAKPSRRLSIPTKTAHPP---PIKSMTPISEAR-ARIF 104

Query: 108 TGQGRSGTPSSDVTKSINQRKFSVLYSASYWLSQIK 1
             QG+S TP SDV+KS+ +RKF+VL S SYWL+QIK
Sbjct: 105 NIQGKSDTPRSDVSKSMTKRKFNVLSSVSYWLTQIK 140


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